>MN908947 NC_045512 EPI_ISL_402125,2019-12-30,Wuhan-Hu-1,China / Hubei / Wuhan >MN938384 EPI_ISL_406030,2020-01-10,2019-nCoV_HKU-SZ-002a_2020,China / Guangdong / Shenzhen ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C8782T T28144C C29095T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MN975262 EPI_ISL_405839,2020-01-11,2019-nCoV_HKU-SZ-005b_2020,China / Guangdong / Shenzhen C8782T C9561T T15607C T28144C C29095T AAAAAAAAAAAA29892- >MN985325 EPI_ISL_404895,2020-01-19,2019-nCoV/USA-WA1/2020,United States / Washington / Snohomish County C8782T C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MN988668 EPI_ISL_406716,2020-01-02,2019-nCoV WHU01,China / Hubei / Wuhan A1- AAAAAAAAAAAAAAAAAAAAA29883- >MN988669 EPI_ISL_406717,2020-01-02,2019-nCoV WHU02,China / Hubei / Wuhan A1- AAAAAAAAAAAAAAAAAAAAA29883- >MN988713 EPI_ISL_404253,2020-01-21,2019-nCoV/USA-IL1/2020,United States / Illinois /Chicago T490W C3177Y C8782Y C24034Y T26729Y G28077S T28144Y C28854Y AAAAAAAAAAAAAAAAAAAAA29883- >MN994467 EPI_ISL_406034,2020-01-23,2019-nCoV/USA-CA1/2020,United States / California / Los Angeles G1548A C8782T C24034T T26729C G28077C T28144C A28792T AAAAAAAAAAAAAAAAAAAAA29883- >MN994468 EPI_ISL_406036,2020-01-22,2019-nCoV/USA-CA2/2020,United States / California / Orange County C17000T G26144T AAAAAAAAAAAAAAAAAAAA29884- >MN997409 EPI_ISL_406223,2020-01-22,2019-nCoV/USA-AZ1/2020,United States / Arizona / Phoenix C8782T G11083T T28144C C29095T AAAAAAAAAAAAAAAAAAAAA29883- >MT007544 EPI_ISL_406844,2020-01-25,BetaCoV/Australia/VIC01/2020,Australia / Victoria / Clayton T19065C T22303G G26144T CGATCGAGTG29750- >MT012098 EPI_ISL_413522,2020-01-27,SARS-CoV-2/29/human/2020/IND,India / Kerala State ATTAAAGGTTTAT1- T2277C C6695T C14657T C17373T TTA21991- G22785T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT020781 ,2020-01-29,nCoV-FIN-29-Jan-2020,Finland A1C C21707T TGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29807- >MT020880 EPI_ISL_407214,2020-01-25,BetaCoV/USA/WA1-A12/2020,United States / Washington C8782T C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT020881 EPI_ISL_407215,2020-01-25,BetaCoV/USA/WA1-F6/2020,United States / Washington C8782T C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT027062 EPI_ISL_408008,2020-01-29,2019-nCoV/USA-CA3/2020,United States / California G614A A5084G C28854T AAAAAAAAAAAAAAAAAAAAA29883- >MT027063 EPI_ISL_408009,2020-01-29,2019-nCoV/USA-CA4/2020,United States / California G614A A5084G C28854T AAAAAAAAAAAAAAAAAAAAA29883- >MT027064 EPI_ISL_408010,2020-01-29,2019-nCoV/USA-CA5/2020,United States / California C2091T C21707T AAAAAAAAAAAAAAAAAAAAA29883- >MT039874 EPI_ISL_450444,2020-01-22,SARS-CoV-2/human/CHN/IME-HZ01/2020,China ATTAAAGGTTTA1- AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT039887 EPI_ISL_408670,2020-01-31,2019-nCoV/USA-WI1/2020,United States / Wisconsin C17373T ATT20298- AAAAAAAAAAAAAAAAAAAAA29883- >MT039888 EPI_ISL_409067,2020-01-29,2019-nCoV/USA-MA1/2020,United States / Massachusetts G3518T G5480R A17423G C24034T C28854T AAAAAAAAAAAAAAAAAAAAA29883- >MT039890 EPI_ISL_411929,2020-01,SNU01,South Korea G2971T C6031T C12115T T15597C C20936T C22224G G25775T G26144T T26354A >MT044257 EPI_ISL_410045,2020-01-28,SARS-CoV-2/IL2/human/2020/USA,United States / Illinois T490A C3177T C8782T C24034T T26729C G28077C T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT044258 EPI_ISL_410044,2020-01-27,SARS-CoV-2/CA6/human/2020/USA,United States / California TGGTCATGTTATGGT508- AAGTCATTT686- AAAAAAAAAAAAAAAAAAAAA29883- >MT049951 ,2020-01-17,SARS-CoV-2/Yunnan-01/human/2020/CHN,China / Yunnan C75A C8782T G11083C T21644A T28144C >MT050493 EPI_ISL_413523,2020-01-31,SARS-CoV-2/166/human/2020/IND,India / Kerala State ATTAAAGGTTTATACCTTCC1- A1691G C6501T C8782T C16877T C24351T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT066156 ,2020-01-30,SARS-CoV-2/INMI1/human/2020/ITA,Italy A2269T G26144T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT066175 EPI_ISL_408489,2020-01-31,Taiwan/NTU01/2020,China / Taiwan / Taipei C8782T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT066176 EPI_ISL_410218,2020-02-05,BetaCov/Taiwan/NTU02/2020,China / Taiwan / Taipei A9034G C9491T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT072688 EPI_ISL_410301,2020-01-13,SARS0CoV-2/61-TW/human/2020/ NPL,Nepal / Kathmandu ATTAAAGGTTTATAC1- C24034T AGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29827- >MT077125 ,2020-01-31,SARS-CoV-2/human/ITA/INMI1/2020,Italy ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- G11083T G26144T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT079843 EPI_ISL_449476,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV001/2020,China -A1ACTGAG AA3GG G6C T9G A11G ACCT13TTTC -19GTTGAAA C2535T C8781T T8885C T28143C >MT079844 EPI_ISL_449477,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV002/2020,China A1- TA3CG -7AGTTGGTT A12G AC14TA T17C CCC19GGG G23A TA25GT C28T C2536T C8782T T8886C T28144C >MT079845 EPI_ISL_449478,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV003/2020,China -1CTACAAGAG TA3CG -7AGTTGGTT C8782T T18996C C24370T T28144C T29029C -29835GTGAGATTAAAAGTTAA CC29836TA G29841C GA29843AC T29847G AA29849GC GC29853TG TC29856AG G29861C -G29868TCATTCTGC A29872G AA29874GT A29877G AA29879CT A29882T A29884T -29886TCGT AAA29889CGG AAA29896GCG -29903CGTTTA >MT079846 EPI_ISL_449479,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV004/2020,China -A1CGAAAGT TAAA2GGTT A11G AC13TA T16C CCC18GGG G22A TA24GT C27T C2535T C8781T T8885C T28143C -29834GTGAGATTAAAGTTAA CC29835TA G29840C GA29842AC T29846G AA29848GC GC29852TG TC29855AG G29860C -G29867TCATTCTGC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871G- >MT079847 EPI_ISL_449480,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV005/2020,China ATTAAA1---GTT C8782T C10626T T28144C CCCCATG29835GTGAGAT G29843A TT29845AG TAG29851CTA T29855A -29859ACTTGTGC G29861T AGAA29863TAGT GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT079848 EPI_ISL_449481,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV006/2020,China ATTAAAGGTT1- A12G ACC14GTT -20TCGTTGAAA C8782T T28144C -29835GTGAGATTAAAGTTAA CC29836TA G29841C GA29843AC T29847G AA29849GC GC29853TG TC29856AG G29861C ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT079849 EPI_ISL_449482,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV007/2020,China -A1GT TAAA2GGTT A11G AC13TA T16C CCC18GGG G22A TA24GT C27T C8781T G16324C T28143C >MT079850 EPI_ISL_449483,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV008/2020,China -1G TAA3CGG -7AAGTTGGTT C2536T C8782T T8886C T28144C TAG29826GGT CCCCATG29835GTGAGAT G29843A TT29845AG TAG29851CTA T29855A -29859ACTTGTGC G29861T AGAA29863TAGT GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT079851 EPI_ISL_449484,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV011/2020,China C8782T T28144C -29904CCGAAAGCTTGTGTTACATTGTATGCTTTAGTGGCAGTACGTTTTTTGCCGAGGCTTCTTAGAAGCCTCAGCAGCAGATTTCTTAGTGACAGTTTGGCCTTGTTGTTGTTGGCCT >MT079852 EPI_ISL_449485,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV012/2020,China -A1AACCTGTAAAACAGGCAAACTGAG AA3GG G6C T9G A11G ACCT13TTTC -19GTTGAAA T24G AC26CA AA29GG CAA32TCT -37ATCTT A38C C8781T T28143C CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT079853 EPI_ISL_449486,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV020/2020,China ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCAT1- C2536T C8782T T8886C T28144C A29876G A29879G A-------------------------29882GGCTGATGAAACTCAAGCCTTACCGC A29884G A29886G A29888C A29890G A29893G A29897C AA29899GC -29904CTGTGACTCTTCTTCCTGCTGCAGATTTGGATGATTTCTCCAAACAATTGCAACAATCCATG >MT079854 EPI_ISL_449487,2020-01-22,SARS-CoV-2/human/CHN/WHUHnCoV021/2020,China -A1CGAACCTGTAAAACAGGCAAACTGAG AA3GG G6C T9G A11G ACCT13TTTC CCA19GTT GT23AA A26C AA-------------29GGGACAAGGCTCTCC C17248T C17893T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29859- >MT093571 EPI_ISL_411951,2020-02-07,SARS-CoV-2/01/human/2020/SWE,Sweden G2717A A9274G CT13225GC A17376G T23952G G26144T AAAAAAAAAAAAAAAAA29887- >MT093631 EPI_ISL_411957,2020-01-08,SARS-CoV-2/WH-09/human/2020/CHN,China ATTAAAGGTTTAT1- C186T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT106052 EPI_ISL_411954,2020-02-06,2019-nCoV/USA-CA7/2020,United States / California C8782T T28144C G28878A G29742A AAAAAAAAAAAAAAAAAAAAA29883- >MT106053 EPI_ISL_411955,2020-02-10,2019-nCoV/USA-CA8/2020,United States / California A24325G AAAAAAAAAAAAAAAAAAAAA29883- >MT106054 EPI_ISL_411956,2020-02-11,2019-nCoV/USA-TX1/2020,United States / Texas C8782T T18603C T18975A A19175C C27925T T28144C C29095T AAAAAAAAAAAAAAAAAAAAA29883- >MT114412 EPI_ISL_434563,2020-01-23,SARS-CoV-2/human/HKG/HKU-902a/2020,China / Hong Kong AT1- T28861C AAAAAAAAAAAA29892- >MT114413 EPI_ISL_434564,2020-01-24,SARS-CoV-2/human/HKG/HKU-902b/2020,China / Hong Kong T28861C AAAAAAAAAAAA29892- >MT114414 EPI_ISL_434565,2020-01-24,SARS-CoV-2/human/HKG/HKU-903a/2020,China / Hong Kong G1397A G11083T T28688C G29742T AAAAAAAAAAAA29892- >MT114415 EPI_ISL_434566,2020-01-27,SARS-CoV-2/human/HKG/HKU-903b/2020,China / Hong Kong G1397A G11083T T28688C G29742T AAAAAAAAAAAA29892- >MT114416 EPI_ISL_434567,2020-01-27,SARS-CoV-2/human/HKG/HKU-907a/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGG1- C6501T C8782T T28144C AAAAAAAAAAAA29892- >MT114417 EPI_ISL_434568,2020-01-29,SARS-CoV-2/human/HKG/HKU-907b/2020,China / Hong Kong C6501T C8782T T28144C AAAAAAAAAAAA29892- >MT114418 EPI_ISL_434569,2020-01-27,SARS-CoV-2/human/HKG/HKU-908a/2020,China / Hong Kong C8092T G11083T AAAAAAAAAAAA29892- >MT114419 EPI_ISL_434570,2020-01-29,SARS-CoV-2/human/HKG/HKU-908b/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGG1- C8092T G11083T AAAAAAAAAAAAAAAA29888- >MT118835 EPI_ISL_412862,2020-02-23,2019-nCoV/USA-CA9/2020,United States / California / Solano C9924T AAAAAAAAAAAAAAAAAAAAA29883- >MT121215 EPI_ISL_414510,2020-02-02,SARS-CoV-2/SH01/human/2020/CHN,China / Shanghai C6026T C12473T -29904AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >MT123290 EPI_ISL_412966,2020-02-05,SARS-CoV-2/IQTC01/human/2020/CHN,China / Guangdong / Guangzhou -A1GTTC A3T C15323T C29302T AA29883GG A29886G AAAAAAAAAAAAAAA29888- >MT123291 EPI_ISL_412967,2020-01-29,SARS-CoV-2/IQTC02/human/2020/CHN,China / Guangdong / Guangzhou ATT1- G6819T C17373T C19610T G29527A AAAAAAAAAAAAAAAAAA29886- >MT123292 ,2020-01-27,SARS-CoV-2/IQTC04/human/2020/CHN,China / Guangdong / Guangzhou A1C C8782T C12534T C13072T T28144C A29873T AAA29876GGT AAA29880GCG -29886TTCCTTGTCAACTAATTATTGACCTGC AA29887CG AAAAAAAAAAAA29892GGCGC- >MT123293 ,2020-01-29,SARS-CoV-2/IQTC03/human/2020/CHN,China / Guangdong / Guangzhou ATTAAA1- G654A G6819T T6996C C17373T G29527A AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT126808 ,2020-02-28,SARS-CoV-2/SP02/human/2020/BRA,Brazil G11083T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT135041 EPI_ISL_413518,2020-01-26,SARS-CoV-2/105/human/2020/CHN,China / Beijing T4402C G5062T C8782T T28144C >MT135042 EPI_ISL_413519,2020-01-28,SARS-CoV-2/231/human/2020/CHN,China / Beijing T4402C G5062T C8782T T28144C >MT135043 EPI_ISL_413520,2020-01-28,SARS-CoV-2/233/human/2020/CHN,China / Beijing T4402C G5062T C8782T T28144C A29301T >MT135044 EPI_ISL_413521,2020-01-28,SARS-CoV-2/235/human/2020/CHN,China / Beijing T4402C G5062T C8782T T28144C >MT152824 EPI_ISL_412970,2020-02-24,BetaCoV/USA/WA2/2020,United States / Washington / Snohomish County AT1- C5784T C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAA29881- >MT159705 EPI_ISL_413612,2020-02-17,2019-nCoV/USA-CruiseA-7/2020,United States C3738T G11410A C26326T AAAAAAAAAAAAAAAAAAAAA29883- >MT159706 EPI_ISL_413613,2020-02-17,2019-nCoV/USA-CruiseA-8/2020,United States C9474T AAAAAAAAAAAAAAAAAAAAA29883- >MT159707 EPI_ISL_413615,2020-02-17,2019-nCoV/USA-CruiseA-10/2020,United States G3259T AAAAAAAAAAAAAAAAAAAAA29883- >MT159708 EPI_ISL_413616,2020-02-17,2019-nCoV/USA-CruiseA-11/2020,United States C10036T AAAAAAAAAAAAAAAAAAAAA29883- >MT159709 EPI_ISL_413617,2020-02-20,2019-nCoV/USA-CruiseA-12/2020,United States C29635T AAAAAAAAAAAAAAAAAAAAA29883- >MT159710 EPI_ISL_413614,2020-02-17,2019-nCoV/USA-CruiseA-9/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159711 EPI_ISL_413618,2020-02-20,2019-nCoV/USA-CruiseA-13/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159712 EPI_ISL_413619,2020-02-25,2019-nCoV/USA-CruiseA-14/2020,United States C6636T C11750T C11956T AAAAAAAAAAAAAAAAAAAAA29883- >MT159713 EPI_ISL_413620,2020-02-18,2019-nCoV/USA-CruiseA-15/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159714 EPI_ISL_413621,2020-02-18,2019-nCoV/USA-CruiseA-16/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159715 EPI_ISL_413622,2020-02-24,2019-nCoV/USA-CruiseA-17/2020,United States A5845T AAAAAAAAAAAAAAAAAAAAA29883- >MT159716 EPI_ISL_413623,2020-02-24,2019-nCoV/USA-CruiseA-18/2020,United States TGGTCATGTTATGGT508- C22033A AAAAAAAAAAAAAAAAAAAAA29883- >MT159717 EPI_ISL_413606,2020-02-17,2019-nCoV/USA-CruiseA-1/2020,United States C3099T G28378T AAAAAAAAAAAAAAAAAAAAA29883- >MT159718 EPI_ISL_413607,2020-02-18,2019-nCoV/USA-CruiseA-2/2020,United States C28409T G29736T AAAAAAAAAAAAAAAAAAAAA29883- >MT159719 EPI_ISL_413608,2020-02-18,2019-nCoV/USA-CruiseA-3/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159720 EPI_ISL_413609,2020-02-21,2019-nCoV/USA-CruiseA-4/2020,United States C1385T C29230T C29635T AAAAAAAAAAAAAAAAAAAAA29883- >MT159721 EPI_ISL_413610,2020-02-21,2019-nCoV/USA-CruiseA-5/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT159722 EPI_ISL_413611,2020-02-21,2019-nCoV/USA-CruiseA-6/2020,United States G11410A C26326T AAAAAAAAAAAAAAAAAAAAA29883- >MT163716 EPI_ISL_413025,2020-02-27,SARS-CoV-2/WA3-UW1/human/2020/USA,United States / Washington A1T AC35TT T2446C C3411T G5572T G11083T C14805T G26144T G29864A TG29867AA C29870A >MT163717 EPI_ISL_413455,2020-02-28,SARS-CoV-2/WA4-UW2/human/2020/USA,United States / Washington ATTAAA1- C8782T C17747T A17858G C18060T T28144C TG29867AA C29870A >MT163718 EPI_ISL_413457,2020-02-29,SARS-CoV-2/WA6-UW3/human/2020/USA,United States / Washington A1T TAAA3GGTT C20S C8782T C17747T A17858G C18060T T28144C >MT163719 EPI_ISL_413458,2020-03-01,SARS-CoV-2/WA7-UW4/human/2020/USA,United States / Washington C8782T C17747T A17858G C18060T T20281C T28144C >MT163720 EPI_ISL_413486,2020-03-01,SARS-CoV-2/WA8-UW5/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAAC1- A3406C C5784T C8782T C17747T A17858G C18060T C23525T T28144C >MT163721 EPI_ISL_413487,2020-03-01,SARS-CoV-2/WA9-UW6/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTG1- C5784T C8782T C17747T A17858G C18060T G20580T G26730A T28144C G29864A TG29867AA C29870A >MT184907 EPI_ISL_414479,2020-02-18,2019-nCoV/USA-CruiseA-19/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT184908 EPI_ISL_414480,2020-02-21,2019-nCoV/USA-CruiseA-21/2020,United States C254T A8312W A29596W G29736T G29751C AAAAAAAAAAAAAAAAAAAAAAA29881- >MT184909 EPI_ISL_414481,2020-02-21,2019-nCoV/USA-CruiseA-22/2020,United States AAAAAAAAAAAAAAAAAAAAA29883- >MT184910 EPI_ISL_414482,2020-02-18,2019-nCoV/USA-CruiseA-23/2020,United States C254T C1911Y T9157C G11083T G22104T G29736T G29751C AAAAAAAAAAAAAAAAAAAAA29883- >MT184911 EPI_ISL_414483,2020-02-17,2019-nCoV/USA-CruiseA-24/2020,United States C1063Y C3099T C10083Y C10507T G11083T G15193S G15586K C15810Y C28253Y G28378T AAAAAAAAAAAAAAAAAAAAA29883- >MT184912 EPI_ISL_414484,2020-02-17,2019-nCoV/USA-CruiseA-25/2020,United States G11083T AAAAAAAAAAAAAAAAAAAAA29883- >MT184913 EPI_ISL_414485,2020-02-24,2019-nCoV/USA-CruiseA-26/2020,United States G11083T C12513Y T20988Y C25587Y C28367Y G28916A AAAAAAAAAAAAAAAAAAAAA29883- >MT186683 EPI_ISL_434560,2020-01,SARS-CoV-2/human/HKG/HK20/2020,China / Hong Kong T13929C T21467C G26144T AAAAAAAAAAAAAAA29889- >MT188339 EPI_ISL_414590,2020-03-09,USA/MN3-MDH3/2020,United States / MN ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C1102T C8782T C17747T A17858G C18060T T21147C C21386T C22432T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837A- >MT188340 EPI_ISL_414589,2020-03-07,USA/MN2-MDH2/2020,United States / MN ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T514C C17410T AAAA29900- >MT188341 EPI_ISL_414588,2020-03-05,USA/MN1-MDH1/2020,United States / MN ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- A6035G C8782T A16467G C17747T A17858G C18060T -21385TTC C21386T C23185T T28144C CCATGTGATTTTAATAGCTTCTT29837- -T29867CCTCTC C29869A A29892G AA29896GG -29903A >MT192759 EPI_ISL_411915,2020-01-25,SARS-CoV-2/CGMH-CGU-01/human2020/TWN,China / Taiwan ATTAAAGGTTTATACCTTCCCAGGTAA1- AAAAAAAAAAAAAA29890- >MT192765 ,2020-03-11,SARS-CoV-2/PC00101P/human/2020/USA,United States / CA / San Diego County ATTAAAG1- C241T C3037T C14408T C18814T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT192772 EPI_ISL_418269,2020-01-22,SARS-CoV-2/nCoV-19-01S/human/2020/VNM,Vietnam / Ho Chi Minh city C10232T AAAAAAAAAAAA29892- >MT192773 EPI_ISL_418267,2020-01-22,SARS-CoV-2/nCoV-19-02S/human/2020/VNM,Vietnam / Ho Chi Minh city A26- C28T C10232T AAAAAAAAAAAA29892- >MT198651 EPI_ISL_414496,2020-03-04,SARS-CoV-2/Valencia002/human/2020/ESP,Spain / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T C24381T G25979T T28144C C28657T C28863T CTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29666- >MT198652 EPI_ISL_414598,2020-03-05,SARS-CoV-2/Valencia003/human/2020/ESP,Spain / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT198653 EPI_ISL_414495,2020-03-08,SARS-CoV-2/Valencia001/human/2020/ESP,Spain / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C14408T A20268G A23403G CTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29666- >MT215194 EPI_ISL_414519,2020-02-24,SARS-CoV-2/human/HKG.85_VM20002868/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1595A C9962T C11704T T13929C C14724T T21584G G26144T TAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29804- >MT215195 EPI_ISL_414517,2020-02-25,SARS-CoV-2/human/HKG/90_VM20002907/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1595A C9962T C11704T T13929C C14724T T21584G G26144T TAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29804- >MT226610 ,2020-01-20,SARS-CoV-2/KMS1/human/2020/CHN,China G4288T A4307C A7479G C8782T G11083T G11207C T11233G G12041C G12160C G12202C G12208T G12355C G12378A G12464T G12467T G12491T G12514C G12572T G12578T G12582T G12600A G12660C G12685C G12773T G12793T G20980C T21784A T28144C AAAA29900- >MT230904 EPI_ISL_434571,2020-01-22,SARS-CoV-2/human/HKG/HKU-001a/2020,China / Hong Kong C1663T C8782T G22661T C24034T T26729C G28077C T28144C AAAAAAAAAAAA29892- >MT233519 EPI_ISL_416484,2020-02-27,SARS-CoV-2/Valencia5/human/2020/ESP,Spain / Comunitat_Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT233520 EPI_ISL_416483,2020-02-26,SARS-CoV-2/Valencia4/human/2020/ESP,Spain / Comunitat_Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT233521 EPI_ISL_416485,2020-02-27,SARS-CoV-2/Valencia6/human/2020/ESP,Spain / Comunitat_Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T5290C C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT233522 EPI_ISL_416486,2020-03-02,SARS-CoV-2/Valencia7/human/2020/ESP,Spain / Comunitat_Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C3373A C14408T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT233523 EPI_ISL_416487,2020-03-04,SARS-CoV-2/Valencia8/human/2020/ESP,Spain / Comunitat_Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT233526 ,2020-01-19,2019-nCoV/USA-WA1/2020/P1,United States / WA ATTAAAGGTTTATACCTT1- C8782T C18060T T28144C ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT246449 EPI_ISL_417341,2020-03-13,hCoV-19/USA/WA-UW192/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT246450 EPI_ISL_417342,2020-03-13,hCoV-19/USA/WA-UW193/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT246451 EPI_ISL_417343,2020-03-13,hCoV-19/USA/WA-UW194/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T C14408T G16075T T18689A C20031A A23403G C27046T GGG28881AAC -29905AAA -29905A -29905AAA >MT246452 EPI_ISL_417344,2020-03-13,hCoV-19/USA/WA-UW195/2020,United States / Washington ATTAAAG1- C8782T C17747T A17858G C18060T A27525G T28144C AAAAAAAA29896- >MT246453 EPI_ISL_417345,2020-03-13,hCoV-19/USA/WA-UW196/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAA29898- >MT246454 EPI_ISL_417346,2020-03-12,hCoV-19/USA/WA-UW197/2020,United States / Washington ATTAAAGGT1- C1469T G11083T C14805T T17247C G26144T G29254T AA29902- >MT246455 EPI_ISL_417347,2020-03-12,hCoV-19/USA/WA-UW198/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- T47Y G332T C5784T C8782T C17747T A17858G C18060T C20823T T28144C A29903- >MT246456 EPI_ISL_417348,2020-03-13,hCoV-19/USA/WA-UW199/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGA1- C8092T C8782T C17747T A17858G C18060T C26037T G27877T T28144C G28881A G29862A A29866G A29869T >MT246457 EPI_ISL_417349,2020-03-12,hCoV-19/USA/WA-UW200/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C140T TAG4879- C8782T C12213T C17747T A17858G C18060T T28144C A29903- >MT246458 EPI_ISL_417350,2020-03-12,hCoV-19/USA/WA-UW201/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C10632T C17747T A17858G C18060T T28144C AAAAAAAAAAAA29892- >MT246459 EPI_ISL_417351,2020-03-12,SARS-CoV-2/WA-UW202/human/2020/USA,United States / Washington ATTAAAGG1------AC T10A C8782T G11161A C17474T C17747T A17858G C18060T G18149T T28144C A29865G A29869H -29905A -29905A -29905A -29905A -29905AAA >MT246460 EPI_ISL_417352,2020-03-12,hCoV-19/USA/WA-UW203/2020,United States / Washington TTA2GCT C241T C1059T C3037T C14408T A23403G G25563T -29905A -29905A -29905AAA -29905AAAAA >MT246461 EPI_ISL_417353,2020-03-13,SARS-CoV-2/WA-UW204/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C8782T C17747T A17858G C18060T C21575T G22988A T28144C -29904TA -29905ATA >MT246462 EPI_ISL_417354,2020-03-13,hCoV-19/USA/WA-UW205/2020,United States / Washington T2H G8768A C8782T C17747T A17858G C18060T A27525G T28144C >MT246463 EPI_ISL_417355,2020-03-13,hCoV-19/USA/WA-UW206/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C -29904AA -29905AA >MT246464 EPI_ISL_417356,2020-03-13,hCoV-19/USA/WA-UW207/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C8782T C17747T A17858G C18060T C27276T T27384C T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT246465 EPI_ISL_417357,2020-03-13,hCoV-19/USA/WA-UW208/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCA1- C8782T T15927G C17747T A17858G C18060T A25094G C26936T T28144C C29870A >MT246466 EPI_ISL_417358,2020-03-13,hCoV-19/USA/WA-UW209/2020,United States / Washington ATTAAA1- AACC34HTTH C8782T C17747T A17858G C18060T T28144C >MT246467 EPI_ISL_417359,2020-03-14,hCoV-19/USA/WA-UW210/2020,United States / Washington ATT1- AACC34TTTA C241T C1059T C3037T T9511C C14408T A23403G G25563T A29903- >MT246468 EPI_ISL_417360,2020-03-14,hCoV-19/USA/WA-UW211/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C8782T A14836G C17747T A17858G C18060T T28144C >MT246469 EPI_ISL_417361,2020-03-14,hCoV-19/USA/WA-UW212/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C8782T C13225T C17747T A17858G C18060T T28144C TG29867AA C29870A >MT246470 EPI_ISL_417362,2020-03-13,hCoV-19/USA/CT-UW213/2020,United States / Connecticut ATTAAAGGTTTATACCTT1- AACC34HTTH C241T C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAA29879- >MT246471 EPI_ISL_417363,2020-03-14,hCoV-19/USA/WA-UW214/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT G2632T C8782T G11083T C17747T A17858G C18060T T27384C T28144C >MT246472 EPI_ISL_417364,2020-03-12,hCoV-19/USA/WA-UW215/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCT1- C8782T T11320C C17747T A17858G C18060T G25494T T28144C AAAAAAAA29896- >MT246473 EPI_ISL_417365,2020-03-14,hCoV-19/USA/WA-UW216/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C140T TAG4879- C8782T C17747T A17858G C18060T C19018T T28144C A29869W A29903- >MT246474 EPI_ISL_417366,2020-03-14,hCoV-19/USA/WA-UW217/2020,United States / Washington ATTAAAGGTT1- AACC34HTTH G354A G5716T C8782T C17747T A17858G C18060T T28144C AAAAAAAAA29895- >MT246475 EPI_ISL_417367,2020-03-13,hCoV-19/USA/WA-UW218/2020,United States / Washington ATTAAAGGTTTATACCTTCC1- C8782T C9180T G11083T C16887T C17747T A17858G C18060T T28144C C29774T AAAAAA29898- >MT246476 EPI_ISL_417368,2020-03-13,hCoV-19/USA/UNKNOWN-UW219/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C5052T C8782T C17474T C17747T A17858G C18060T G27226T T28144C A29903- >MT246477 EPI_ISL_417369,2020-03-14,SARS-CoV-2/WA-UW220/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C6310T C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAA >MT246478 EPI_ISL_417370,2020-03-14,hCoV-19/USA/WA-UW221/2020,United States / Washington ATTAAAGGTTTAT1- C8782T C17747T A17858G C18060T G22984A T27384C T28144C A29903- >MT246479 EPI_ISL_417371,2020-03-13,hCoV-19/USA/WA-UW222/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- T221C C8782T C17747T A17858G C18060T T28144C G29862A A29903- >MT246480 EPI_ISL_417372,2020-03-13,hCoV-19/USA/CT-UW223/2020,United States / Connecticut A1- C241T C3037T C14408T C18877T A23403G G25563T -29904AA >MT246481 EPI_ISL_417373,2020-03-13,hCoV-19/USA/CT-UW224/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T -29904AA >MT246482 EPI_ISL_417374,2020-03-15,hCoV-19/USA/WA-UW225/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGA1- C8782T T15927G C17747T A17858G C18060T C19269T C26936T T27722C T28144C AA29902- >MT246483 EPI_ISL_417375,2020-03-15,SARS-CoV-2/WA-UW226/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T G22592T T28144C AAAAAAAAAAAA29892- >MT246484 EPI_ISL_417376,2020-03-15,hCoV-19/USA/WA-UW227/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C241T C1059T C3037T C10319T C14408T A23403G G25563T C27964T C29870M A29903- >MT246485 EPI_ISL_417377,2020-03-15,SARS-CoV-2/WA-UW228/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGT1- C8782T C11674T C17747T A17858G C18060T T28144C C28826T TG29867AA C29870A >MT246486 EPI_ISL_417378,2020-03-14,hCoV-19/USA/WA-UW229/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA C6310T C8782T C17747T A17858G C18060T G27327T T28144C AAAA29900- >MT246487 EPI_ISL_417379,2020-03-15,hCoV-19/USA/WA-UW230/2020,United States / Washington ATTAAAGGTTTATACC1- AACC34HTTH CG197TT TTT200CAG GTC204CGG G208T G210A C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAA29900- >MT246488 EPI_ISL_417380,2020-03-14,hCoV-19/USA/WA-UW231/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAA1- AACC34TTTA C8782T C17747T A17858G C18060T C21575T G22988A T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT246489 EPI_ISL_417381,2020-03-14,hCoV-19/USA/ID-UW232/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C8782T C17747T A17858G C18060T G22984A T27384C T28144C C29870A -29904AAAAAAAAAAA >MT246490 EPI_ISL_417382,2020-03-15,hCoV-19/USA/ID-UW233/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905AA >MT246667 ,2020-01-19,2019-nCoV/USA-WA1/2020/P2,United States / WA ATTA1- C8782T C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871G- >MT251972 EPI_ISL_417450,2020-03-14,hCoV-19/USA/ID-UW236/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C8782T C17747T A17858G C18060T T28144C T28229G AAAAA29899- >MT251973 EPI_ISL_417451,2020-03-14,hCoV-19/USA/WA-UW237/2020,United States / Washington ATTA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT251974 EPI_ISL_417452,2020-03-12,SARS-CoV-2/WA-UW238/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T C3037T C14408T C18877T A23403G G25563T G29864V TG29867AA >MT251975 EPI_ISL_417453,2020-03-14,hCoV-19/USA/ID-UW239/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAAC1- C3992T C8782T C17747T A17858G C18060T G22984A T27384C G27806A T28144C A29866G GA29868CT >MT251976 EPI_ISL_417454,2020-03-14,hCoV-19/USA/WA-UW240/2020,United States / Washington AT1- AACC34TTTA C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A AA29902- >MT251977 EPI_ISL_417448,2020-03-14,SARS-CoV-2/WA-UW234/human/2020/USA,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C832T C1545T C8782T C17747T A17858G C18060T T28144C >MT251978 EPI_ISL_417449,2020-03-14,hCoV-19/USA/ID-UW235/2020,United States / Idaho AT1- A4D C8782T G14229T C17747T A17858G C18060T T28144C -29905A -29905A >MT251979 EPI_ISL_417455,2020-03-14,hCoV-19/USA/ID-UW241/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAA29891- >MT251980 EPI_ISL_417456,2020-03-13,hCoV-19/USA/WA-UW242/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C140T G4642A TAG4879- C8782T C12213T C17747T A17858G C18060T C27807T T28144C G29862D AAAA29900- >MT252677 EPI_ISL_416433,2020-03-10,SARS-CoV-2/human/USA/WA-UW77/2020,United States / Washington ATTAAAGGTTTATACCTT1- AACC34HTTH C8782T C17747T A17858G C18060T T28144C -29905A -29905A -29905A -29905A -29905A >MT252678 EPI_ISL_416434,2020-03-10,SARS-CoV-2/human/USA/WA-UW78/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T T16419C A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT252679 EPI_ISL_416435,2020-03-10,SARS-CoV-2/human/USA/WA-UW79/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C1929T C5784T C8782T C17747T A17858G C18060T G26730A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252680 EPI_ISL_416436,2020-03-10,SARS-CoV-2/human/USA/WA-UW80/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- G2782T T5860C C8782T C17747T A17858G C18060T G26063T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252681 EPI_ISL_416437,2020-03-10,SARS-CoV-2/human/USA/WA-UW81/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- C4084T C8782T C17747T A17858G C18060T T28144C A29869G AAAAAAA29897- >MT252682 EPI_ISL_416438,2020-03-10,SARS-CoV-2/human/USA/WA-UW82/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAA29892- >MT252683 EPI_ISL_416440,2020-03-10,SARS-CoV-2/human/USA/WA-UW84/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- T150C T153G C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252684 EPI_ISL_416441,2020-03-10,SARS-CoV-2/human/USA/WA-UW85/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C8782T C17747T A17858G C18060T A18121G C27741T T28144C T29410C AAAAAAAA29896- >MT252685 EPI_ISL_416442,2020-03-10,SARS-CoV-2/human/USA/WA-UW86/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAAC1- C8782T C17747T A17858G C18060T T28144C AAAAAA29898- >MT252686 EPI_ISL_416443,2020-03-10,SARS-CoV-2/human/USA/WA-UW87/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAAT1- A6693G C8782T C17747T A17858G C18060T T28144C A29869H >MT252687 EPI_ISL_416444,2020-03-10,SARS-CoV-2/human/USA/WA-UW88/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G354A C4755T C8782T C17747T A17858G C18060T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT252688 EPI_ISL_416445,2020-03-10,SARS-CoV-2/human/USA/WA-UW89/2020,United States / Washington A55C C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252689 EPI_ISL_416446,2020-03-10,SARS-CoV-2/human/USA/WA-UW90/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCT1- ATG518- C8782T C17747T A17858G C18060T T28144C AAAAAA29898- >MT252690 EPI_ISL_416447,2020-03-10,SARS-CoV-2/human/USA/WA-UW91/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C8782T C17747T A17858G C18060T C21646T G22988A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252691 EPI_ISL_416448,2020-03-11,SARS-CoV-2/human/USA/WA-UW92/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T28144C AAAA29900- >MT252692 EPI_ISL_416449,2020-03-11,SARS-CoV-2/human/USA/WA-UW93/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAA1- C4320A C6312A G11083T C13730T C23929T C28311T AGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29797- >MT252693 EPI_ISL_416450,2020-03-11,SARS-CoV-2/human/USA/WA-UW94/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAAT1- C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT252694 EPI_ISL_416451,2020-03-10,SARS-CoV-2/human/USA/WA-UW95/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C8782T C17747T A17858G C18060T T28144C C29733T A29876C AAAAAAAA29896- >MT252695 EPI_ISL_416452,2020-03-10,SARS-CoV-2/human/USA/WA-UW96/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T C27005T G29553A AAAAAAAAAA29894- >MT252696 EPI_ISL_416729,2020-03-13,SARS-CoV-2/human/USA/WA-UW191/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT252697 EPI_ISL_416716,2020-03-13,SARS-CoV-2/human/USA/WA-UW178/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAAC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252698 EPI_ISL_416721,2020-03-13,SARS-CoV-2/human/USA/WA-UW183/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT252699 EPI_ISL_416705,2020-03-13,SARS-CoV-2/human/USA/WA-UW167/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252700 EPI_ISL_416706,2020-03-13,SARS-CoV-2/human/USA/WA-UW168/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C6312A G11083T C13730T C23929T C28311T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252701 EPI_ISL_416722,2020-03-12,SARS-CoV-2/human/USA/WA-UW184/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT252702 EPI_ISL_416726,2020-03-13,SARS-CoV-2/human/USA/WA-UW188/2020,United States / Washington AT1-A GG7AA A460G A7079G C8782T C17747T A17858G C18060T T28144C -29904GAV -29906AAAA >MT252703 EPI_ISL_416727,2020-03-13,SARS-CoV-2/human/USA/WA-UW189/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T T11320C C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252704 EPI_ISL_416728,2020-03-13,SARS-CoV-2/human/USA/WA-UW190/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTT1- C8782T C17747T A17858G C18060T T28144C A29700G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252705 EPI_ISL_416724,2020-03-13,SARS-CoV-2/human/USA/WA-UW186/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252706 EPI_ISL_416725,2020-03-13,SARS-CoV-2/human/USA/WA-UW187/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252707 EPI_ISL_416709,2020-03-13,SARS-CoV-2/human/USA/WA-UW171/2020,United States / Washington ATTAAAGGTTTATAC1- C8782T C17747T A17858G C18060T G21255C G25273C T28144C A29866C GA29868BT AAA29901- >MT252708 EPI_ISL_416710,2020-03-13,SARS-CoV-2/human/USA/WA-UW172/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C1238T C3593T C4683T T4779C C8782T C17747T A17858G C18060T A27200G T28144C T28924C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252709 EPI_ISL_416712,2020-03-14,SARS-CoV-2/human/USA/WA-UW174/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C8782T C17747T A17858G C18060T C23758T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252710 EPI_ISL_416714,2020-03-14,SARS-CoV-2/human/USA/WA-UW176/2020,United States / Washington ATTAAAGGTTTATACCTT1- C1238T C8782T C17747T A17858G C18060T T28144C T28924C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252711 EPI_ISL_416719,2020-03-14,SARS-CoV-2/human/USA/WA-UW181/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACA1- C1059T C3037T C14408T A23403G G25563T G29553A AGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29827- >MT252712 EPI_ISL_416707,2020-03-14,SARS-CoV-2/human/USA/WA-UW169/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252713 EPI_ISL_416717,2020-03-15,SARS-CoV-2/human/USA/WA-UW179/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C8782T C17747T A17858G C18060T T28144C AAAA29900- >MT252715 EPI_ISL_416708,2020-03-14,SARS-CoV-2/human/USA/WA-UW170/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AA29902- >MT252716 EPI_ISL_416718,2020-03-14,SARS-CoV-2/human/USA/WA-UW180/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAAC1- C8782T T14259C C17747T A17858G C18060T C23758T T28144C G29462T AA29902- >MT252717 EPI_ISL_416723,2020-03-14,SARS-CoV-2/human/USA/WA-UW185/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAAC1- A1515G C9223T G11083T C14805T T17247C G26144T CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT252719 EPI_ISL_416711,2020-03-15,SARS-CoV-2/human/USA/WA-UW173/2020,United States / Washington ATTAAAG1- T7582C C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252721 EPI_ISL_416701,2020-03-13,SARS-CoV-2/human/USA/WA-UW163/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCAC1- TT6963AC C6968A C8782T C17747T A17858G C18060T T28144C GGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29861- >MT252723 EPI_ISL_416700,2020-03-13,SARS-CoV-2/human/USA/WA-UW162/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C2469T C8782T C17747T A17858G C18060T C18877T T28144C TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT252725 EPI_ISL_416702,2020-03-13,SARS-CoV-2/human/USA/WA-UW164/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATC1- C8782T C17747T A17858G C18060T A19137G T28144C AAA29901- >MT252726 EPI_ISL_416693,2020-03-12,SARS-CoV-2/human/USA/WA-UW155/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G24348T G25563T G29553A GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT252728 EPI_ISL_416690,2020-03-13,SARS-CoV-2/human/USA/WA-UW152/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747T A17858G C18060T T28144C AAA29901- >MT252729 EPI_ISL_416691,2020-03-13,SARS-CoV-2/human/USA/WA-UW153/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C936T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252730 EPI_ISL_416695,2020-03-13,SARS-CoV-2/human/USA/WA-UW157/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C8782T C17747T A17858G C18060T A27525G T28144C AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT252733 EPI_ISL_416698,2020-03-13,SARS-CoV-2/human/USA/WA-UW160/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905A -29905A -29905AAA -29905A -29905G >MT252734 EPI_ISL_416692,2020-03-14,SARS-CoV-2/human/USA/WA-UW154/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTG1- C8782T C17747T A17858G C18060T T28144C A28910T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT252735 EPI_ISL_416687,2020-03-14,SARS-CoV-2/human/USA/WA-UW149/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C8782T C17747T A17858G C18060T T27056C T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252736 EPI_ISL_416689,2020-03-14,SARS-CoV-2/human/USA/WA-UW151/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34CTTT GTT669- C8782T G17158A C17747T A17858G C18060T T28144C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT252737 EPI_ISL_416684,2020-03-14,SARS-CoV-2/human/USA/WA-UW146/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCA1- C5281T C6310T C8782T C17747T A17858G C18060T G27327T T28144C C29445T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT252738 EPI_ISL_416683,2020-03-15,SARS-CoV-2/human/USA/WA-UW145/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AA34HT C37H G4148T C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252739 EPI_ISL_416685,2020-03-15,SARS-CoV-2/human/USA/WA-UW147/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252740 EPI_ISL_416688,2020-03-14,SARS-CoV-2/human/USA/WA-UW150/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252741 EPI_ISL_416661,2020-03-12,SARS-CoV-2/human/USA/WA-UW123/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1-----------------------AA AACC34TTTA C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAA29898- >MT252742 EPI_ISL_416662,2020-03-12,SARS-CoV-2/human/USA/WA-UW124/2020,United States / Washington ATTAAAG1- A34H C8782T C17747T A17858G C18060T T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT252745 EPI_ISL_416665,2020-03-12,SARS-CoV-2/human/USA/WA-UW127/2020,United States / Washington ATTAAAGGTTT1- C1238T C8782T C17747T A17858G C18060T T28144C T28924C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT252746 EPI_ISL_416666,2020-03-12,SARS-CoV-2/human/USA/WA-UW128/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C A29903- >MT252747 EPI_ISL_416667,2020-03-12,SARS-CoV-2/human/USA/WA-UW129/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T T15927G C17747T A17858G C18060T C18401T C26936T T28144C -29905ACA -29905A >MT252748 EPI_ISL_416668,2020-03-11,SARS-CoV-2/human/USA/WA-UW130/2020,United States / Washington ATTAAAG1- AACC34HTTH C8782T C17747T A17858G C18060T T27384C T28144C -29905AAAAAAAAAA >MT252749 EPI_ISL_416669,2020-03-11,SARS-CoV-2/human/USA/WA-UW131/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- A3635G C8782T C17747T A17858G C18060T T28144C TG29867AA C29870A A29903- >MT252756 EPI_ISL_416678,2020-03-11,SARS-CoV-2/human/USA/WA-UW140/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252757 EPI_ISL_416679,2020-03-11,SARS-CoV-2/human/USA/WA-UW141/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- CAAACCAACC28- C8782T C17059A C17747T A17858G C18060T T28144C T28229G A29903C >MT252758 EPI_ISL_416680,2020-03-11,SARS-CoV-2/human/USA/WA-UW142/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAAC1- C8782T C9565T C17747T A17858G C18060T T28144C G29688T G29692T G29862A AAAAAAA29897- >MT252761 EPI_ISL_416635,2020-03-12,SARS-CoV-2/human/USA/WA-UW97/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C8782T C17747T A17858G C18060T T27384C T28144C G29862A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT252763 EPI_ISL_416637,2020-03-12,SARS-CoV-2/human/USA/WA-UW99/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C8782T C17747T A17858G C18060T T28144C -29905A -29905A -29905AC >MT252764 EPI_ISL_416638,2020-03-12,SARS-CoV-2/human/USA/WA-UW100/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C8782T C17747T A17858G C18060T T28144C -29905AAATAT >MT252765 EPI_ISL_416639,2020-03-10,SARS-CoV-2/human/USA/WA-UW101/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C10228T T15927G C17747T A17858G C18060T C26936T T28144C AGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29827- >MT252766 EPI_ISL_416640,2020-03-11,SARS-CoV-2/human/USA/WA-UW102/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C6017A C8782T C17747T A17858G C18060T T27384C T28144C G29235A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT252767 EPI_ISL_416641,2020-03-11,SARS-CoV-2/human/USA/WA-UW103/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C A29871C AAA29901- >MT252768 EPI_ISL_416642,2020-03-11,SARS-CoV-2/human/USA/WA-UW104/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTT1- C241T C1059T C3037T C14408T G15760A A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252769 EPI_ISL_416643,2020-03-11,SARS-CoV-2/human/USA/WA-UW105/2020,United States / Washington ATTAAAGG1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT252770 EPI_ISL_416644,2020-03-11,SARS-CoV-2/human/USA/WA-UW106/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- G6220A C8782T C17747T A17858G C18060T T28144C G29862A AAA29901- >MT252771 EPI_ISL_416645,2020-03-11,SARS-CoV-2/human/USA/WA-UW107/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- A1136G G8602A C8782T C17747T A17858G C18060T T28144C CCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29801- >MT252772 EPI_ISL_416646,2020-03-11,SARS-CoV-2/human/USA/WA-UW108/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- A1515G C9223T G11083T C14805T T17247C G26144T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT252773 EPI_ISL_416647,2020-03-11,SARS-CoV-2/human/USA/WA-UW109/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT252774 EPI_ISL_416648,2020-03-11,SARS-CoV-2/human/USA/WA-UW110/2020,United States / Washington ATTAAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT252775 EPI_ISL_416649,2020-03-11,SARS-CoV-2/human/USA/WA-UW111/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T27384C T28144C A29903- >MT252778 EPI_ISL_416652,2020-03-11,SARS-CoV-2/human/USA/WA-UW114/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- G101A C6696T C8782T C17747T A17858G C18060T T28144C C29416T >MT252779 EPI_ISL_416653,2020-03-11,SARS-CoV-2/human/USA/WA-UW115/2020,United States / Washington ATTAAAGG1- A74C C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT252780 EPI_ISL_416654,2020-03-11,SARS-CoV-2/human/USA/WA-UW116/2020,United States / Washington ATTAAA1- -55C A6693G C8782T C17747T A17858G C18060T T28144C >MT252781 EPI_ISL_416655,2020-03-11,SARS-CoV-2/human/USA/WA-UW117/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T A23403G G25302T G25563T AAAA29900- >MT252782 EPI_ISL_416656,2020-03-11,SARS-CoV-2/human/USA/WA-UW118/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C8782T C17747T A17858G C18060T T28144C >MT252783 EPI_ISL_416657,2020-03-11,SARS-CoV-2/human/USA/WA-UW119/2020,United States / Washington AT1GA A4T ACC35TTH C8782T C17747T A17858G C18060T T28144C TTC29728GGG CC29732GA AG29735CT A29740T G29764T A29768C A29771C A29776T >MT252784 EPI_ISL_416658,2020-03-11,SARS-CoV-2/human/USA/WA-UW120/2020,United States / Washington A1- C241T C3037T C14408T A23403G -29905A -29905A -29905A -29905A >MT252785 EPI_ISL_416659,2020-03-11,SARS-CoV-2/human/USA/WA-UW121/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT252787 EPI_ISL_415592,2020-03-09,SARS-CoV-2/human/USA/WA-UW64/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATA1- C8782T T16242C C17747T A17858G C18060T T28144C G29628T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT252788 EPI_ISL_415596,2020-03-09,SARS-CoV-2/human/USA/WA-UW68/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T23010C T28144C TG29867AA >MT252792 EPI_ISL_415601,2020-03-10,SARS-CoV-2/human/USA/WA-UW73/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T T3011C C3037T C14408T A23403G >MT252793 EPI_ISL_415595,2020-03-09,SARS-CoV-2/human/USA/WA-UW67/2020,United States / Washington ATTAAAGGT1------AAC T11A C8782T C17747T A17858G C18060T T28144C C29870A A29903G >MT252794 EPI_ISL_415597,2020-03-10,SARS-CoV-2/human/USA/WA-UW69/2020,United States / Washington / Seattle ATTAAAGGTTTATACC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT252795 EPI_ISL_415602,2020-03-10,SARS-CoV-2/human/USA/WA-UW74/2020,United States / Washington / Seattle ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A39T C832T C8782T C17747T A17858G C18060T T28144C GAA29864TCT GA29868CT A29903- >MT252797 EPI_ISL_415603,2020-03-10,SARS-CoV-2/human/USA/WA-UW75/2020,United States / Washington / Seattle ATTAAAG1- AACC34HWYH C8782T C17747T A17858G C18060T A24877G T28144C -29905A -29905A -29905A -29905A >MT252798 EPI_ISL_415598,2020-03-10,SARS-CoV-2/human/USA/WA-UW70/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C8782T C17747T A17858G C18060T T28144C >MT252799 EPI_ISL_415599,2020-03-09,SARS-CoV-2/human/USA/WA-UW71/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTH C8782T C17747T A17858G C18060T T28144C A29903- >MT252800 EPI_ISL_415604,2020-03-10,SARS-CoV-2/human/USA/WA-UW76/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C8782T C17747T A17858G C18060T C23758T T28144C -29905A -29905AAA -29905A >MT252801 EPI_ISL_415605,2020-03-05,SARS-CoV-2/human/USA/WA-UW40/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGAT1- G261T C8782T C17747T A17858G C18060T T23010C T28144C TG29867AA C29870A -29904AAAAAAAAAAAAAAAA >MT252802 EPI_ISL_415606,2020-03-08,SARS-CoV-2/human/USA/WA-UW41/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- G261B C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAA29892- >MT252803 EPI_ISL_415607,2020-03-09,SARS-CoV-2/human/USA/WA-UW42/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATA1- T150C T153G A3635G C8782T T15849C C17747T A17858G C18060T T28144C AAAAAAA29897- >MT252804 EPI_ISL_415608,2020-03-08,SARS-CoV-2/human/USA/WA-UW43/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C6310T C8782T C17747T A17858G C18060T G27327T T28144C -29904AA -29905A -29905A -29905ADA >MT252805 EPI_ISL_415609,2020-03-08,SARS-CoV-2/human/USA/WA-UW44/2020,United States ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTA C6310T C8782T C17747T A17858G C18060T G27327T T28144C GA29868CT -29905A -29905A -29906AAT >MT252806 EPI_ISL_415611,2020-03-09,SARS-CoV-2/human/USA/WA-UW46/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T27384C T28144C -29905A -29905A -29905A -29905A -29905A >MT252807 EPI_ISL_415612,2020-03-09,SARS-CoV-2/human/USA/WA-UW47/2020,United States / Washington / Seattle ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HWTH C1419T C8782T G14126A C17747T A17858G C18060T T28144C -29905A -29905A -29905A -29905ADA >MT252808 EPI_ISL_415613,2020-03-09,SARS-CoV-2/human/USA/WA-UW48/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C -29905A -29905A -29905AAVC >MT252809 EPI_ISL_415614,2020-03-09,SARS-CoV-2/human/USA/WA-UW49/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGT1- C8782T C17747T A17858G C18060T T28144C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT252810 EPI_ISL_415615,2020-03-08,SARS-CoV-2/human/USA/WA-UW50/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- T2153A A3889G C8782T C17747T A17858G C18060T C27167T T28144C >MT252811 EPI_ISL_415616,2020-03-08,SARS-CoV-2/human/USA/WA-UW51/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATC1- C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT252821 EPI_ISL_416453,2020-03-07,SARS-CoV-2/human/USA/WA-UW36/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCA1- C832T C8782T C17747T A17858G C18060T T28144C G29861T G29868B >MT252822 EPI_ISL_416454,2020-03-06,SARS-CoV-2/human/USA/WA-UW37/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G C8782T C17747T A17858G C18060T T28144C C29870A A29903G >MT252823 EPI_ISL_416455,2020-03-07,SARS-CoV-2/human/USA/WA-UW38/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C8782T TG9704CT C17747T A17858G C18060T T28144C -29905AAA -29905A -29905A -29905DAA >MT252824 EPI_ISL_416456,2020-03-06,SARS-CoV-2/human/USA/WA-UW39/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C8782T C17747T A17858G C18060T T28144C GA29868CH A29903- >MT253696 EPI_ISL_418508,2020-01-23,SARS-CoV-2/HZ-162/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253697 EPI_ISL_418509,2020-01-23,SARS-CoV-2/HZ-178/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253698 EPI_ISL_418510,2020-01-23,SARS-CoV-2/HZ-185/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253699 EPI_ISL_418511,2020-01-24,SARS-CoV-2/HZ-477/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253700 EPI_ISL_418512,2020-01-25,SARS-CoV-2/HZ-481/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253701 EPI_ISL_418441,2020-01-21,SARS-CoV-2/HZ-48/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253702 EPI_ISL_418442,2020-01-21,SARS-CoV-2/HZ-49/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253703 EPI_ISL_418513,2020-01-25,SARS-CoV-2/HZ-551/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253704 EPI_ISL_418514,2020-01-25,SARS-CoV-2/HZ-576/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253705 EPI_ISL_418502,2020-01-22,SARS-CoV-2/HZ-60/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253706 EPI_ISL_418503,2020-01-22,SARS-CoV-2/HZ-62/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C16247Y CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253707 EPI_ISL_418515,2020-01-25,SARS-CoV-2/HZ-638/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253708 EPI_ISL_418504,2020-01-21,SARS-CoV-2/HZ-79/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253709 EPI_ISL_418506,2020-01-21,SARS-CoV-2/HZ-90/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT253710 EPI_ISL_418507,2020-01-21,SARS-CoV-2/HZ-91/human/2020/CHN,China / Zhejiang / Hangzhou ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT256917 EPI_ISL_417205,2020-03-02,hCoV-19/Spain/Valencia9/2020,Spain / Comunitat Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- A7068C G7071C A7079T T7084A T7087A A7089C T7092C C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT256918 EPI_ISL_417206,2020-03-06,hCoV-19/Spain/Valencia10/2020,Spain / Comunitat Valenciana / Valencia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C5621T C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT256924 ,2020-03-11,SARS-CoV-2/79256_Antioquia/human/2020/COL,Colombia / Antioquia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T C17470T C26088T T28144C G28985T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT258377 EPI_ISL_417931,2020-03-18,hCoV-19/USA/CZB-RR057-005/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- C8090T A8173R G11083T C14805T T17247C G26144T G29868R >MT258378 EPI_ISL_417932,2020-03-18,hCoV-19/USA/CZB-RR057-006/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT258379 EPI_ISL_417933,2020-03-18,hCoV-19/USA/CZB-RR057-007/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T C3037T G6680K T10129Y C14408T A23403G GGG28881AAC G29747A >MT258380 EPI_ISL_417935,2020-03-18,hCoV-19/USA/CZB-RR057-011/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C241T C1059T C3037T C14408T T15771Y A23403G G25563T >MT258381 EPI_ISL_417937,2020-03-18,hCoV-19/USA/CZB-RR057-013/2020,United States / California / San Francisco ATTA1- C241T C1059T C3037T T10129Y C11916T C14408T A23403R G25563T C29870M >MT258382 EPI_ISL_417938,2020-03-18,hCoV-19/USA/CZB-RR057-014/2020,United States / California / San Francisco ATTAAAGGTTTATACCTT1- C241T A375M T617Y C1059T T2145Y C3037T G4263R C6861Y T10129Y T10906Y T11470W C14408T T15357Y T22843W A23403G T25519Y G25563T T25704W T26524D C29167T T29360K C29364M G29868R C29870M >MT258383 EPI_ISL_417939,2020-03-18,hCoV-19/USA/CZB-RR057-015/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T C1059T T1529K C3037T C14408T T15771Y G18433A A23403G G25563T G29868R >MT259235 EPI_ISL_418028,2020-03-13,hCoV-19/USA/MN-UW243/2020,United States / Minnesota ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C241T C1059T C3037T A13748G C14408T A23403G G25563T C27964T AAAA29900- >MT259236 EPI_ISL_418029,2020-03-16,hCoV-19/USA/WA-UW244/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- AACC34TTTA C8782T C17747T A17858G C18060T T23010C T28144C -29904GA -29905A >MT259237 EPI_ISL_418030,2020-03-16,hCoV-19/USA/WA-UW245/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34HTTH C8782T C17747T A17858G C18060T T28144C G28280T T29515A AAAAAAA29897- >MT259238 EPI_ISL_418031,2020-03-16,hCoV-19/USA/WA-UW246/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCTTCTTCGTAAGAACGGTAATAAAGGAGCTGGTGGCCATAGTTACGGCGCCGATCTAAAGTCATTTGACTTAGGCGACGAGCTTGGCACTGATCCTTATGAAGATTTTCAAGAA1- C8782T C17747T A17858G C18060T T28144C A29866V GA29868AH >MT259239 EPI_ISL_418032,2020-03-16,hCoV-19/USA/WA-UW247/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAG1- C1059T C3037T C14408T A23403G G25563T G29553A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT259240 EPI_ISL_418033,2020-03-16,hCoV-19/USA/WA-UW248/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAA1- C1059T C3037T C14408T A23403G G25563T G29553A TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT259241 EPI_ISL_418034,2020-03-16,hCoV-19/USA/WA-UW249/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGAT1- C8782T C17747T A17858G C18060T T28144C >MT259242 EPI_ISL_418035,2020-03-14,hCoV-19/USA/WA-UW250/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCTTCTTCGTAAGAACG1- C2416T C3037T C14408T C23114T A23403G AATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29818- >MT259243 EPI_ISL_418036,2020-03-13,hCoV-19/USA/MN-UW251/2020,United States / Minnesota ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCA1- C241T C1059T C3037T C10319T C14408T A23403G G25563T C27964T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT259244 EPI_ISL_418037,2020-03-16,hCoV-19/USA/WA-UW252/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTH C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAA29900- >MT259245 EPI_ISL_418038,2020-03-15,hCoV-19/USA/WA-UW253/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAAT1- C8782T C17747T A17858G C18060T T28144C -29905A -29905AVA >MT259246 EPI_ISL_418039,2020-03-13,hCoV-19/USA/ID-UW254/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- T150C T153G C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT259247 EPI_ISL_418040,2020-03-16,hCoV-19/USA/WA-UW255/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- C8782T C17747T A17858G C18060T T19632A A23989G T28144C GA29868VT >MT259248 EPI_ISL_418041,2020-03-14,hCoV-19/USA/WA-UW256/2020,United States / Washington ATTAAAGGTTTATAC1- AACC34HTTT C241T AAGTCATTT686- C1059T C3037T C14408T A23403G G25563T A26433G >MT259249 EPI_ISL_418042,2020-03-13,hCoV-19/USA/ID-UW257/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAA1- C241T C1059T C1191T C3037T C14408T G21724C A23403G G25563T C27964T >MT259250 EPI_ISL_418043,2020-03-14,hCoV-19/USA/CT-UW258/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTA1- C241T C313T C3037T C14408T A23403G GGG28881AAC AAAAA29899- >MT259251 EPI_ISL_418044,2020-03-14,hCoV-19/USA/ID-UW259/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C241T C1059T C3037T C14408T A23403G G25563T C29870M -29904AAAAAAAAAAAAA >MT259252 EPI_ISL_418045,2020-03-14,hCoV-19/USA/ID-UW260/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T C27999T G28077C T28144C A29700G AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT259253 EPI_ISL_418046,2020-03-16,hCoV-19/USA/WA-UW261/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTG1- G3955T A8681G C8782T C17747T A17858G C18060T G22604A T28144C >MT259254 EPI_ISL_418047,2020-03-16,hCoV-19/USA/WA-UW262/2020,United States / Washington ATTAAAGGTTTATAC1- C8782T C17747T A17858G C18060T T28144C A29903- >MT259255 EPI_ISL_418048,2020-03-16,hCoV-19/USA/ID-UW263/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACA1- C8782T C17747T A17858G C18060T T28144C -29904DAAADA -29905AG >MT259256 EPI_ISL_418049,2020-03-13,hCoV-19/USA/ID-UW264/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T C27964T C28099T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT259257 EPI_ISL_418050,2020-03-16,hCoV-19/USA/WA-UW265/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T A14604G C17747T A17858G C18060T C21911T T28144C AAAA29900- >MT259258 EPI_ISL_418051,2020-03-13,hCoV-19/USA/WA-UW266/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C1059T C3037T C14408T A23403G G25563T C27964T C28099T T29867A -29904AAAAAAAAAAAAA >MT259259 EPI_ISL_418052,2020-03-16,hCoV-19/USA/ID-UW267/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTA1- C8782T C17747T A17858G C18060T T28144C AGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29799- >MT259260 EPI_ISL_418053,2020-03-16,hCoV-19/USA/WA-UW268/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTH C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT259261 EPI_ISL_418054,2020-03-16,hCoV-19/USA/WA-UW269/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34HTTH C241T C1059T C3037T G12111A C14408T A23403G G25563T G29553A CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT259262 EPI_ISL_418055,2020-03-14,hCoV-19/USA/ID-UW270/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTG1- C8782T C17747T A17858G C18060T C21646T G22988A T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT259263 EPI_ISL_418056,2020-03-13,hCoV-19/USA/CT-UW271/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C3037T C14408T A23403G GGG28881AAC -29904VAARAA >MT259264 EPI_ISL_418057,2020-03-13,hCoV-19/USA/ID-UW272/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT259265 EPI_ISL_418058,2020-03-13,hCoV-19/USA/CT-UW273/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTG1- C1059T C3037T C14408T A23403G G25563T AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT259266 EPI_ISL_418059,2020-03-13,hCoV-19/USA/WA-UW274/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT259267 EPI_ISL_418060,2020-03-14,hCoV-19/USA/WA-UW275/2020,United States ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTA T6691C C7843T G11083T A13768G C14805T A15869T T17247C C17639T G19542T G26144T C28915T AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT259268 EPI_ISL_418061,2020-03-13,hCoV-19/USA/ID-UW276/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C8782T C17747T A17858G C18060T T28144C A29869T -29905AAA >MT259269 EPI_ISL_418062,2020-03-14,hCoV-19/USA/WA-UW277/2020,United States / Washington ATTAAA1- AAC34TTT A6424C C8782T G11042T C17747T A17858G C18060T T22207C A24694T T28144C A28283G AAA29901- >MT259270 EPI_ISL_418063,2020-03-16,hCoV-19/USA/ID-UW278/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCT1- C8782T C17747T A17858G C18060T T27384C T28144C C28708T A29865H A29869T >MT259271 EPI_ISL_418064,2020-03-15,hCoV-19/USA/ID-UW279/2020,United States / Idaho ATTAAAGGTTTA1- AACC34CTTT C8782T T15888C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT259272 EPI_ISL_418065,2020-03-13,hCoV-19/USA/ID-UW280/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTG1- C8782T C17747T A17858G C18060T C18683T T28144C TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT259273 EPI_ISL_418067,2020-03-15,hCoV-19/USA/ID-UW282/2020,United States / Idaho ATTAAAGGTTTATACCT1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905A -29905ADA >MT259274 EPI_ISL_418069,2020-03-14,hCoV-19/USA/ID-UW284/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTG1- C8782T C17747T A17858G C18060T T28144C G28376A AAAAAAAA29896- >MT259275 EPI_ISL_418070,2020-03-14,hCoV-19/USA/WA-UW285/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AC35TT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT259276 EPI_ISL_418071,2020-03-15,hCoV-19/USA/WA-UW286/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C2061T C8782T C17747T A17858G C18060T T23010C T28144C -29905AA >MT259277 EPI_ISL_418072,2020-03-15,hCoV-19/USA/OR-UW287/2020,United States / Oregon ATTAAAGGTTTATACCTTC1- AACC34HTTH C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAA29901- >MT259278 EPI_ISL_418073,2020-03-15,hCoV-19/USA/ID-UW288/2020,United States / Idaho ATTAAA1- A35W C37H C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT259279 EPI_ISL_418074,2020-03-15,hCoV-19/USA/ID-UW289/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACA1- C8782T C17747T A17858G C18060T A27525G T28144C AGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29799- >MT259280 EPI_ISL_418075,2020-03-15,hCoV-19/USA/ID-UW290/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- C8782T C10818T C14937T C17747T A17858G C18060T T28144C AAAA29900- >MT259281 EPI_ISL_418076,2020-03-15,hCoV-19/USA/ID-UW291/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- A34W C241T C1059T C3037T C14408T A23403G G24368T G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT259282 EPI_ISL_418077,2020-03-15,hCoV-19/USA/OR-UW292/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C17747T A17858G C18060T G22988A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT259283 EPI_ISL_418078,2020-03-15,hCoV-19/USA/WA-UW293/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCT1- C8782T C17747T A17858G C18060T C18683T T28144C TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT259284 EPI_ISL_418079,2020-03-15,hCoV-19/USA/ID-UW294/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACA1- C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT259285 EPI_ISL_418080,2020-03-15,hCoV-19/USA/ID-UW295/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCT1- A4236G G11083T C14805T A19137T T25655C G26144T AAAAAAA29897- >MT259286 EPI_ISL_418081,2020-03-15,hCoV-19/USA/ID-UW296/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTA1- C241T C1059T C3037T G12111A C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAA29884- >MT259287 EPI_ISL_418082,2020-03-15,hCoV-19/USA/ID-UW297/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCG1- C8782T C10572T T11538C C17326T C17747T A17858G A17884G C18060T G19645T G23242T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT262896 EPI_ISL_418771,2020-03-13,hCoV-19/USA/WA-NH2/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262897 EPI_ISL_418772,2020-03-13,hCoV-19/USA/WA-NH3/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262898 EPI_ISL_418773,2020-03-13,hCoV-19/USA/WA-NH4/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262899 EPI_ISL_418774,2020-03-13,hCoV-19/USA/WA-NH5/2020,United States / Washington C8782T T13845C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262900 EPI_ISL_418775,2020-03-13,hCoV-19/USA/WA-NH6/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262901 EPI_ISL_418776,2020-03-13,hCoV-19/USA/WA-NH7/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262902 EPI_ISL_418777,2020-03-13,hCoV-19/USA/WA-NH8/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262903 EPI_ISL_418778,2020-03-13,hCoV-19/USA/WA-NH9/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262904 EPI_ISL_418779,2020-03-13,hCoV-19/USA/WA-NH10/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262905 EPI_ISL_418780,2020-03-13,hCoV-19/USA/WA-NH11/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262906 EPI_ISL_418781,2020-03-13,hCoV-19/USA/WA-NH12/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262907 EPI_ISL_418783,2020-03-13,hCoV-19/USA/WA-NH14/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262908 EPI_ISL_418784,2020-03-13,hCoV-19/USA/WA-NH17/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262909 EPI_ISL_418785,2020-03-13,hCoV-19/USA/WA-NH18/2020,United States / Washington C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262910 EPI_ISL_418786,2020-03-13,hCoV-19/USA/WA-NH19/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262911 EPI_ISL_418787,2020-03-13,hCoV-19/USA/WA-NH20/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262912 EPI_ISL_418788,2020-03-13,hCoV-19/USA/WA-NH21/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262913 EPI_ISL_418789,2020-03-13,hCoV-19/USA/WA-NH22/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262914 EPI_ISL_418791,2020-03-13,hCoV-19/USA/WA-NH24/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262915 EPI_ISL_418782,2020-03-13,hCoV-19/USA/WA-NH13/2020,United States / Washington C8782T C17747T A17858G C18060T G23120T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262916 EPI_ISL_418790,2020-03-13,hCoV-19/USA/WA-NH23/2020,United States / Washington C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT262993 EPI_ISL_419313,2020-03-12,SARS-Cov-2/Manga1/human/2020/PAK,Pakistan / KPK TTTCTATTGGTTCTT9721- TTGTATCTCGATGCTTATAAC19516- AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT263074 EPI_ISL_415787,2020-03-10,hCoV-19/Peru/010/2020,Peru / Lima ATTAAAGGT1- C241T C3037T A8945G C14408T A23403G T24022C GGG28881AAC ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT263381 EPI_ISL_418866,2020-03-13,hCoV-19/USA/WA-UW298/2020,United States / Washington ATTAAAG1- AACC34WTTM C8782T C17747T A17858G C18060T T28144C -29905AAA -29905A -29905AAA -29905ADA >MT263382 EPI_ISL_418867,2020-03-13,hCoV-19/USA/WA-UW299/2020,United States / Washington ATTAAAGGTTTAT1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C A29866T GA29868BT -29905AHATA -29905A -29905A >MT263383 EPI_ISL_418868,2020-03-13,hCoV-19/USA/WA-UW300/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- G219T C8782T C17747T A17858G C18060T T28144C TG29867AA >MT263384 EPI_ISL_418869,2020-03-16,hCoV-19/USA/WA-UW301/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCG1- T490A C3177T C8782T C9113T T18736C C21648T C24034T T26729C C27635T G28077C T28144C A29567C A29700G AAAAAAAAA29895- >MT263385 EPI_ISL_418870,2020-03-16,hCoV-19/USA/WA-UW302/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACG1- C2189Y C8782T C9866T C17747T A17858G C18060T G25337C T28144C >MT263386 EPI_ISL_418871,2020-03-14,SARS-CoV-2/WA-UW303/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C2676T C8782T A22606T T28144C G28878A G29742A CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT263387 EPI_ISL_418872,2020-03-16,SARS-CoV-2/WA-UW304/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C8782T C17747T A17858G C18060T G25337C T28144C A29869C -29905AAA -29905ATDCAT >MT263388 EPI_ISL_418873,2020-03-16,SARS-CoV-2/WA-UW305/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- C8782T A10323G T15927G C17747T A17858G C18060T C26936T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263389 EPI_ISL_418874,2020-03-16,hCoV-19/USA/WA-UW306/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGC1- G1696A ATTT2376GCWY A2386M C8782T AGG13512TTA G14335T A14433T T15927G C17747T A17858G C18060T G19312A G20167T C25941A A25943G T25949A T26354G C26936T T27164Y AA27168WR T28144C C29580T G29868V >MT263390 EPI_ISL_418875,2020-03-16,hCoV-19/USA/WA-UW307/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150Y C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905A -29905ADA >MT263391 EPI_ISL_418876,2020-03-16,SARS-CoV-2/WA-UW308/human/2020/USA,United States / WA ATTA1- T77W A79G C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904AAAAAA -29905A -29905A -29905A >MT263392 EPI_ISL_418878,2020-03-14,hCoV-19/USA/WA-UW310/2020,United States / Washington ATTAAAGGTTTATACCTTCC1- G23C CT84TC GG90-C C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263393 EPI_ISL_418879,2020-03-14,hCoV-19/USA/WA-UW312/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTG1- C1059T G1595A GTCT1599A- C3037T C14408T GTT22273RWW C22277V A23403G A24966T G25563T G29553A A29866V GA29868VT A29903- >MT263394 EPI_ISL_418880,2020-03-14,SARS-CoV-2/WA-UW313/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT263395 EPI_ISL_418881,2020-03-14,SARS-CoV-2/WA-UW314/human/2020/USA,United States / WA ATTAAA1- C8782T G11083T C17747T A17858G C18060T T28144C T29410C G29557T -29904AAAAAAA >MT263396 EPI_ISL_418882,2020-03-13,SARS-CoV-2/WA-UW315/human/2020/USA,United States / WA AT1TG A4H C8782T C17747T A17858G C18060T T28144C A29880C >MT263397 EPI_ISL_418883,2020-03-14,hCoV-19/USA/WA-UW316/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACA1- C1929T C5784T C8782T C17072T C17747T A17858G C18060T G26730A T28144C A29903- >MT263398 EPI_ISL_418884,2020-03-15,hCoV-19/USA/WA-UW317/2020,United States / Washington ATTAAAGGTTTATACCTT1- C6310T C8782T C17747T A17858G C18060T G27327T T28144C G28378T GA29868CT A29903- >MT263399 EPI_ISL_418886,2020-03-15,hCoV-19/USA/WA-UW319/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA G1401A C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAA >MT263400 EPI_ISL_418887,2020-03-14,hCoV-19/USA/WA-UW320/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- G8602A C8782T C17747T A17858G C18060T G26152A T28144C >MT263401 EPI_ISL_418888,2020-03-15,SARS-CoV-2/WA-UW321/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCT1- C8782T C17747T A17858G C18060T G26065T A26126C T28144C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT263402 EPI_ISL_418889,2020-03-16,hCoV-19/USA/WA-UW322/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT263403 EPI_ISL_418890,2020-03-16,SARS-CoV-2/WA-UW323/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C16329T C17747T A17858G C18060T T23010C T28144C -29905A -29905A -29905A >MT263404 EPI_ISL_418891,2020-03-24,SARS-CoV-2/WA-UW324/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- A4236G G11083T C14805T T25655C G26144T AAAAAA29898- >MT263405 EPI_ISL_418892,2020-03-16,SARS-CoV-2/WA-UW325/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C8078T C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAA29891- >MT263406 EPI_ISL_418893,2020-03-13,SARS-CoV-2/WA-UW326/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGG1- C241T C1059T C3037T C10319T C14408T C15720T A23403G G25563T C27964T GA29868CT -29904AAAAAAAA >MT263407 EPI_ISL_418894,2020-03-13,SARS-CoV-2/WA-UW327/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCT1- C1059T C3037T C14408T A23403G G25563T G29553A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT263408 EPI_ISL_418895,2020-03-14,hCoV-19/USA/CT-UW328/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C619T C1059T C3037T C14408T A14912G A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT263409 EPI_ISL_418896,2020-03-13,hCoV-19/USA/CT-UW329/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACT1- C3037T C14408T C18877T A23403G G25563T TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT263410 EPI_ISL_418897,2020-03-16,SARS-CoV-2/WA-UW330/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA T490A C3177T C6040T C8782T G12478A T18736C C21910T C24034T T26729C G28077C T28144C C28896G A29700G AA29902CC >MT263411 EPI_ISL_418898,2020-03-14,SARS-CoV-2/WA-UW331/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T C3037T C9534A C14408T C18877T A23403G G25563T GC28968CT -29904AAAAAAAAAAAAAA >MT263412 EPI_ISL_418899,2020-03-16,SARS-CoV-2/WA-UW332/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C2232T C8782T C17747T A17858G C18060T T23010C T28144C A29903- >MT263413 EPI_ISL_418900,2020-03-16,SARS-CoV-2/WA-UW333/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAA29894- >MT263414 EPI_ISL_418901,2020-03-13,hCoV-19/USA/MN-UW334/2020,United States / Minnesota ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C2110T C8782T C17747T A17858G C18060T C21575T T28144C >MT263415 EPI_ISL_418902,2020-03-13,SARS-CoV-2/WA-UW335/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C673T C1059T C3037T C4683T C14408T A23403G G25563T C27964T A29881C A29888C -29904AAAAAAAAAAA >MT263416 EPI_ISL_418903,2020-03-16,SARS-CoV-2/WA-UW336/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T G11083T C17747T A17858G C18060T G21850T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263417 EPI_ISL_418904,2020-03-16,hCoV-19/USA/WA-UW337/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C14408T A23403G G25563T C27804T G29553A AAAAAAA29897- >MT263418 EPI_ISL_418905,2020-03-16,SARS-CoV-2/WA-UW338/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAG1- ACC35TTH C8782T C17747T A17858G C18060T T23010C T28144C AAAA29900- >MT263419 EPI_ISL_418906,2020-03-16,SARS-CoV-2/WA-UW339/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G8602A C8782T C17747T A17858G C18060T T28144C C29870H A29903- >MT263420 EPI_ISL_418907,2020-03-16,hCoV-19/USA/WA-UW340/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T G25064C T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT263421 EPI_ISL_418908,2020-03-16,hCoV-19/USA/WA-UW341/2020,United States / Washington ATT1- A5T AACC34HTTH C1238T C3593T C4683T C8782T C17747T A17858G C18060T A27200G T28144C T28924C >MT263422 EPI_ISL_418909,2020-03-16,SARS-CoV-2/WA-UW342/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C5000T C8782T T15927G C17747T A17858G C18060T C26936T T28144C C29085T -29905A -29905A -29905AAA >MT263423 EPI_ISL_418910,2020-03-16,hCoV-19/USA/WA-UW343/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T28144C G29868V C29870H >MT263424 EPI_ISL_418911,2020-03-16,hCoV-19/USA/WA-UW344/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- AAGTCATTT686- C6310T C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAA29887- >MT263425 EPI_ISL_418912,2020-03-16,hCoV-19/USA/WA-UW345/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C8782T C17747T A17858G C18060T T28144C TG29867AA C29870A >MT263426 EPI_ISL_418913,2020-03-16,SARS-CoV-2/WA-UW346/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A G29862A G29864A TG29867AA C29870A >MT263427 EPI_ISL_418914,2020-03-16,SARS-CoV-2/WA-UW347/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCT1- C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAA >MT263428 EPI_ISL_418915,2020-03-13,SARS-CoV-2/WA-UW348/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- C241T C1059T C3037T C5183T C14408T A23403G G25563T G25691T A29903- >MT263429 EPI_ISL_418916,2020-03-13,SARS-CoV-2/WA-UW349/human/2020/USA,United States / WA ATTAAAGGTTTAT1- AACC34HTTA G1440A G2891A C28854T A29903- >MT263430 EPI_ISL_418917,2020-03-14,hCoV-19/USA/IL-UW350/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCT1- C8782T C17747T A17858G C18060T T28144C C28708T A29869T >MT263431 EPI_ISL_418918,2020-03-13,hCoV-19/USA/IL-UW351/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C11916T C14408T A23403G G25563T A29903- >MT263432 EPI_ISL_418919,2020-03-13,hCoV-19/USA/IL-UW352/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- A55C C241T C1059T C3037T C14408T A23403G G25563T -29905AAA -29905AAA -29905AA >MT263433 EPI_ISL_418920,2020-03-13,SARS-CoV-2/WA-UW353/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34HTT C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAA29885- >MT263434 EPI_ISL_418921,2020-03-16,hCoV-19/USA/UNKNOWN-UW354/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C1912T C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263435 EPI_ISL_418922,2020-03-16,hCoV-19/USA/WA-UW355/2020,United States / Washington ATTAAAGGTTTATACCTT1- AACC34TTTA A6693G C8782T C14877T C17747T A17858G C18060T T28144C A29188T AAA29901- >MT263436 EPI_ISL_418923,2020-03-16,hCoV-19/USA/WA-UW356/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT263437 EPI_ISL_418924,2020-03-14,SARS-CoV-2/WA-UW357/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT263438 EPI_ISL_418925,2020-03,SARS-CoV-2/WA-UW358/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C3037T C14408T A23403G C25452T >MT263439 EPI_ISL_418926,2020-03-14,hCoV-19/USA/WA-UW359/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTH C241T C1059T C3037T C12809T C14408T A23403G G25563T AAAAAAAA29896- >MT263440 EPI_ISL_418927,2020-03-16,hCoV-19/USA/WA-UW360/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- T2041C C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAA >MT263441 EPI_ISL_418928,2020-03-15,hCoV-19/USA/WA-UW361/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCT1- C2094T C8782T C17747T A17858G C18060T T19203C G22984A T27384C T28144C AAAAAA29898- >MT263442 EPI_ISL_418929,2020-03-17,hCoV-19/USA/WA-UW362/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAAT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A C29870M A29903- >MT263443 EPI_ISL_418930,2020-03-17,hCoV-19/USA/WA-UW363/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAA1- AACC34TTTA C8782T T15927G C17747T A17858G C18060T C18401T C24795T C26936T T28144C AAAAAAA29897- >MT263444 EPI_ISL_418931,2020-03-17,hCoV-19/USA/WA-UW364/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTA A55M C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAA29892- >MT263445 EPI_ISL_418932,2020-03-16,hCoV-19/USA/WA-UW365/2020,United States / Washington AT1- C37H C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT263446 EPI_ISL_418933,2020-03-17,hCoV-19/USA/WA-UW366/2020,United States / Washington ATTAAA1- A35T C37H C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAA29879- >MT263447 EPI_ISL_418934,2020-03-17,hCoV-19/USA/WA-UW367/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTA C8782T T15927G C17747T A17858G C18060T C26936T T27722C T28144C A29903- >MT263448 EPI_ISL_418935,2020-03-16,SARS-CoV-2/WA-UW368/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C16887T C17747T A17858G C18060T G25850A A27525G T28144C A29903- >MT263449 EPI_ISL_418936,2020-03-17,hCoV-19/USA/WA-UW369/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C8782T C17747T A17858G C18060T T28144C AA29902- >MT263450 EPI_ISL_418937,2020-03-17,hCoV-19/USA/WA-UW370/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C8782T C17747T A17858G C18060T G21893A C27276T T27384C T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT263451 EPI_ISL_418938,2020-03-16,SARS-CoV-2/WA-UW371/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C1238T C8782T C17747T A17858G C18060T G25494T T28144C T28924C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT263452 EPI_ISL_418939,2020-03-17,SARS-CoV-2/WA-UW372/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T T16299C C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263453 EPI_ISL_418940,2020-03-17,hCoV-19/USA/WA-UW373/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T C26028T T28144C A29866G GA29868CT >MT263454 EPI_ISL_418941,2020-03,SARS-CoV-2/WA-UW374/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1-----------------------------------TA C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT263455 EPI_ISL_418942,2020-03-17,hCoV-19/USA/WA-UW375/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT263456 EPI_ISL_418943,2020-03-17,hCoV-19/USA/WA-UW376/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C AA29902- >MT263457 EPI_ISL_418944,2020-03-15,SARS-CoV-2/WA-UW378/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C7518T C8782T C17747T A17858G C18060T T23119A A27525G T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT263458 EPI_ISL_418945,2020-03-15,SARS-CoV-2/WA-UW379/human/2020/USA,United States / WA ATTAAAGGTTTAT1- AACC34TTTH A6693G C8782T C14877T C17747T A17858G C18060T T28144C A29188T AAAAAAAAA29895- >MT263459 ,2020-03-24,SARS-CoV-2/WA-UW380/human/2020/USA,United States / WA AT1CA A4T C241T C1059T C3037T C14408T A23403G G25563T ACT27246CTC T27255G G27337D A27340C T27342G A27344G C27964T -29905A -29905AAAAAAA -29905GTC >MT263460 EPI_ISL_418946,2020-03-12,hCoV-19/USA/IL-UW381/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G C2110T C8782T C17747T A17858G C18060T C21575T T28144C >MT263461 EPI_ISL_418947,2020-03-16,hCoV-19/USA/UNKNOWN-UW382/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T27384C T28144C A29903- >MT263462 EPI_ISL_418948,2020-03-16,hCoV-19/USA/WA-UW383/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C8937T C17747T A17858G C18060T T28144C ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT263463 EPI_ISL_418949,2020-03-16,SARS-CoV-2/WA-UW384/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C8782T C11704T C17747T A17858G C18060T T20256C T28144C TG29867AA C29870A >MT263464 EPI_ISL_418950,2020-03-16,SARS-CoV-2/WA-UW385/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA G8602A C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT263465 EPI_ISL_418951,2020-03-16,SARS-CoV-2/WA-UW386/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- CC36TA C241T C1059T C3037T C14408T A23403G G25563T G29553A AA29902- >MT263466 EPI_ISL_418952,2020-03-16,SARS-CoV-2/WA-UW387/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTAT1- T540A G542A A544G G5953A T7026Y C8782T G9220A C17747T A17858G C18060T TGT21988- AG25336CC T28144C TAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29817- >MT263467 EPI_ISL_418953,2020-03-16,SARS-CoV-2/WA-UW388/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- TGT52GTC C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A >MT263468 EPI_ISL_418954,2020-03-17,SARS-CoV-2/WA-UW389/human/2020/USA,United States / WA ATTAAAG1- ACC35TYH C241T C1059T C3037T C14408T A23403G G25523T G25563T T27869C AAAA29900- >MT263469 EPI_ISL_418955,2020-03-15,SARS-CoV-2/WA-UW390/human/2020/USA,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C8782T C17747T A17858G C18060T G22984A T27384C T28144C TG29867AA C29870A -29904AAAAAAAAAAAAAAA >MT270101 EPI_ISL_450198,2020-01-28,SARS-CoV-2/human/DEU/BavPat1-ChVir929/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270102 EPI_ISL_450199,2020-01-29,SARS-CoV-2/human/DEU/BavPat4-ChVir1019/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACA1- C241T C3037T G6446A C9891Y A23403G AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT270103 EPI_ISL_450200 ,2020-01-28,SARS-CoV-2/human/DEU/BavPat3-ChVir1020/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACA1- C241T C3037T A23403G TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT270104 EPI_ISL_450201,2020-01,SARS-CoV-2/human/DEU/BavPat6-ChVir1247/2020,Germany / Bavaria ATTAAAGGTTTATA1- C241T C3037T G6446A A23403G TAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29859- >MT270105 EPI_ISL_450202,2020-01,SARS-CoV-2/human/DEU/BavPat5-ChVir1248/2020,Germany / Bavaria ATTAAAGGTT1- C241T C3037T G6446A A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT270106 EPI_ISL_450203,2020-02-01,SARS-CoV-2/human/DEU/BavPat7-ChVir1289/2020,Germany / Bavaria AT1- C241T C3037T G6446A A23403G TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT270107 EPI_ISL_450204,2020-02-03,SARS-CoV-2/human/DEU/BavPat8-ChVir1356/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G6446A A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270108 EPI_ISL_450205,2020-01,SARS-CoV-2/human/DEU/BavPat9-ChVir1433/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G6446A C22323T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270109 EPI_ISL_450206,2020-01,SARS-CoV-2/human/DEU/BavPat11-ChVir1459/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G6446A A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270110 EPI_ISL_450207,2020-02-07,SARS-CoV-2/human/DEU/BavPat10-ChVir1482/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G6446A A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270111 EPI_ISL_450208,2020-02-08,SARS-CoV-2/human/DEU/BavPat14-ChVir1483/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G6446A A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT270112 EPI_ISL_450209,2020-01-30,SARS-CoV-2/human/DEU/BavPat2-ChVir984-ChVir1017/2020,Germany / Bavaria ATTAAAGGTTTATAC1- C241T C3037T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT270113 EPI_ISL_450210,2020-02,SARS-CoV-2/human/DEU/BavPat16-ChVir1530/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTG1- C241T C3037T G6446A A23403G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT270114 EPI_ISL_450211,2020-02,SARS-CoV-2/human/DEU/BavPat15-ChVir1484-ChVir1536/2020,Germany / Bavaria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A5714G A9019R T15152Y C17410T A17635R T20020Y A23403G C25466T A28549R CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT270815 EPI_ISL_450404,2020-03-16,SARS-CoV-2/human/HKG/case163_VM20009579/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC TAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29804- >MT276323 EPI_ISL_419553,2020-02-28,hCoV-19/USA/RI_0520/2020,United States / Rhode Island C241T C3037T C3369T C6190T C14408T A20268G A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT276324 ,2020-02-26,SARS-CoV-2/CA_2602/human/2020/USA,United States / CA G14718T AAAAAAAAAAAAAAAAAAAAA29883- >MT276325 ,2020-02-27,SARS-CoV-2/WA_5030/human/2020/USA,United States / WA T2446C C3411T G5572T G11083T C14805T G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT276326 EPI_ISL_419556,2020-02-29,hCoV-19/USA/GA_2741/2020,United States / Georgia C241T C3037T C14408T G18898T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT276327 EPI_ISL_419557,2020-02-29,hCoV-19/USA/GA_2742/2020,United States / Georgia C241T C3037T C14408T G18898T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT276328 ,2020-02-27,SARS-CoV-2/OR_2656/human/2020/USA,United States / OR G11083T C14805T G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT276329 EPI_ISL_419559,2020-02-28,hCoV-19/USA/FL_5125/2020,United States / Florida C241T C313T C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT276331 EPI_ISL_419561,2020-02-29,hCoV-19/USA/TX_2020/2020,United States / Texas C3784Y C6636T G11083T C11750T C11956T AAAAAAAAAAAAAAAAAAAAA29883- >MT276597 ,2020-02,SARS-CoV-2/ISR_JP0320/human/2020/ISR,Israel ATTAAAGGTTTATACCTTCCCA1--------------------GG G11083T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871C- >MT276598 EPI_ISL_419210,2020-03-01,SARS-CoV-2/ISR_IT0320/human/2020/ISR,Israel / Ramat Gan -1GGGG C241T C313T C3037T C14408T A23403G GGG28881AAC TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT276600 EPI_ISL_450405,2020-03-08,SARS-CoV-2/human/HKG/case113_VM2003179/2020,China / Hong Kong ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1595A C9962T C11704T T13929C C14724T T21584G G26144T TAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29804- >MT281530 EPI_ISL_424349,2020-03-09,SARS-CoV-2/human/IRN/HGRC-01-IPI-8206/2020,Iran ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- G1397A G11083T C18377T G29374A G29742T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT292569 ,2020-03-09,SARS-CoV-2/human/ESP/Valencia13/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A20268G A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292570 ,2020-03-10,SARS-CoV-2/human/ESP/Valencia17/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A23403G C29144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292571 ,2020-03-09,SARS-CoV-2/human/ESP/Valencia12/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292572 ,2020-03-10,SARS-CoV-2/human/ESP/Valencia11/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G11083T T18834C G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292573 ,2020-03-09,SARS-CoV-2/human/ESP/Valencia14/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G24928T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292574 ,2020-03-02,SARS-CoV-2/human/ESP/Valencia15/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T C21691T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292575 ,2020-03-10,SARS-CoV-2/human/ESP/Valencia16/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A20268G A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292576 ,2020-03-10,SARS-CoV-2/human/ESP/Valencia18/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292577 ,2020-03-08,SARS-CoV-2/human/ESP/Valencia19/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C10156T C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292578 ,2020-03-09,SARS-CoV-2/human/ESP/Valencia20/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G242T C244T C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292579 ,2020-03-09,SARS-CoV-2/human/ESP/Valencia22/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292580 ,2020-02-27,SARS-CoV-2/human/ESP/Valencia25/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292581 ,2020-02-27,SARS-CoV-2/human/ESP/Valencia23/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT292582 ,2020-03-06,SARS-CoV-2/human/ESP/Valencia26/2020,Spain ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T T9477A C14805T G25979T T28144C C28657T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT293156 ,2020-03-30,SARS-CoV-2/human/USAWA-UW391/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH G578A C8782T C17747T A17858G C18060T A24694T C25207T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT293157 ,2020-03-29,SARS-CoV-2/human/USAWA-UW392/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAA1- C8782T C17747T A17858G C18060T T28144C A29900T A29903- >MT293158 ,2020-03-16,SARS-CoV-2/human/USAWA-UW393/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCG1- C8782T C17747T A17858G C18060T G21255C C26013T T28144C ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT293159 ,2020-03-16,SARS-CoV-2/human/USAWA-UW394/2020,United States / WA ATTAAAGGTTT1- AACC34TTTA C8782T A12787G C17747T A17858G C18060T A24694T T28144C G28899C AA29902- >MT293160 ,2020-03-16,SARS-CoV-2/human/USAWA-UW395/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34CTTT C8782T C15738T C17747T A17858G C18060T C21642T A27525G T28144C G28655T AAAAAAAA29896- >MT293161 ,2020-03-16,SARS-CoV-2/human/USAWA-UW396/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C6286T G11083T C14408T A23403G G25563T C28311T A29869T -29905AAA -29905A >MT293162 ,2020-03-16,SARS-CoV-2/human/USAWA-UW397/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGG1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT293163 ,2020-03-29,SARS-CoV-2/human/USAUNKNOWN-UW398/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- C5170T C8782T C16468T T17673C C17747T A17858G C18060T T28144C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT293164 ,2020-03-17,SARS-CoV-2/human/USAWA-UW399/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT293165 ,2020-03-17,SARS-CoV-2/human/USAWA-UW400/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT293166 ,2020-03-17,SARS-CoV-2/human/USAWA-UW401/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A6693G C8782T C17747T A17858G C18060T C25339T T28144C AAAAAAA29897- >MT293167 ,2020-03-17,SARS-CoV-2/human/USAWA-UW402/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCA1- T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT293168 ,2020-03-17,SARS-CoV-2/human/USAWA-UW403/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCG1- C8782T C17747T A17858G C18060T T28144C A29903- >MT293169 ,2020-03-17,SARS-CoV-2/human/USAWA-UW404/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT293170 ,2020-03-18,SARS-CoV-2/human/USAWA-UW405/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAG1- C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAA >MT293171 ,2020-03-17,SARS-CoV-2/human/USAWA-UW406/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAA29896- >MT293172 ,2020-03-17,SARS-CoV-2/human/USAWA-UW407/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34WTTA C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AA29902- >MT293173 ,2020-03-30,SARS-CoV-2/human/USAWA-UW408/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGT1- G91B C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905AAA >MT293174 ,2020-03-27,SARS-CoV-2/human/USAOR-UW409/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905A >MT293175 ,2020-03-30,SARS-CoV-2/human/USAWA-UW410/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTG1- C241T C1059T C3037T C11916T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT293176 ,2020-03-17,SARS-CoV-2/human/USACT-UW411/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904AAAAAAAAAAA >MT293177 ,2020-03-16,SARS-CoV-2/human/USACT-UW412/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C2061T A8170G C8782T C17747T A17858G C18060T T23010C T28144C -29905AAA -29905AAA -29905A >MT293178 ,2020-03-26,SARS-CoV-2/human/USAWA-UW413/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T T27895C C28289A T28340A G29553A AAAA29900- >MT293179 ,2020-03-17,SARS-CoV-2/human/USAWA-UW414/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T G22984A T27384C T28144C T29867H -29904AAAAAAAAAAAAA >MT293180 ,2020-03-17,SARS-CoV-2/human/USAWA-UW415/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGT1- C1059T C3037T C14408T A23403G G25563T G29553A TAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29817- >MT293181 ,2020-03-18,SARS-CoV-2/human/USAWA-UW416/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C8782T C17747T A17858G C18060T T28144C A29869T >MT293182 ,2020-03-18,SARS-CoV-2/human/USAWA-UW417/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA C241T C1059T C3037T C14408T G17808T A23403G G25563T C27964T AAAAA29899- >MT293183 ,2020-03-18,SARS-CoV-2/human/USAWA-UW418/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C4990T C8782T C17747T A17858G C18060T C19325T G25252A A27398G A27525G T28144C A29903- >MT293184 ,2020-03-18,SARS-CoV-2/human/USAWA-UW419/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C5784T C8782T C17747T A17858G C18060T G20580T G26730A T28144C C29253T AAAAAAAAA29895- >MT293185 ,2020-03-28,SARS-CoV-2/human/USACT-UW420/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C8782T C17747T A17858G C18060T T28144C AAAA29900- >MT293186 ,2020-03-17,SARS-CoV-2/human/USAWA-UW421/2020,United States / WA ATTAAAGGTTTATACCTTCCC1- C8782T A9634T C17747T A17858G C18060T CACAATTGG25416- T28144C AAAAAAAA29896- >MT293187 ,2020-03-17,SARS-CoV-2/human/USAWA-UW422/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AC35WT C8782T C17747T A17858G C18060T T28144C AA29902- >MT293188 ,2020-03-28,SARS-CoV-2/human/USACT-UW423/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTG1- T5098C C8782T C17747T A17858G C18060T G21255C T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT293189 ,2020-03-18,SARS-CoV-2/human/USAWA-UW424/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T G15760A A23403G G25563T AAAAAAAAA29895- >MT293190 ,2020-03-17,SARS-CoV-2/human/USAWA-UW425/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C4795T C5730T C8782T C17747T A17858G C18060T T27384C T28144C A29903- >MT293191 ,2020-03-17,SARS-CoV-2/human/USAWA-UW426/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT293192 ,2020-03-28,SARS-CoV-2/human/USACT-UW427/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTA C8782T C17747T A17858G C18060T T28144C C29733T A29903- >MT293193 ,2020-03-27,SARS-CoV-2/human/USACT-UW428/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGT1- C1059T C3037T C14408T A23403G G25563T G29553A TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT293194 ,2020-03-18,SARS-CoV-2/human/USAWA-UW429/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C8782T C17747T A17858G C18060T G22984A T27384C T28144C -29905A -29905AAA -29905AA >MT293195 ,2020-03-28,SARS-CoV-2/human/USACT-UW430/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T A29903- >MT293196 ,2020-03-19,SARS-CoV-2/human/USAWA-UW432/2020,United States / WA ATTAAAGGTT1- A35T C37H C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A AAAAA29899- >MT293197 ,2020-03-19,SARS-CoV-2/human/USAWA-UW433/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGC1- C241T C3037T C4809T C14408T C18877T A23403G G25563T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT293198 ,2020-03-19,SARS-CoV-2/human/USAWA-UW434/2020,United States / WA ATTAAAGG1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAA29890- >MT293199 ,2020-03-19,SARS-CoV-2/human/USAWA-UW435/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCT1- C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT293200 ,2020-03-19,SARS-CoV-2/human/USAWA-UW436/2020,United States / WA ATTAAAGGTTTATACCTTCCCAG1- AACC34TTTA G8602A C8782T C17747T A17858G C18060T G26152A T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT293201 ,2020-03-19,SARS-CoV-2/human/USAWA-UW437/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT293202 ,2020-03-19,SARS-CoV-2/human/USAWA-UW438/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C10623T C17747T A17858G C18060T T28144C -29904GA >MT293203 ,2020-03-18,SARS-CoV-2/human/USAWA-UW439/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACAC1- C8782T C17747T A17858G C18060T A18121G C27741T T28144C T29410C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT293204 ,2020-03-18,SARS-CoV-2/human/USAWA-UW441/2020,United States / WA ATTAAAG1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT293205 ,2020-03-19,SARS-CoV-2/human/USAWA-UW442/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A39T C241T C1059T C3037T C14408T G15760A C18171A A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT293206 ,2020-03-19,SARS-CoV-2/human/USAWA-UW443/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAG1- AA263TG A266T T327C A1815G C8782T A12199G AG13512TT C17747T A17858G C18060T G20580A C21721T C26456T C27498T T28144C -29904AAAAAAAAAAAAAAAAAAAAAAAAA >MT293207 ,2020-03-19,SARS-CoV-2/human/USAWA-UW444/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TWT C241T C3037T C14408T C23230T A23403G GGG28881AAC AAAAAA29898- >MT293208 ,2020-03-19,SARS-CoV-2/human/USAWA-UW445/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T23010C T28144C -29905A -29905A -29905A -29905A -29905A -29905A >MT293209 ,2020-03-19,SARS-CoV-2/human/USAWA-UW446/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C3037T C14408T C21742T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT293210 ,2020-03-19,SARS-CoV-2/human/USAWA-UW447/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C A29903- >MT293211 ,2020-03-19,SARS-CoV-2/human/USAWA-UW448/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1-----------------------------------TH C5784T C6723T C8782T C16716T C17747T A17858G C18060T C22281T G26730A T28144C AAAA29900- >MT293212 ,2020-03-19,SARS-CoV-2/human/USAWA-UW449/2020,United States / WA ATTAAAGGTTTATACC1- C19A A22T T25G C28T AACC34HTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAA29900- >MT293213 ,2020-03-19,SARS-CoV-2/human/USAWA-UW450/2020,United States / WA ATTAAAGGT1- A35H C241T C1059T C3037T G7560A C14408T G19999T G21452T A23403G G25563T AAAAAAA29897- >MT293214 ,2020-03-19,SARS-CoV-2/human/USAWA-UW451/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C1059T A2018G C3037T T3628C C14408T A23403G C25549T G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT293215 ,2020-03-19,SARS-CoV-2/human/USAWA-UW452/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGG1- AA34HT C37H C241T C1059T C3037T G7560A C14408T G19999T G21452T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT293216 ,2020-03-19,SARS-CoV-2/human/USAWA-UW453/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGG1- AAC34TTT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAA29884- >MT293217 ,2020-03-17,SARS-CoV-2/human/USAWA-UW455/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTGGTGAGACACTTGGTGTCCTTGTCCCTCATGTGGGCGAAATACCAGTGGCTTACCGCAAGGTTCT1- C1059T C3037T C14408T A23403G G25563T G29553A >MT293218 ,2020-03-18,SARS-CoV-2/human/USAWA-UW456/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- A6693G C8782T C17747T A17858G C18060T C25339T T28144C G29868C AA29902- >MT293219 ,2020-03-18,SARS-CoV-2/human/USAWA-UW457/2020,United States / WA ATTAAAGGTTTATACC1- C241T C3037T A7479G C14408T A20268G A23403G G29734C AA29902- >MT293220 ,2020-03-18,SARS-CoV-2/human/USAWA-UW460/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T T6394C C10319T C14408T A23403G G25563T C27964T AAA29901- >MT293221 ,2020-03-18,SARS-CoV-2/human/USAWA-UW461/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTG1- C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT293222 ,2020-03-18,SARS-CoV-2/human/USAWA-UW463/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C14408T A23403G C25096T G25563T G29868D A29903- >MT293223 ,2020-03-18,SARS-CoV-2/human/USAWA-UW464/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGA1- C1059T C3037T C14408T A23403G G25563T G29553A T29867H A29869T >MT293224 ,2020-03-18,SARS-CoV-2/human/USAWA-UW465/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGT1- A35T C37H C241T C1059T T2551C C3037T C14408T G16912T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT293225 ,2020-03-18,SARS-CoV-2/human/USAWA-UW466/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGG1- AACC34TTTH C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAA29890- >MT295464 EPI_ISL_434636,2020-03-10,SARS CoV-2/human/USA/UF-1/2020,United States ATTAAAGGTTT1- C8782T C17747T A17858G C18060T A24694T T28144C >MT295465 EPI_ISL_434637,2020-03-27,SARS-CoV-2/human/USA/UF-2/2020,United States ATTAAAGGTT1- T490A C3177T C8782T G11557A T18736C C21575T C24034T T26729C G28077C T28144C A29700G >MT300186 ,2020-04-02,SARS-CoV-2/human/USA/UNC_200173/2020,United States / North Carolina ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C14408T A23403G G25563T C26801T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT304474 EPI_ISL_420799,2020-02-27,hCoV-19/Korea/BA-ACH_2604/2020,South Korea G5572T G11083T C14805T G26144T C28311T AAAAAAAAAAAAAAAAAAAAA29883- >MT304475 EPI_ISL_420800,2020-02-29,hCoV-19/Korea/BA-ACH_2718/2020,South Korea G5572T G11083T C14805T G26144T C28311T AAAAAAAAAAAAAAAAAAAAA29883- >MT304476 EPI_ISL_420801,2020-02-29,hCoV-19/Korea/BA-ACH_2719/2020,South Korea G5572T G11083T C14805T G26144T C28311T AAAAAAAAAAAAAAAAAAAAA29883- >MT304477 EPI_ISL_420784,2020-03-02,hCov-19/USA/AZ_4811/2020,United States / Arizona C241T C3037T C14408T C16762Y T19839C A23403G G26918K GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT304478 EPI_ISL_420785,2020-03-02,hCov-19/USA/FL_6318/2020,United States / Florida C241T C313Y C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT304479 EPI_ISL_420787,2020-03-03,hCov-19/USA/GA_1299/2020,United States / Georgia C241T C3037T C14408T A23403G T25554G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT304480 EPI_ISL_420786,2020-03-03,hCov-19/USA/GA_1320/2020,United States / Georgia T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT304481 EPI_ISL_420788,2020-03-04,hCov-19/USA/GA_1445/2020,United States / Georgia T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT304482 EPI_ISL_420790,2020-03-01,hCov-19/USA/IL_1293/2020,United States / Illinois AAAAAAAAAAAAAAAAAAAAA29883- >MT304483 EPI_ISL_420789,2020-03-01,hCov-19/USA/IL_1375/2020,United States / Illinois C17249Y C28057Y AAAAAAAAAAAAAAAAAAAAA29883- >MT304484 EPI_ISL_420791,2020-02-29,hCov-19/USA/NH_0004/2020,United States / New Hampshire C241T C1059T C3037T T13006C C14408T A23403G G25563T C25688T AAAAAAAAAAAAAAAAAAAAA29883- >MT304485 EPI_ISL_420792,2020-03-02,hCov-19/USA/NH_0008/2020,United States / New Hampshire C241T C1059T C3037T T13006C C14408T A23403G G25563T C25688T AAAAAAAAAAAAAAAAAAAAA29883- >MT304486 EPI_ISL_420793,2020-03-02,hCov-19/USA/NY_2929/2020,United States / New York C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT304487 EPI_ISL_420794,2020-03-01,hCov-19/USA/OR_5430/2020,United States / Oregon G11083T C14805T G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT304488 EPI_ISL_420795,2020-03-01,hCov-19/USA/RI_0556/2020,United States / Rhode Island C241T C3037T C14408T A20268G A23403G C27684T AAAAAAAAAAAAAAAAAAAAA29883- >MT304489 EPI_ISL_420796,2020-02-29,hCov-19/USA/TX_2039/2020,United States / Texas C367Y G1785K C5208Y C9195Y C10747Y G10916K G11083T C12830Y C20703Y T22333Y C23492Y C29353T C29546T AAAAAAAAAAAAAAAAAAAAA29883- >MT304490 EPI_ISL_420797,2020-03-01,hCov-19/USA/TX_2817/2020,United States / Texas C241T G932A C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT304491 EPI_ISL_420798,2020-03-01,hCov-19/USA/TX_2967/2020,United States / Texas C241T C3037T C5663Y C7860Y T11654Y T12122Y C14408T C18877T A23403G G25563T C28315Y AAAAAAAAAAAAAAAAAAAAA29883- >MT308692 ,2020-03-09,SARS-CoV-2/human/USA/MI-SC2-0001/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT308693 ,2020-03-10,SARS-CoV-2/human/USA/MI-SC2-0002/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T C19170T A23403G T23596C GGG28881AAC CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT308694 ,2020-03-11,SARS-CoV-2/human/USA/MI-SC2-0003/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C1912T C8782T C17747T A17858G C18060T C18167T C24082T T28144C TGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29807- >MT308695 ,2020-03-10,SARS-CoV-2/human/USA/MI-SC2-0004/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G2914A C8782T C8937T C17470T G19816T A22356W C26088T T28144C ATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29815- >MT308696 ,2020-03-09,SARS-CoV-2/human/USA/MI-SC2-0005/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- A187G C241T C3037T C14408T C18796Y A23403G C25916T TAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29817- >MT308697 ,2020-03-11,SARS-CoV-2/human/USA/MI-SC2-0006/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T C20178Y A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT308698 ,2020-03-12,SARS-CoV-2/human/USA/MI-SC2-0007/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T T833C C1059T C3037T C14408T G20291A A23403G G25563T C27964T ATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29833- >MT308699 ,2020-03-12,SARS-CoV-2/human/USA/MI-SC2-0008/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T C18175Y A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT308700 ,2020-03-12,SARS-CoV-2/human/USA/MI-SC2-0009/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT308702 ,2020-04,SARS-CoV-2/human/USA/UNC_200191/2020,United States / NC ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C14408T A23403G G25563T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT308703 ,2020-04,SARS-CoV-2/human/USA/UNC_200181/2020,United States / NC ATTAAAGGTTTATACCTTCCCAGGT1- T490A C3177T C8782T C15960T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT308704 ,2020-04,SARS-CoV-2/human/USA/UNC_200189/2020,United States / NC ATTAAAGGTTTATACCTTCCCAGGT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT318827 ,2020-03-19,SARS-CoV-2/human/DEU/p995/2020,Germany G160A C241T C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT320538 ,2020-03,SARS-CoV-2/human/FRA/KRA-ROB/2020,France C241T A618G C3037T C14408T C15324T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT320891 ,2020-03-09,SARS-CoV-2/human/IRN/HGRC-1.1-IPI-8206/2020,Iran ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- G1397A G11083T C18377T G29374A G29742T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT322394 EPI_ISL_418864,2020-03-17,hCoV-19/USA/VA-DCLS-0001/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747T A17858G C18060T A24694T T28144C C29870A >MT322395 EPI_ISL_418956,2020-03-17,hCoV-19/USA/VA-DCLS-0002/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C3589T C8782T C17747T A17858G C18060T T28144C >MT322396 ,2020-03,SARS-CoV-2/human/USA/VA-DCLS-0003/2020,United States / VA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C3589T C8782T C13138T C17747T A17858G C18060T T28144C C29870A >MT322397 ,2020-03,SARS-CoV-2/human/USA/VA-DCLS-0004/2020,United States / VA ATTAAAGGTT1- C3589T C8782T C17747T A17858G C18060T T28144C >MT322398 EPI_ISL_419256,2020-03-16,hCoV-19/USA/VA-DCLS-0005/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T G29868A C29870A >MT322399 EPI_ISL_419257,2020-03-19,hCoV-19/USA/VA-DCLS-0006/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C14925T C16887T A23403G G25563T C29870A >MT322400 EPI_ISL_419258,2020-03-19,hCoV-19/USA/VA-DCLS-0007/2020,United States / Virginia ATTAAAGGTTTATACC1- C241T C1059T C3037T C14408T C14925T A23403G G25563T >MT322401 EPI_ISL_419260,2020-03-08,hCoV-19/USA/VA-DCLS-0008/2020,United States / Virginia ATT1- C241T C3037T C14408T C18877T A23403G G25563T >MT322402 EPI_ISL_419261,2020-03-09,hCoV-19/USA/VA-DCLS-0009/2020,United States / Virginia ATTAA1- C241T C3037T C14408T C18877T A23403G G25563T C29870A >MT322403 EPI_ISL_419262,2020-03-09,hCoV-19/USA/VA-DCLS-0010/2020,United States / Virginia ATTAAAGGTTT1- C8782T C17747T A17858G C18060T G18756T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT322404 EPI_ISL_419263,2020-03-10,hCoV-19/USA/VA-DCLS-0011/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747T A17858G C18060T T28144C C29870A >MT322405 EPI_ISL_419706,2020-03-10,hCoV-19/USA/VA-DCLS-0012/2020,United States / Virginia AT1-C C241T C2416T C3037T C14408T A23403G G25563T C29870A >MT322406 EPI_ISL_419710,2020-03-12,hCoV-19/USA/VA-DCLS-0016/2020,United States / Virginia ATTAAAGGTTTATACCT1- C241T C2416T C3037T C10626T C10712T C14408T C22444T A23403G G25563T >MT322407 EPI_ISL_419711,2020-03-11,hCoV-19/USA/VA-DCLS-0017/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C8782T C17747T A17858G C18060T T28144C G29868A C29870A >MT322408 EPI_ISL_420028,2020-03-11,hCoV-19/USA/VA-DCLS-0018/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C8782T C17747T A17858G C18060T T28144C C29870A >MT322409 EPI_ISL_420029,2020-03-11,hCoV-19/USA/VA-DCLS-0019/2020,United States / Virginia ATT1- C8782T C17747T A17858G C18060T T28144C C29870A >MT322410 EPI_ISL_419712,2020-03-10,hCoV-19/USA/VA-DCLS-0020/2020,United States / Virginia ATTAAAGGTTTA1- C241T C2416T C3037T C14408T A23403G G25563T C29870A >MT322411 EPI_ISL_419713,2020-03-11,hCoV-19/USA/VA-DCLS-0021/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A361G C8782T G22468T T25559G T28144C G28878A G29742A >MT322412 EPI_ISL_420628,2020-03-13,hCoV-19/USA/VA-DCLS-0024/2020,United States/Virginia AT1- C8626T C8782T C17747T A17858G C18060T T28144C GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT322413 EPI_ISL_420018,2020-03-16,hCoV-19/USA/VA-DCLS-0031/2020,United States / Virginia ATTAAA1- C241T C1059T C3037T C14408T A23403G G25563T >MT322414 EPI_ISL_420019,2020-03-19,hCoV-19/USA/VA-DCLS-0033/2020,United States / Virginia AT1- C241T C1059T C3037T C14408T C14925T A23403G G25563T T27553C T27645C >MT322415 EPI_ISL_420629,2020-03-20,hCoV-19/USA/VA-DCLS-0034/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C14925T A23403G G25563T C29870A >MT322416 EPI_ISL_420020,2020-03-20,hCoV-19/USA/VA-DCLS-0036/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C14408T C14925T A23403G G25563T C29870M >MT322417 EPI_ISL_420630,2020-03-23,hCoV-19/USA/VA-DCLS-0038/2020,United States / Virginia AT1- C241T C1059T C3037T C14408T C14925T A23403G G25563T >MT322418 EPI_ISL_420021,2020-03-22,hCoV-19/USA/VA-DCLS-0039/2020,United States / Virginia ATTAAAG1- C241T C1059T C3037T C14408T C14925T A23403G G25563T C29870A >MT322419 EPI_ISL_420022,2020-03-22,hCoV-19/USA/VA-DCLS-0040/2020,United States / Virginia ATTA1- C241T C1059T C3037T C14408T C14925T A23403G G25563T A27421G C29870A >MT322420 EPI_ISL_420023,2020-03-25,hCoV-19/USA/VA-DCLS-0042/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G C28720T GGG28881AAC G29868R C29870A >MT322421 EPI_ISL_420024,2020-03-27,hCoV-19/USA/VA-DCLS-0043/2020,United States / Virginia AT1- C241T C3037T C14408T G16858T G17278T C22120T A23403G C23575T G23587C GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT322422 EPI_ISL_420025,2020-03-27,hCoV-19/USA/VA-DCLS-0044/2020,United States / Virginia ATTAAA1- C241T C3037T C14408T G16858T G17278T C22120T A23403G C23575T G23587C >MT322423 EPI_ISL_420026,2020-03-27,hCoV-19/USA/VA-DCLS-0045/2020,United States / Virginia ATT1- C241T C3037T C14408T G16858T G17278T C22120T A23403G C23575T G23587C C29870A >MT322424 EPI_ISL_420027,2020-03-28,hCoV-19/USA/VA-DCLS-0046/2020,United States / Virginia C241T C1059T C1917T C3037T C14408T A23403G G25563T A29869W >MT324062 EPI_ISL_417186,2020-03-07,SARS-CoV-2/human/ZAF/R03006/2020,South Africa / KwaZulu-Natal C241T C3037T C13620T C14408T C21595T A23403G >MT324684 EPI_ISL_434677,2020-03-25,SARS-CoV-2/ENV/USA/UF-3/2020,United States T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAA29890- >MT325561 ,2020-03-09,SARS-CoV-2/human/USA/AZ_8132/2020,United States / AZ C8782T A16628G C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325562 ,2020-03-09,SARS-CoV-2/human/USA/AZ_8135/2020,United States / AZ C8782T C17747T A17858G C18060T G18197R T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325563 ,2020-03-06,SARS-CoV-2/human/USA/DC_0004/2020,United States / DC C8782T C16667Y C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325564 ,2020-03-06,SARS-CoV-2/human/USA/FL_1177/2020,United States / FL C241T C3037T C5467T C8389T C14408T A23403G T25245Y G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325565 ,2020-03-02,SARS-CoV-2/human/USA/FL_7169/2020,United States / FL C241T C3037T C8389T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325566 ,2020-03-05,SARS-CoV-2/human/USA/FL_9590/2020,United States / FL G11083T C14805T A15779C T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT325567 ,2020-03-05,SARS-CoV-2/human/USA/FL_9655/2020,United States / FL T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635Y G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325568 ,2020-03-06,SARS-CoV-2/human/USA/FL_9656/2020,United States / FL C8782T A16467G C17747T A17858G C18060T C23185T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325569 ,2020-03-04,SARS-CoV-2/human/USA/GA_1621/2020,United States / GA C241T C3037T C14408T T19839C T22016W A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAA29883- >MT325570 ,2020-03-05,SARS-CoV-2/human/USA/GA_1847/2020,United States / GA T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325571 ,2020-03,SARS-CoV-2/human/USA/GA_2055/2020,United States / GA T490A C3177T C8782T C11824T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325572 ,2020-03-08,SARS-CoV-2/human/USA/GA_2118/2020,United States / GA T490A C3177T C8782T G14118A T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325573 ,2020-03,SARS-CoV-2/human/USA/GA_2120/2020,United States / GA T490A C3177T C8782T T18736C C24034T T26729C C27635Y T27698G G28077C C28093Y T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325574 ,2020-03,SARS-CoV-2/human/USA/GA_2185/2020,United States / GA C8782T C16466Y C17747T A17858G C18060T GG18505RK T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325575 ,2020-03-10,SARS-CoV-2/human/USA/GA_2343/2020,United States / GA T490A C3177T C8782T T18736C C21588T C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325576 ,2020-03-08,SARS-CoV-2/human/USA/IA_6394/2020,United States / IA C241T T3011C C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325577 ,2020-03-07,SARS-CoV-2/human/USA/IL_0087/2020,United States / IL C241T C3037T C10507T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325578 ,2020-03-07,SARS-CoV-2/human/USA/IL_0089/2020,United States / IL C8782T G16396T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325579 ,2020-03-09,SARS-CoV-2/human/USA/IN_2001/2020,United States / IN C241T C3037T C14408T GG18505RK A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325580 ,2020-03-06,SARS-CoV-2/human/USA/KS_4126/2020,United States / KS C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325581 ,2020-03-09,SARS-CoV-2/human/USA/LA_0842/2020,United States / LA C241T C1059T C3037T C10319T A14012T C14408T C17894T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAA29883- >MT325582 ,2020-03-05,SARS-CoV-2/human/USA/MA_0020/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325583 ,2020-03-06,SARS-CoV-2/human/USA/MA_3672/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325584 ,2020-03-06,SARS-CoV-2/human/USA/MA_3699/2020,United States / MA C241T C2416T C3037T C3261M C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325585 ,2020-03-06,SARS-CoV-2/human/USA/MA_3878/2020,United States / MA C241T C2416T C3037T C14408T C17747Y A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325586 ,2020-03-07,SARS-CoV-2/human/USA/MA_4811/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAA29883- >MT325587 ,2020-03-04,SARS-CoV-2/human/USA/MD_0026/2020,United States / MD C241T C3037T C14408T G15672T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325588 ,2020-03-06,SARS-CoV-2/human/USA/MO_4470/2020,United States / MO C241T C313T C3037T C13384T C14408T A23403G GGG28881AAC C29353T AAAAAAAAAAAAAAAAAAAAA29883- >MT325589 ,2020-03-08,SARS-CoV-2/human/USA/NC_0024/2020,United States / NC C241T C2416T C3037T C14408T G14707K A23403G G25563T G26233T G28812K AAAAAAAAAAAAAAAAAAAAA29883- >MT325590 ,2020-03-07,SARS-CoV-2/human/USA/NC_0031/2020,United States / NC C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325591 ,2020-03-06,SARS-CoV-2/human/USA/NC_6999/2020,United States / NC C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325592 ,2020-03-05,SARS-CoV-2/human/USA/NE_6605/2020,United States / NE G1440A G2891A C12651T AAAAAAAAAAAAAAAAAAAAA29883- >MT325593 ,2020-03-07,SARS-CoV-2/human/USA/NE_7025/2020,United States / NE G1440A G2891A C12651T AAAAAAAAAAAAAAAAAAAAA29883- >MT325594 ,2020-03-06,SARS-CoV-2/human/USA/NH_0029/2020,United States / NH C241T C3037T C5007T C14408T C14554T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325595 ,2020-03-06,SARS-CoV-2/human/USA/NH_0033/2020,United States / NH C241T C1059T C3037T T13006C C14408T A23403G G25563T C25688T AAAAAAAAAAAAAAAAAAAAA29883- >MT325596 ,2020-03-04,SARS-CoV-2/human/USA/NJ_3592/2020,United States / NJ C241T C1059T C3037T C14408T GG18505RK T22270Y TT22274WK A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325597 ,2020-03-09,SARS-CoV-2/human/USA/NV_0052/2020,United States / NV A2480G C2558T A4912C G11083T C14805T C17010A C21575T G26144T A27151R AAAAAAAAAAAAAAAAAAAAA29883- >MT325598 ,2020-03-08,SARS-CoV-2/human/USA/OH_0023/2020,United States / OH C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325599 ,2020-03-05,SARS-CoV-2/human/USA/PA_1802/2020,United States / PA C241T C3037T C14408T A20268G A23403G G29734C AAAAAAAAAAAAAAAAAAAAA29883- >MT325600 ,2020-03-05,SARS-CoV-2/human/USA/PA_1881/2020,United States / PA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325601 ,2020-03-07,SARS-CoV-2/human/USA/PA_2317/2020,United States / PA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325602 ,2020-03-08,SARS-CoV-2/human/USA/PA_2937/2020,United States / PA C241T C2416T C3037T C14408T T15393Y A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325603 ,2020-03-09,SARS-CoV-2/human/USA/PA_4395/2020,United States / PA C241T C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325604 ,2020-03-06,SARS-CoV-2/human/USA/PA_4405/2020,United States / PA C241T C3037T C14408T GG18505RK C18877T G19847A A23403G G25563T A28480T AAAAAAAAAAAAAAAAAAAAA29883- >MT325605 ,2020-03-05,SARS-CoV-2/human/USA/RI_0702/2020,United States / RI C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325606 ,2020-03-06,SARS-CoV-2/human/USA/SC_3569/2020,United States / SC T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325607 ,2020-03-07,SARS-CoV-2/human/USA/SC_3575/2020,United States / SC T490A C3177T C8782T C16466T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325608 ,2020-03-08,SARS-CoV-2/human/USA/SC_6370/2020,United States / SC T490A C3177T C6525Y C8782T C8956T C17074Y T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325609 ,2020-03-05,SARS-CoV-2/human/USA/UT_8199/2020,United States / UT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325610 ,2020-03-07,SARS-CoV-2/human/USA/UT_8906/2020,United States / UT C241T C379A C1059T C3037T C14408T GG18505RK A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325611 ,2020-03-08,SARS-CoV-2/human/USA/VA_6352/2020,United States / VA C241T C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325612 ,2020-03-08,SARS-CoV-2/human/USA/VA_6377/2020,United States / VA C241T C3037T C14408T GG18505RK C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325613 ,2020-03-08,SARS-CoV-2/human/USA/VA_6382/2020,United States / VA C8782T C17747T A17858G C18060T G18756K T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT325614 ,2020-03-08,SARS-CoV-2/human/USA/VA_6389/2020,United States / VA C241T C3037T G11417T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325615 ,2020-03-07,SARS-CoV-2/human/USA/IA_6391/2020,United States / IA C241T C3037T C14408T G22335T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325616 ,2020-03-06,SARS-CoV-2/human/USA/MA_3623/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325617 ,2020-03-08,SARS-CoV-2/human/USA/IA_6396/2020,United States / IA C241T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325618 ,2020-03-08,SARS-CoV-2/human/USA/IA_6395/2020,United States / IA C241T T3011C C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325619 ,2020-03-08,SARS-CoV-2/human/USA/IA_6401/2020,United States / IA C241T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325620 ,2020-03-08,SARS-CoV-2/human/USA/IA_6399/2020,United States / IA C241T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325621 ,2020-03-07,SARS-CoV-2/human/USA/IA_6390/2020,United States / IA C241T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT325622 ,2020-03-04,SARS-CoV-2/human/USA/NJ_3201/2020,United States / NJ C241T C3037T C14408T C18877T G19847A A23403G G25563T A28480T AAAAAAAAAAAAAAAAAAAAA29883- >MT325623 ,2020-03-05,SARS-CoV-2/human/USA/SC_3520/2020,United States / SC T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325624 ,2020-03-07,SARS-CoV-2/human/USA/SC_3570/2020,United States / SC T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325625 ,2020-03-07,SARS-CoV-2/human/USA/SC_3571/2020,United States / SC T490A C3177T C8782T T11635C T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT325626 ,2020-03-05,SARS-CoV-2/human/USA/SC_3572/2020,United States / SC C241T C3037T G4255T C14408T A23403G A26530G AAAAAAAAAAAAAAAAAAAAA29883- >MT325627 ,2020-03-04,SARS-CoV-2/human/USA/NY_1922/2020,United States / NY C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325628 ,2020-03-06,SARS-CoV-2/human/USA/VA_6171/2020,United States / VA A361G C8782T G22468T T25559G T28144C G28878A G29742A AAAAAAAAAAAAAAAAAAAAA29883- >MT325629 ,2020-03-05,SARS-CoV-2/human/USA/MA_8932/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAA29883- >MT325630 ,2020-03-05,SARS-CoV-2/human/USA/MA_8933/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325631 ,2020-03-05,SARS-CoV-2/human/USA/MA_9703/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325632 ,2020-03-04,SARS-CoV-2/human/USA/MA_9704/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325633 ,2020-03-04,SARS-CoV-2/human/USA/MA_9889/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325634 ,2020-03-05,SARS-CoV-2/human/USA/MA_1355/2020,United States / MA C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT325635 ,2020-03-06,SARS-CoV-2/human/USA/MA_2652/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T G26109T AAAAAAAAAAAAAAAAAAAAA29883- >MT325636 ,2020-03-06,SARS-CoV-2/human/USA/MA_3614/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAA29883- >MT325637 ,2020-03-06,SARS-CoV-2/human/USA/MA_3616/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325638 ,2020-03-06,SARS-CoV-2/human/USA/MA_3626/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT325639 ,2020-03-07,SARS-CoV-2/human/USA/MA_3642/2020,United States / MA C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAA29883- >MT325640 ,2020-03-06,SARS-CoV-2/human/USA/MA_3653/2020,United States / MA C241T C2416T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT326023 EPI_ISL_424333,2020-03-24,hCoV-19/USA/WA-UW-2006/2020,United States / Washington ATTAAAGGTTTATA1- AACC34TTTA C241T C1059T C3037T C7164T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT326024 EPI_ISL_424334,2020-03-24,hCoV-19/USA/WA-UW-1994/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCT1- C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT326025 EPI_ISL_424335,2020-03-24,hCoV-19/USA/WA-UW-1998/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C1059T C3037T C14408T C16750T A23403G G25563T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT326026 EPI_ISL_424336,2020-03-24,hCoV-19/USA/WA-UW-1988/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGC1- C8782T C17747T A17858G C18060T T28144C G28326T C28887T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT326027 EPI_ISL_424337,2020-03-24,hCoV-19/USA/WA-UW-1977/2020,United States / Washington ATTAAA1- AACC34TTTH C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT326028 EPI_ISL_424338,2020-03-24,hCoV-19/USA/WA-UW-1986/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G1820A C8782T C17747T A17858G C18060T T28144C C28887T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326029 EPI_ISL_424339,2020-03-24,hCoV-19/USA/WA-UW-2016/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C18176T A23403G G25563T GA29868VT A29903- >MT326030 EPI_ISL_424340,2020-03-24,hCoV-19/USA/WA-UW-2009/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT326031 EPI_ISL_424341,2020-03-24,hCoV-19/USA/WA-UW-2008/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTA1- C241T C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C T29194C A29869T -29904A >MT326032 EPI_ISL_424277,2020-03-23,hCoV-19/USA/WA-UW-1858/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C1059T CA2788YR C3037T A13693T TA14222GC C14225T C14408T G18407C A23403G G29553A A29869T A29903G >MT326033 EPI_ISL_424278,2020-03-23,hCoV-19/USA/WA-UW-1866/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGA1- C1059T C3037T C14408T A23403G G25563T C27964T TGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29829- >MT326034 EPI_ISL_424279,2020-03-23,hCoV-19/USA/WA-UW-1850/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAA1- T1896C C8782T C11674T C17747T A17858G C18060T T28144C C28826T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT326035 EPI_ISL_424280,2020-03-23,hCoV-19/USA/WA-UW-1868/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- A1079C G1397A C4456T T7225C C9319T G11083T C19862T T27384C T28688C G29742T A29869T A29903- >MT326036 EPI_ISL_424281,2020-03-23,hCoV-19/USA/WA-UW-1864/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTC1- C241T C3037T C14408T C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT326037 EPI_ISL_424282,2020-03-23,hCoV-19/USA/WA-UW-1835/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTG1- C8782T C17747T A17858G C18060T T23010C G25471T T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT326038 EPI_ISL_424283,2020-03-24,hCoV-19/USA/WA-UW-1946/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGG1- C8782T T15927G C17747T A17858G C18060T C18401T C26936T T28144C C29144T AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT326039 EPI_ISL_424284,2020-03-23,hCoV-19/USA/WA-UW-1863/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACG1- C8782T G13571T C17747T A17858G C18060T A27924G T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326040 EPI_ISL_424285,2020-03-21,hCoV-19/USA/OR-UW-1851/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C17747T A17858G C18060T T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT326041 EPI_ISL_424286,2020-03-20,hCoV-19/USA/OR-UW-1849/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTG1- C8782T C15240T C17747T A17858G C18060T G18984T C21774T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326042 EPI_ISL_424287,2020-03-23,hCoV-19/USA/WA-UW-1843/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- G8602A C8782T C17747T A17858G C18060T C25418A G26152A T28144C AA29902- >MT326043 EPI_ISL_424288,2020-03-22,hCoV-19/USA/WA-UW-1846/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGA1- C8782T C17747T A17858G C18060T T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT326044 EPI_ISL_424289,2020-03-23,hCoV-19/USA/WA-UW-1860/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTG1- C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT326045 EPI_ISL_424290,2020-03-23,hCoV-19/USA/WA-UW-1853/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACA1- C1059T C3037T C6040T C14408T A23403G G25563T A29869T >MT326046 EPI_ISL_424291,2020-03-23,hCoV-19/USA/WA-UW-1854/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C241T C1059T C3037T C6040T C14408T A23403G G25563T A29869T >MT326047 EPI_ISL_424292,2020-03-23,hCoV-19/USA/WA-UW-1855/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGAT1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAA29895- >MT326048 EPI_ISL_424293,2020-03-23,hCoV-19/USA/WA-UW-1870/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C6040T C14408T A23403G G25563T A29903- >MT326049 EPI_ISL_424294,2020-03-23,hCoV-19/USA/WA-UW-1872/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C64T C241T C379A C1059T T2244C C3037T C11704T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326050 EPI_ISL_424295,2020-03-23,hCoV-19/USA/WA-UW-1905/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCT1- C8782T G11083T C17747T C17766T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT326051 EPI_ISL_424296,2020-03-23,hCoV-19/USA/WA-UW-1919/2020,United States / Washington ATTAAAGGTTTATACCTTCCCA1- AACC34TTTH G8602A C8782T C17747T A17858G C18060T G21800T C25418A G26152A T28144C C29838T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT326052 EPI_ISL_424297,2020-03-23,hCoV-19/USA/WA-UW-1913/2020,United States / Washington ATTAAAGGTT1- T13B ACC35TTH C8782T C10002T A10844G C17747T A17858G C18060T T28144C A29903- >MT326053 EPI_ISL_424298,2020-03-23,hCoV-19/USA/WA-UW-1920/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAA1- C2592T C8782T C17274T C17326T C17747T A17858G A17884G C18060T G19645T G19800A T28144C A29903- >MT326054 EPI_ISL_424299,2020-03-23,hCoV-19/USA/WA-UW-1904/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C241T C1059T C3037T G3947T C6040T C14184T C14408T A23403G G25563T C25844T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT326055 EPI_ISL_424300,2020-03-21,hCoV-19/USA/WA-UW-1879/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C6040T C14408T A23403G G25563T -29904GA -29905A -29905A >MT326056 EPI_ISL_424302,2020-03-24,hCoV-19/USA/WA-UW-1878/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAA29897- >MT326057 EPI_ISL_424303,2020-03-21,hCoV-19/USA/OR-UW-1937/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGT1- C8782T C17747T A17858G C18060T C21575T G22988A T28144C CTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29803- >MT326058 EPI_ISL_424304,2020-03-24,hCoV-19/USA/WA-UW-1930/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTT C241T C1059T G1736A C3037T C14408T C16260T A23403G G25563T C28821A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326059 EPI_ISL_424305,2020-03-24,hCoV-19/USA/WA-UW-1877/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCC1- C241T C1059T C3037T C14408T A23403G TTG25532- G25563T G29553A CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT326060 EPI_ISL_424306,2020-03-23,hCoV-19/USA/WA-UW-1874/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGC1- C1059T C3037T C14408T C18176T A23403G G25563T >MT326061 EPI_ISL_424307,2020-03-23,hCoV-19/USA/OR-UW-1885/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTA1- AACC34HTTH C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAA29896- >MT326062 EPI_ISL_424308,2020-03-22,hCoV-19/USA/OR-UW-1887/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCT1- T8473C C8782T C17747T A17858G C18060T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT326063 EPI_ISL_424309,2020-03-24,hCoV-19/USA/WA-UW-1881/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A >MT326064 EPI_ISL_424310,2020-03-23,hCoV-19/USA/WA-UW-1888/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGT1- C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT326065 EPI_ISL_424311,2020-03-24,hCoV-19/USA/WA-UW-1880/2020,United States / Washington ATTAAA1- AAC34TTT C241T C1059T C3037T C14408T G19962C A23403G G25563T T28144C C29311T AAAAA29899- >MT326066 EPI_ISL_424312,2020-03-24,hCoV-19/USA/WA-UW-1955/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T G29553A AA29902- >MT326067 EPI_ISL_424313,2020-03-24,hCoV-19/USA/WA-UW-1956/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T G29553A AA29902- >MT326068 EPI_ISL_424314,2020-03-24,hCoV-19/USA/WA-UW-1921/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T C27630T G29553A AAAAAAAA29896- >MT326069 EPI_ISL_424316,2020-03-24,hCoV-19/USA/WA-UW-1890/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A -29904GA -29905A -29905A -29905A -29905A >MT326070 EPI_ISL_424317,2020-03-24,hCoV-19/USA/WA-UW-1928/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT326071 EPI_ISL_424318,2020-03-22,hCoV-19/USA/ID-UW-1938/2020,United States / Idaho ATTAAAGGTTTATAC1- AACC34HTTH C241T T833C C1059T C3037T GATATGGTT11267- C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326072 EPI_ISL_424319,2020-03-22,hCoV-19/USA/ID-UW-1935/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACG1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT326073 EPI_ISL_424320,2020-03-21,hCoV-19/USA/ID-UW-1939/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGA1- T833C C1059T C1377T C3037T C14408T A23403G G25563T C27964T ATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29792- >MT326074 EPI_ISL_424321,2020-03-20,hCoV-19/USA/ID-UW-1925/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326075 EPI_ISL_424322,2020-03-20,hCoV-19/USA/ID-UW-1934/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT326076 EPI_ISL_424323,2020-03-24,hCoV-19/USA/WA-UW-1944/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C T29758C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326077 EPI_ISL_424324,2020-03-24,hCoV-19/USA/WA-UW-1965/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTG1- C1059T C3037T C14408T G18079T A23403G G25563T G29553A -29905A -29905A -29905A -29905AA >MT326078 EPI_ISL_424325,2020-03-24,hCoV-19/USA/WA-UW-1954/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C6040T C12242T C14408T A23403G G25563T CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT326079 EPI_ISL_424326,2020-03-20,hCoV-19/USA/WA-UW-1968/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G1401A C8782T C17747T A17858G C18060T T28144C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT326080 EPI_ISL_424328,2020-03-24,hCoV-19/USA/WA-UW-1963/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTG1- C1191T C3037T G9224A C14408T A23403G AGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29799- >MT326081 EPI_ISL_424329,2020-03-24,hCoV-19/USA/WA-UW-1984/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1----------------------------------TTA C8782T C17747T A17858G C18060T T28144C C28887T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326082 EPI_ISL_424330,2020-03-23,hCoV-19/USA/WA-UW-1865/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C6255T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326083 EPI_ISL_424331,2020-03-22,hCoV-19/USA/WA-UW-1907/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGT1- C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT326084 EPI_ISL_424332,2020-03-22,hCoV-19/USA/WA-UW-1917/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C3373A C9733T C12778T C14408T C20457T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT326085 EPI_ISL_424249,2020-03-20,hCoV-19/USA/UNKNOWN-UW-1791/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCA1- C8782T C17747T A17858G C18060T T28144C C28887T -29905AAAAAAAAAAAAA >MT326086 EPI_ISL_424250,2020-03-19,hCoV-19/USA/WA-UW-1785/2020,United States / Washington ATTAAAGGTTTATA1- AACC34HTTH A6821G C8092T C8782T C17747T A17858G C18060T C26037T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326087 EPI_ISL_424251,2020-03-23,hCoV-19/USA/WA-UW-1801/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAA29879- >MT326088 EPI_ISL_424252,2020-03-23,hCoV-19/USA/WA-UW-1840/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C8782T C10818T C14937T C17747T A17858G C18060T T28144C >MT326089 EPI_ISL_424253,2020-03-21,hCoV-19/USA/WA-UW-1792/2020,United States / Washington ATTAAAGGTTTATACCTTC1- AACC34TTTH C241T C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326090 EPI_ISL_424254,2020-03-21,hCoV-19/USA/WA-UW-1796/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATG1- C241T C3037T C14408T G15414A G17964A A23403G G23405T C23575T >MT326091 EPI_ISL_424255,2020-03-16,hCoV-19/USA/UNKNOWN-UW-1832/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTG1- A2952G AG2956TT A4236G G11083T C14805T T25655C G26144T A29903- >MT326092 EPI_ISL_424256,2020-03-22,hCoV-19/USA/WA-UW-1774/2020,United States / Washington ATTAAAGGTTT1- C241T C1059T C1473T C3037T C14408T A23403G G23426A G25563T G29553A AA29902- >MT326093 EPI_ISL_424257,2020-03-22,hCoV-19/USA/WA-UW-1775/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- A34W C241T C3037T C14408T G16075T T18689A C20031A A23403G C27046T GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326094 EPI_ISL_424258,2020-03-22,hCoV-19/USA/WA-UW-1778/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C8782T C17747T A17858G C18060T C25614T T28144C AAAAAA29898- >MT326095 EPI_ISL_424259,2020-03-22,hCoV-19/USA/WA-UW-1797/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905A -29905ATA -29905A >MT326096 EPI_ISL_424260,2020-03-22,hCoV-19/USA/WA-UW-1779/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAAC1- AACC34TTTA C241T C1059T C3037T C10319T C14408T A20755C A23403G G25563T G25677T -29904G >MT326097 EPI_ISL_424261,2020-03-21,hCoV-19/USA/WA-UW-1784/2020,United States / Washington ATTAAAGG1- AACC34TTTA C8782T C17747T A17858G C18060T G22984A T27384C T28144C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT326098 EPI_ISL_424262,2020-03-22,hCoV-19/USA/WA-UW-1782/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1-----------------------------------TA C8782T C17747T A17858G C18060T G21770T T27384C T28144C A29903- >MT326099 EPI_ISL_424263,2020-03-22,hCoV-19/USA/WA-UW-1799/2020,United States / Washington ATTAAAGGT1- C241T C379A C1059T T2244C C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT326100 EPI_ISL_424264,2020-03-22,hCoV-19/USA/WA-UW-1805/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- C8782T G17427T C17747T A17858G C18060T T28144C AAAAA29899- >MT326101 EPI_ISL_424265,2020-03-22,hCoV-19/USA/UNKNOWN-UW-1834/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G C8782T C12786T C17747T A17858G C18060T T28144C C28887T A29903- >MT326102 EPI_ISL_424266,2020-03-22,hCoV-19/USA/UNKNOWN-UW-1818/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCG1- C8782T C17747T A17858G C18060T T28144C C28887T AAAAA29899- >MT326103 EPI_ISL_424267,2020-03-22,hCoV-19/USA/UNKNOWN-UW-1817/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA C8782T C17747T A17858G C18060T T28144C C28887T AAA29901- >MT326104 EPI_ISL_424268,2020-03-22,hCoV-19/USA/UNKNOWN-UW-1816/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C8782T C17747T A17858G C18060T T28144C C28887T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326105 EPI_ISL_424269,2020-03-22,hCoV-19/USA/WA-UW-1828/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- AACC34TTTH C1457T A6693G C8266T C8782T C14877T C17747T A17858G C18060T C20148T T28144C A29188T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT326106 EPI_ISL_424270,2020-03-22,hCoV-19/USA/WA-UW-1831/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C12880T C14408T C15480T A23403G G25563T G29553A -29905AAAAAAAAAGAA >MT326107 EPI_ISL_424271,2020-03-22,hCoV-19/USA/WA-UW-1827/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAG1- C1059T C3037T C10851T C14408T G22180A A23403G G25563T >MT326108 EPI_ISL_424272,2020-03-22,hCoV-19/USA/WA-UW-1825/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACAC1- C8782T C17747T A17858G C18060T T28144C G29868C A29903- >MT326109 EPI_ISL_424273,2020-03-22,hCoV-19/USA/WA-UW-1826/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAG1- AG264TA C3037T C14408T T15354C C18877T A23403G G25563T TAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29817- >MT326110 EPI_ISL_424275,2020-03-22,hCoV-19/USA/WA-UW-1821/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTA1- G2588A C2594A A2596C G2599T A2952G G4255A C8782T C10818T A13693T C14937T C17747T A17858G C18060T T28144C A29869T A29903- >MT326111 EPI_ISL_424276,2020-03-22,hCoV-19/USA/WA-UW-1822/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- G3231T C8782T C17747T A17858G C18060T T28144C >MT326112 EPI_ISL_424186,2020-03-20,hCoV-19/USA/WA-UW-1644/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGT1- G91C C241T C1059T C3037T G4975T C14408T C20823T A23403G G25523T G25563T T27869C AA29902- >MT326113 EPI_ISL_424187,2020-03-20,hCoV-19/USA/WA-UW-1646/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C6040T C14408T A23403G G25563T AAAAAAAAAAAAAA29890- >MT326114 EPI_ISL_424188,2020-03-20,hCoV-19/USA/WA-UW-1645/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAG1- A2480G C2558T G11083T C14805T C20389T G26144T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT326115 EPI_ISL_424190,2020-03-20,hCoV-19/USA/WA-UW-1675/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGT1- C3037T C14408T A23403G G25563T G29553A AGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29827- >MT326116 EPI_ISL_424191,2020-03-20,hCoV-19/USA/WA-UW-1683/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C36T C8782T T11320C C17747T A17858G C18060T T28144C AAAA29900- >MT326117 EPI_ISL_424192,2020-03-20,hCoV-19/USA/WA-UW-1688/2020,United States / Washington ATTAAAGG1- G11083T TTT11541- C14805T T17247C G26144T AA29902- >MT326118 EPI_ISL_424193,2020-03-21,hCoV-19/USA/WA-UW-1728/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT326119 EPI_ISL_424194,2020-03-20,hCoV-19/USA/WA-UW-1661/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C379A C1059T C3037T C14408T A23403G G25563T C27213T >MT326120 EPI_ISL_424195,2020-03-21,hCoV-19/USA/WA-UW-1726/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- AAC34HTT C241T C1059T C3037T C11916T C14408T G17679T A23403G G25563T A27515G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT326121 EPI_ISL_424196,2020-03-20,hCoV-19/USA/WA-UW-1666/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C8782T G10523C C17747T A17858G C18060T T28144C A29903- >MT326122 EPI_ISL_424197,2020-03-20,hCoV-19/USA/WA-UW-1640/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCT1- C1059T C3037T C14408T A23403G G25563T G29553A AAAA29900- >MT326123 EPI_ISL_424198,2020-03-20,hCoV-19/USA/WA-UW-1656/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G AAGTCATTT686- C8782T C17747T A17858G C18060T T28144C AA29902- >MT326124 EPI_ISL_424199,2020-03-20,hCoV-19/USA/WA-UW-1672/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- GTCATGTTA510- C8782T A17622G C17747T A17858G C18060T T28144C AAA29901- >MT326125 EPI_ISL_424200,2020-03-20,hCoV-19/USA/WA-UW-1723/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAAT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A -29905AAAAA -29905A >MT326126 EPI_ISL_424201,2020-03-20,hCoV-19/USA/WA-UW-1659/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C1059T C3037T G7560A C14408T C21221T A23403G AA24432TT G25563T G26775T A29869T >MT326127 EPI_ISL_424202,2020-03-20,hCoV-19/USA/WA-UW-1651/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAA29893- >MT326128 EPI_ISL_424203,2020-03-20,hCoV-19/USA/WA-UW-1652/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T G2527A C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT326129 EPI_ISL_424204,2020-03-20,hCoV-19/USA/WA-UW-1698/2020,United States / Washington ATTAAAG1- AACC34HTHH C241T C1059T C3037T G11083T C14408T A23403G G25563T G29553A A29903- >MT326130 EPI_ISL_424205,2020-03-20,hCoV-19/USA/WA-UW-1697/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT326131 EPI_ISL_424206,2020-03-20,hCoV-19/USA/WA-UW-1673/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTT1- C679Y C8782T T15927G C17747T A17858G C18060T C19269T T27722C T28144C ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT326132 EPI_ISL_424207,2020-03-20,hCoV-19/USA/WA-UW-1716/2020,United States / Washington ATTAAAGGTTTAT1- AACC34TTTH C241T C1059T C3037T G7561A C14408T A23403G G25563T G28881A A29866G A29869T AA29902- >MT326133 EPI_ISL_424208,2020-03-20,hCoV-19/USA/WA-UW-1712/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34TTTA C241T C1059T C3037T T4597C C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326134 EPI_ISL_424209,2020-03-20,hCoV-19/USA/WA-UW-1765/2020,United States / Washington ATTAAAGGTTTATACCTTCCCA1- AACC34TTTA C1238T C3593T C4683T C8782T C17747T A17858G C18060T A27200G T28144C T28924C AAAAAAAAAAAAAAAAA29887- >MT326135 EPI_ISL_424210,2020-03-20,hCoV-19/USA/WA-UW-1718/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATG1- T6345C C8092T C8782T C12534T C17747T A17858G C18060T C26037T T28144C >MT326136 EPI_ISL_424211,2020-03-19,hCoV-19/USA/WA-UW-1689/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A G29868D >MT326137 EPI_ISL_424212,2020-03-19,hCoV-19/USA/WA-UW-1715/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G28827T G29553A AAAAAAAAAA29894- >MT326138 EPI_ISL_424213,2020-03-20,hCoV-19/USA/WA-UW-1670/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G A6693G C8782T C14877T A17287G C17747T A17858G C18060T T28144C A29188T A29700G TG29867AV -29905AAAAAAAAAA >MT326139 EPI_ISL_424214,2020-03-20,hCoV-19/USA/WA-UW-1677/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCG1- C503T C1059T C3037T C14408T A23403G G25563T C26408T G29553A >MT326140 EPI_ISL_424215,2020-03-20,hCoV-19/USA/WA-UW-1680/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C379A C1059T T2244C C3037T C14408T A23403G G25563T G29291A AAAA29900- >MT326141 EPI_ISL_424216,2020-03-19,hCoV-19/USA/WA-UW-1690/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCA1- G295C C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT326142 EPI_ISL_424217,2020-03-19,hCoV-19/USA/WA-UW-1684/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCA1- C8782T C13743T C17747T A17858G C18060T T28144C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT326143 EPI_ISL_424218,2020-03-20,hCoV-19/USA/WA-UW-1682/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGT1- G1401A C8782T C17747T A17858G C18060T T28144C C29870H >MT326144 EPI_ISL_424219,2020-03-20,hCoV-19/USA/WA-UW-1695/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C A29866V -29905A -29905A -29905A -29905A -29905A >MT326145 EPI_ISL_424220,2020-03-21,hCoV-19/USA/WA-UW-1729/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCG1- C4990T C8782T G15138A C17747T A17858G C18060T C19325T A27525G T28144C AGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29797- >MT326146 EPI_ISL_424221,2020-03-21,hCoV-19/USA/WA-UW-1748/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACT1- C1059T C3037T C14408T A23403G G25563T G29553A >MT326147 EPI_ISL_424222,2020-03-20,hCoV-19/USA/WA-UW-1700/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C8782T C17747T A17858G C18060T T28144C G29868V >MT326148 EPI_ISL_424223,2020-03-21,hCoV-19/USA/WA-UW-1744/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAA1- A1098G C8782T C17747T A17858G C18060T T28144C AAAAA29899- >MT326149 EPI_ISL_424224,2020-03-21,hCoV-19/USA/WA-UW-1745/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- A4236G A8031G G11083T C14805T T25655C G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT326150 EPI_ISL_424225,2020-03-21,hCoV-19/USA/WA-UW-1707/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTA1- A35T C37H C241T T833C C1059T C3037T C11455T C14408T A23403G G25563T C27964T A29903- >MT326151 EPI_ISL_424226,2020-03-21,hCoV-19/USA/WA-UW-1705/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGAC1- A1098G C8782T C17747T A17858G C18060T G25606T T28144C AA29902- >MT326152 EPI_ISL_424227,2020-03-21,hCoV-19/USA/WA-UW-1706/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACA1- C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A -29905A -29905A -29905A -29905A -29905A -29905AA >MT326153 EPI_ISL_424228,2020-03-21,hCoV-19/USA/WA-UW-1702/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C40T C8782T C17747T A17858G C18060T T28144C -29904AAA >MT326154 EPI_ISL_424229,2020-03-21,hCoV-19/USA/WA-UW-1724/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C13608T C14408T A23403G G25563T G29553A AAAAAAAAA29895- >MT326155 EPI_ISL_424230,2020-03-21,hCoV-19/USA/WA-UW-1709/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTAT1- C5784T C8782T C17747T A17858G C18060T G26730A T28144C -29905A -29905A -29905A -29905AAA >MT326156 EPI_ISL_424231,2020-03-21,hCoV-19/USA/WA-UW-1731/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A229C TCT232CAC C832T T3160C C8782T C17747T A17858G C18060T T28144C G29744T A29866G A29869G A29903- >MT326157 EPI_ISL_424232,2020-03-21,hCoV-19/USA/WA-UW-1708/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGG1- C8782T C10818T C14937T C17747T A17858G C18060T G25311A T28144C A29869T >MT326158 EPI_ISL_424233,2020-03-21,hCoV-19/USA/WA-UW-1772/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACT1- C241T C3037T C14408T A20268G A23403G G25785C G29734C -29905A -29905A -29905A >MT326159 EPI_ISL_424234,2020-03-21,hCoV-19/USA/WA-UW-1722/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T G7560A C14408T G19999T G21452T A23403G G25563T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT326160 EPI_ISL_424235,2020-03-21,hCoV-19/USA/WA-UW-1733/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C241T C1059T C3037T G6653A C14408T A23403G A25060G G25563T G29553A >MT326161 EPI_ISL_424236,2020-03-21,hCoV-19/USA/WA-UW-1732/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGT1- C1059T C3037T C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT326162 EPI_ISL_424237,2020-03-21,hCoV-19/USA/WA-UW-1739/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C6040T C14408T A23403G G25563T AAAAAAAAAAA29893- >MT326163 EPI_ISL_424238,2020-03-21,hCoV-19/USA/WA-UW-1741/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAA1- C1059T C3037T C14408T G16912T A23403G G25563T G29553A G29864A TG29867AA C29870A >MT326164 EPI_ISL_424239,2020-03-21,hCoV-19/USA/WA-UW-1750/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- A34H C241T C1059T C3037T G7560A C14408T G19999T G21452T A23403G G25563T A29903- >MT326165 EPI_ISL_424240,2020-03-21,hCoV-19/USA/WA-UW-1730/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACT1- G3231T C8782T C17747T A17858G C18060T T28144C GA29868CT A29903- >MT326166 EPI_ISL_424241,2020-03-21,hCoV-19/USA/WA-UW-1735/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAA1- C1929T C5784T C8782T C17747T A17858G C18060T C20646T C23525T G26730A T28144C A29866G GA29868VT A29903- >MT326167 EPI_ISL_424242,2020-03-21,hCoV-19/USA/WA-UW-1753/2020,United States / Washington ATTAA1----C G7T AACC34HTHH C241T C1059T C2716T C3037T C14408T G16912T A23403G G25563T G26775T G29553A AA29902- >MT326168 EPI_ISL_424243,2020-03-21,hCoV-19/USA/WA-UW-1756/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATA1- C8782T C17747T A17858G C18060T T28144C G29864A TG29867AV C29870H >MT326169 EPI_ISL_424244,2020-03-22,hCoV-19/USA/WA-UW-1770/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACG1- C241T C1059T C3037T C5005T C14408T A23403G G25563T A29903- >MT326170 EPI_ISL_424245,2020-03-21,hCoV-19/USA/WA-UW-1762/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C1059T C3037T C14408T A23403G G25563T G29553A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT326171 EPI_ISL_424246,2020-03-21,hCoV-19/USA/WA-UW-1758/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904AAAAAA >MT326172 EPI_ISL_424247,2020-03-21,hCoV-19/USA/WA-UW-1760/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T G14772T C17747T A17858G C18060T T28144C TG29867AA >MT326173 EPI_ISL_424248,2020-03,hCoV-19/USA/UNKNOWN-UW-1773/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAA1- C3037T C14408T G17964A A23403G C23575T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT326174 EPI_ISL_424166,2020-03-19,hCoV-19/USA/WA-UW-1620/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C241T C379A C1059T T2244C C3037T A10761G C14408T A23403G G25563T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT326175 EPI_ISL_424167,2020-03-19,hCoV-19/USA/WA-UW-1616/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAA1- C1059T C3037T AGG13512TTA C14408T A23403G G25563T G29553A TGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29829- >MT326176 EPI_ISL_424168,2020-03-19,hCoV-19/USA/WA-UW-1638/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTA1- G8602A C8782T C17747T A17858G C18060T C25418A G26152A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT326177 EPI_ISL_424169,2020-03-19,hCoV-19/USA/WA-UW-1538/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- TCAT221GTGA C8782T C17747T A17858G C18060T T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT326178 EPI_ISL_424170,2020-03-19,hCoV-19/USA/WA-UW-1595/2020,United States / Washington C241T C1059T A2018G C3037T T3628C C14408T A23403G C25549T G25563T >MT326179 EPI_ISL_424171,2020-03-19,hCoV-19/USA/WA-UW-1572/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACG1- AG226GC T232- TAGG234AGAT C241T C1059T T2752C A2952G AG2956TT C3037T T12133A T12136A T12139A AGG13512TTA C14408T T14769G A23403G T23473C C25096G G25563T AAT26738GGC G29553A G29868C >MT326180 EPI_ISL_424172,2020-03-19,hCoV-19/USA/WA-UW-1575/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C222- C241T C1059T C3037T C6040T G7675T C10626T C14408T A23403G G25563T A29869T >MT326181 EPI_ISL_424173,2020-03-14,hCoV-19/USA/IL-UW-1311/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAG1- C8782T C17747T A17858G C18060T T28144C AA29902- >MT326182 EPI_ISL_424174,2020-03-13,hCoV-19/USA/CT-UW-1365/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGC1- C241T G261T C1059T C3037T G11083T G11521T AGG13512TTA C14408T G17278T A23403G G25563T A27333T G29864A >MT326183 EPI_ISL_424175,2020-03-17,hCoV-19/USA/WA-UW-1362/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- T150C T153G C8782T G14335T C17747T A17858G C18060T T28144C >MT326184 EPI_ISL_424176,2020-03-17,hCoV-19/USA/WA-UW-1472/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C28697T >MT326185 EPI_ISL_424178,2020-03-17,hCoV-19/USA/WA-UW-1342/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTG1- C96A C98T CGG100ATA C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A -29904AAAA -29905A -29905AAAAAAA >MT326186 EPI_ISL_424179,2020-03-17,hCoV-19/USA/WA-UW-1341/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACAC1- A647M C8782T C17747T A17858G C18060T T27056C T28144C TG29867AA C29870A >MT326187 EPI_ISL_424180,2020-03-18,hCoV-19/USA/WA-UW-1294/2020,United States / Washington A1G T3C C3587T C8782T C17747T A17858G C18060T T28144C -29905A -29905A -29905A -29905A -29905A -29905AAAAA >MT326188 EPI_ISL_424181,2020-03-16,hCoV-19/USA/UNKNOWN-UW-1402/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- GA458CT CT466AC T469A C8782T C13592T C17747T A17858G C18060T C19151T T23010C T28144C A29903- >MT326189 EPI_ISL_424182,2020-03-18,hCoV-19/USA/WA-UW-1478/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T -29905A -29905A -29905A -29905ATA >MT326190 EPI_ISL_424183,2020-03-18,hCoV-19/USA/WA-UW-1436/2020,United States / Washington ATTA1GAGT A35T C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904GA -29905AAAAA -29905A >MT326191 EPI_ISL_424184,2020-03-18,hCoV-19/USA/WA-UW-1422/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAA1- TCT83CTC GG90-C C241T C1059T C3037T C14408T A23403G G25563T G29553A A29865C A29869T -29905A -29905AGAGAGAG >MT327745 ,2020-03-17,SARS-CoV-2/human/TUR/ERAGEM-001/2020,Turkey ATTA1- G1397A G11083T G23876A T28688C C29563T G29742T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT328032 ,2020-03-18,SARS-CoV-2/human/GRC/10/2020,Greece C241T C3037T C14408T C14786T T18126C A23403G GGG28881AAC >MT328033 ,2020-03-18,SARS-CoV-2/human/GRC/12/2020,Greece C241T C3037T C14408T A23403G C25771A GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT328034 ,2020-03-18,SARS-CoV-2/human/GRC/16/2020,Greece C8782T C9430T T9477A C14805T A22151G G25979T T28144C C28657T C28863T AAAAAAAAAAAAAAAAAAA29885- >MT328035 ,2020-03-18,SARS-CoV-2/human/GRC/13/2020,Greece C241T C3037T C14408T A23403G GGG28881AAC C28887T >MT334522 ,2020-03-05,SARS-CoV-2/human/USA/UT-00001/2020,United States / UT ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G11083T C18060T C26326T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT334523 ,2020-03-05,SARS-CoV-2/human/USA/UT-00003/2020,United States / UT AT1- C8782T C17747T A17858G C18060T T28144C >MT334524 ,2020-03-05,SARS-CoV-2/human/USA/UT-00004/2020,United States / UT ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T T28144C >MT334525 ,2020-03-07,SARS-CoV-2/human/USA/UT-00005/2020,United States / UT ATT1- C241T C379A C1059T C3037T C14408T A23403G G25563T >MT334526 ,2020-03-07,SARS-CoV-2/human/USA/UT-00006/2020,United States / UT ATTAAAG1- C241T C379A C1059T C3037T C14408T A23403G G25563T >MT334527 EPI_ISL_417026,2020-03-20,SARS-CoV-2/human/USA/UT-00008/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C3037T C14408T A23403G C26684T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT334528 EPI_ISL_417027,2020-03-20,SARS-CoV-2/human/USA/UT-00009/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G C29870A >MT334529 EPI_ISL_417958,2020-03-10,SARS-CoV-2/human/USA/UT-00010/2020,United States / Utah G1440A G2891A C7011T >MT334530 EPI_ISL_417959,2020-03-11,SARS-CoV-2/human/USA/UT-00011/2020,United States / Utah ATTA1- C241T C3037T G9209C C14408T A23403G >MT334531 EPI_ISL_417960,2020-03-12,SARS-CoV-2/human/USA/UT-00012/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T T28144C >MT334532 EPI_ISL_417962,2020-03-24,SARS-CoV-2/human/USA/UT-00013/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAAC1- C8782T C17747T A17858G C18060T T28144C >MT334533 EPI_ISL_417964,2020-03-13,SARS-CoV-2/human/USA/UT-00014/2020,United States / Utah AT1-C C8782T C17747T A17858G C18060T T28144C G28727T >MT334534 EPI_ISL_417965,2020-03-24,SARS-CoV-2/human/USA/UT-00015/2020,United States / Utah ATTAAAGG1- C8782T C17747T A17858G C18060T T28144C G28727T >MT334535 EPI_ISL_417966,2020-03-13,SARS-CoV-2/human/USA/UT-00016/2020,United States / Utah ATT1- C8782T C17747T A17858G C18060T T28144C >MT334536 EPI_ISL_417968,2020-03-24,SARS-CoV-2/human/USA/UT-00017/2020,United States / Utah ATTA1- C8782T C17747T A17858G C18060T T28144C >MT334537 EPI_ISL_418962,2020-03-13,SARS-CoV-2/human/USA/UT-00019/2020,United States / Utah AT1- C241T C379A C1059T C3037T C14408T A23403G G25563T >MT334538 EPI_ISL_417028,2020-03-20,SARS-CoV-2/human/USA/UT-00020/2020,United States / Utah C1102T T2992C C8782T C17747T A17858G C18060T T28144C C29774T >MT334539 EPI_ISL_418963,2020-03-14,SARS-CoV-2/human/USA/UT-00021/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T GTT669- C1059T C1887T C3037T C14408T A17615G A23403G G24794T G25563T >MT334540 EPI_ISL_418964,2020-03-14,SARS-CoV-2/human/USA/UT-00022/2020,United States / Utah AT1- C241T C1059T C1887T C3037T C14408T A17615G A23403G G24794T G25563T >MT334541 EPI_ISL_418965,2020-03-11,SARS-CoV-2/human/USA/UT-00023/2020,United States / Utah A1- C241T C3037T C14408T C16289T A23403G G25429T C29870A >MT334542 EPI_ISL_418967,2020-03-11,SARS-CoV-2/human/USA/UT-00025/2020,United States / Utah C241T C1059T C3037T C14408T A23403G G25563T C29870A >MT334543 EPI_ISL_417970,2020-03-16,SARS-CoV-2/human/USA/UT-00027/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27964T C29870A >MT334544 EPI_ISL_417971,2020-03-19,SARS-CoV-2/human/USA/UT-00028/2020,United States / Utah C241T C1059T C3037T C14408T A23403G C24378T G25563T C27964T >MT334545 EPI_ISL_417973,2020-03-19,SARS-CoV-2/human/USA/UT-00031/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T TTA516- C3037T C14408T A23403G A29869T >MT334546 EPI_ISL_417974,2020-03-19,SARS-CoV-2/human/USA/UT-00032/2020,United States / Utah ATTA1- C241T C3037T C14408T A23403G >MT334547 EPI_ISL_417976,2020-03-19,SARS-CoV-2/human/USA/UT-00033/2020,United States / Utah C241T C1059T C3037T C6445T C14408T C17639T G22335T A23403G G25563T >MT334548 EPI_ISL_417977,2020-03-20,SARS-CoV-2/human/USA/UT-00034/2020,United States / Utah ATTA1- C241T C1059T C3037T C3165T C11919T C14408T C21998T A23403G G25563T >MT334549 ,2020-03-12,SARS-CoV-2/human/USA/UT-00087/2020,United States / UT ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C379A C1059T C3037T C14408T A17615G T20151A A23403G C29870A >MT334550 EPI_ISL_420803,2020-03-12,SARS-CoV-2/human/USA/UT-00089/2020,United States / Utah ATTAAAGGTTTAT1- C241T C3037T C14408T A23403G >MT334551 EPI_ISL_420804,2020-03-14,SARS-CoV-2/human/USA/UT-00090/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G C29870A >MT334552 EPI_ISL_420805,2020-03-14,SARS-CoV-2/human/USA/UT-00159/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C12357T C21855T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT334553 EPI_ISL_420806,2020-03-14,SARS-CoV-2/human/USA/UT-00284/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C8782T C17747T A17858G C18060T T28144C C29870A >MT334554 EPI_ISL_420807,2020-03-23,SARS-CoV-2/human/USA/UT-00287/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1403T C3037T C14408T A23403G G25552T GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT334555 EPI_ISL_420808,2020-03-24,SARS-CoV-2/human/USA/UT-00288/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C G28077C T28144C A29700G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT334556 EPI_ISL_420809,2020-03-24,SARS-CoV-2/human/USA/UT-00289/2020,United States / Utah ATT1- C241T C1059T C3037T C14408T A23403G G25563T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT334557 EPI_ISL_420810,2020-03-27,SARS-CoV-2/human/USA/UT-00290/2020,United States / Utah C40T C241T C1059T C3037T C14408T C19366T G22468T A23403G G23593T G25250T G25563T C27964T C29353T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT334558 EPI_ISL_420811,2020-03-27,SARS-CoV-2/human/USA/UT-00291/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T G22468T A23403G G23593T G25250T G25563T C27964T C29353T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT334559 EPI_ISL_420812,2020-03-27,SARS-CoV-2/human/USA/UT-00297/2020,United States / Utah ATTA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT334560 EPI_ISL_420813,2020-03-27,SARS-CoV-2/human/USA/UT-00300/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A7585C C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT334561 MT535472，EPI_ISL_420814,2020-03-27,SARS-CoV-2/human/USA/UT-00301/2020,United States / Utah ATTA1- C241T C1059T C3037T C14408T A23403G C24378T G25563T C27964T AAAAAAAAAAAAAAAAAAAAA29883- >MT334562 ,2020-03-25,SARS-CoV-2/human/USA/UT-00302/2020,United States / UT ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G18679C T24085C C24378T G25563T C27964T TG29867AA C29870A >MT334563 MT535473，EPI_ISL_420815,2020-03-24,SARS-CoV-2/human/USA/UT-00303/2020,United States / Utah A1- C241T C1059T C3037T T11131A C14408T A23403G C24378T G25563T C27964T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT334564 EPI_ISL_420816,2020-03-24,SARS-CoV-2/human/USA/UT-00342/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G11083T C14408T A23403G C29870A >MT334565 EPI_ISL_420817,2020-03-24,SARS-CoV-2/human/USA/UT-00344/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A25048T G29778T C29870A >MT334566 MT535474，EPI_ISL_420818,2020-03-25,SARS-CoV-2/human/USA/UT-00345/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T A29683G A29792G C29870A >MT334567 MT535475，EPI_ISL_420819,2020-03-26,SARS-CoV-2/human/USA/UT-00346/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C29870A >MT334568 MT535479，EPI_ISL_420820,2020-03-25,SARS-CoV-2/human/USA/UT-00347/2020,United States / Utah ATTAAAGGTT1- C241T C3037T C14408T A23403G C29870A >MT334569 MT535480，EPI_ISL_420821,2020-03-26,SARS-CoV-2/human/USA/UT-00348/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C2416T C3037T C14408T A23403G G25563T C29614T C29870A >MT334570 MT535477，EPI_ISL_420822,2020-03-25,SARS-CoV-2/human/USA/UT-00349/2020,United States / Utah ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T A23403G G25563T G26713T C27964T >MT334571 MT535478，EPI_ISL_420823,2020-03-27,SARS-CoV-2/human/USA/UT-00350/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T G20352C A23403G G25563T C27964T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT334572 MT535476，EPI_ISL_420824,2020-03-26,SARS-CoV-2/human/USA/UT-00352/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T11131A C14408T A23403G C24378T G25563T C27964T C29870A >MT334573 MT535481，EPI_ISL_420825,2020-03-25,SARS-CoV-2/human/USA/UT-00361/2020,United States / Utah ATTAAAGGTTTATAC1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT339039 EPI_ISL_424668,2020-03-16,SARS-CoV-2/human/USA/AZ-ASU2922/2020,United States / Arizona ATTAAAG1- C8782T C17747T A17858G C18060T A22005G T28144C >MT339040 EPI_ISL_424669,2020-03-16,SARS-CoV-2/human/USA/AZ-ASU2923/2020,United States / Arizona ATTAAAGGTTTATAC1- C241T C3037T C14408T A23403G TTCTTTTCTTGGCACTGATAACACTCGCTACTTGTGAGCTTTATCACTACCAAGAGTGTGTTAGAGGTACAACAGTACTTT27404- GGG28881AAC >MT339041 EPI_ISL_424671,2020-03-17,SARS-CoV-2/human/USA/AZ-ASU2936/2020,United States / Arizona C241T C1059T C3037T C14408T A23403G G25563T >MT339043 EPI_ISL_419708,2020-03-12,SARS-CoV-2/human/USA/VA-DCLS-0014/2020,United States / Virginia ATT1- C241T C1059T C3037T C3253T C14408T A23403G G25563T TGTTGCGGCAATAGTGTTTATAACACTTTGCTTCACACTC27702- C29870M >MT344944 EPI_ISL_426416,2020-03-08,SARS-CoV-2/human/USA/CT_9849/2020,United States / CT C241Y C1059Y C8782T G13571K T16857Y C17747Y A17858G C18060T A23403R G24933K T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT344945 EPI_ISL_426417,2020-03-07,SARS-CoV-2/human/USA/GA_2070/2020,United States / GA T490A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AAAAAAAAAAAAAAAAAAAAA29883- >MT344946 EPI_ISL_426418,2020-03,SARS-CoV-2/human/USA/GA_2147/2020,United States / GA C6312A G11083T C13730T C23929T C28311T AAAAAAAAAAAAAAAAAAAAA29883- >MT344947 EPI_ISL_426419,2020-03,SARS-CoV-2/human/USA/GA_2275/2020,United States / GA C241T C3037T C14408T C14809Y C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344948 EPI_ISL_426420,2020-03-05,SARS-CoV-2/human/USA/HI_4970/2020,United States / HI C241T C3037T C14408T A20268G A23403G C28854T AAAAAAAAAAAAAAAAAAAAA29883- >MT344949 EPI_ISL_426421,2020-03-07,SARS-CoV-2/human/USA/HI_7881/2020,United States / HI C8717Y C8782T C14724T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT344950 EPI_ISL_426422,2020-03-07,SARS-CoV-2/human/USA/IN_72003/2020,United States / IN C241T C2416T C3037T C14408T A23403G C25169T G25563T CGAGGCCACGCGGAGTACGAT29733- AAAAAAAAAAAAAAAAAAAAA29883- >MT344951 EPI_ISL_426423,2020-03-08,SARS-CoV-2/human/USA/IN_82003/2020,United States / IN C241T C2416T C3037T C14408T A23403G C25169T G25563T CGAGGCCACGCGGAGTACGAT29733- AAAAAAAAAAAAAAAAAAAAA29883- >MT344952 EPI_ISL_426424,2020-03-09,SARS-CoV-2/human/USA/IN_92003/2020,United States / IN C203Y C241T C2416T C3037T A4364M C14408T A23403G C25169T G25563T CGAGGCCACGCGGAGTACGAT29733- AAAAAAAAAAAAAAAAAAAAA29883- >MT344953 EPI_ISL_426425,2020-03-04,SARS-CoV-2/human/USA/MD_0027/2020,United States / MD C241T G558K C3037T C14408T G16508K C18877T A23403G G24933K G25563T C26735Y T29244Y AAAAAAAAAAAAAAAAAAAAA29883- >MT344954 EPI_ISL_426426,2020-03-05,SARS-CoV-2/human/USA/MN_0100/2020,United States / MN A6035G C8782T A16467G C17747T A17858G C18060T C23185T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT344955 EPI_ISL_426430,2020-03-08,SARS-CoV-2/human/USA/OH_0019/2020,United States / OH C241T GTTATG515- C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344956 EPI_ISL_426431,2020-03-07,SARS-CoV-2/human/USA/OH_0020/2020,United States / OH C241T GTTATG515- C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344957 EPI_ISL_426432,2020-03-07,SARS-CoV-2/human/USA/PA_2734/2020,United States / PA C241T GTTATG515- C3037T C14408T C18877T A23403G C25516T G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344958 EPI_ISL_426433,2020-03-07,SARS-CoV-2/human/USA/PA_2735/2020,United States / PA C241T GTTATG515- C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344959 EPI_ISL_426434,2020-03-08,SARS-CoV-2/human/USA/PA_2887/2020,United States / PA C241T C1059T C3037T C13994Y C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT344960 EPI_ISL_426435,2020-03-09,SARS-CoV-2/human/USA/RI_0882/2020,United States / RI C241T C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAA29883- >MT344961 EPI_ISL_426429,2020-03-07,SARS-CoV-2/human/USA/NV_0016/2020,United States / NV ATG1605- C20270T A29683T AAAAAAAAAAAAAAAAAAAAA29883- >MT344962 EPI_ISL_426427,2020-03-07,SARS-CoV-2/human/USA/MN_0101/2020,United States / MN T514C ATG1605- C17410T AAAAAAAAAAAAAAAAAAAAAAA29881- >MT344963 EPI_ISL_426428,2020-03-08,SARS-CoV-2/human/USA/NC_0025/2020,United States / NC G204K C241T C2416T C3037T G3638R C4543T G11042S C14408T A23403G T24412Y G25563T G26233T AAAAAAAAAAAAAAAAAAAAA29883- >MT345798 EPI_ISL_426084,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2091/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT345799 EPI_ISL_426103,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2169/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCG1- C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345800 EPI_ISL_426082,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2082/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGT1- C8782T G17427T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345801 EPI_ISL_426092,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2131/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAA1- C241T A761G C1059T C3037T C14408T G15760A A23403G G25563T AAAA29900- >MT345802 ,2020-03-21,SARS-CoV-2/human/USA/UNKNOWN-UW-2069/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T -29904GAG >MT345803 EPI_ISL_426057,2020-03-21,SARS-CoV-2/human/USA/ID-UW-2127/2020,United States / Idaho ATTAAA1- C241T C3037T C5239T C8730T C14408T T15264C A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT345804 EPI_ISL_426079,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2072/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCA1- C1059T C3037T C14408T A23403G G25563T G29553A G29864A TG29867AA C29870A >MT345805 EPI_ISL_426081,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2078/2020,United States / Washington ATTAAAG1- AACC34TTTA C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A AAAAAAAAAAAA29892- >MT345806 EPI_ISL_426083,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2087/2020,United States / Washington ATTAAAGGTTTATA1- C16G C19A AAC34TTY C241T C1059T C3037T C14408T A23403G G25563T C28826T -29905AAA -29905AAAA >MT345807 EPI_ISL_426080,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2074/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTT1- C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345808 EPI_ISL_426093,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2132/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGT1- C241T C1059T C3037T C14408T A23403G G25563T C27804T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345809 EPI_ISL_426091,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2119/2020,United States / Washington A1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345810 ,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2086/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTT1- C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345811 EPI_ISL_426089,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2108/2020,United States / Washington ATTAAAGGTTTATA1- C241T C1059T C3037T G3259T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345812 EPI_ISL_426085,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2094/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904TA -29905A -29905ATA -29905A -29905AAA >MT345813 ,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2115/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGA1- C1059T C3037T C14408T T21112C A23403G G25563T T27501C G29468C G29553A TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT345814 EPI_ISL_426087,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2104/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTA1- C241T C1059T C3037T C14408T C14697T A23403G G25563T G29553A A29903- >MT345815 EPI_ISL_426094,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2137/2020,United States / Washington ATTAAAGGTTTATACCT1- AACC34HTTH A187G C241T C1616T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT345816 ,2020-03-23,SARS-CoV-2/human/USA/UNKNOWN-UW-2139/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C1059T C3037T T3312C C14408T A23403G G25563T AAAAAAA29897- >MT345817 EPI_ISL_426058,2020-03-24,SARS-CoV-2/human/USA/ID-UW-2134/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA T153G C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAA29893- >MT345818 ,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2109/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTT1- C1059T C3037T TG13686CA A13691T C13694G C14408T G22817T A23403G G25563T G29553A A29866C A29869T A29903- >MT345819 EPI_ISL_426090,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2112/2020,United States / Washington ATTAAAGGTTT1- C241T C1059T A2651G C3037T C6040T C14408T A23403G G25563T -29904AAAAAAAA >MT345820 ,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2129/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTG1- C2652T C8782T C17747T A17858G C18060T T18699C G22988A T23560C T28144C GGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29861- >MT345821 EPI_ISL_426086,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2100/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCC1- C1059T C3037T C6255T C14408T C21077T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345822 EPI_ISL_426096,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2141/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- G1598A C6310T C7267T C8782T C17747T A17858G C18060T A18802G G27327T T28144C G28378T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345823 EPI_ISL_426102,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2164/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C8782T C12025T C17747T A17858G C18060T T28144C G28703T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345824 EPI_ISL_426095,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2140/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCG1- C241T C1059T C3037T C8078T C14408T A23403G G25563T G29553A AAAAAAAAAA29894- >MT345825 EPI_ISL_426099,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2145/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- A31T AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T AAAA29900- >MT345826 EPI_ISL_426098,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2144/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAAC1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT345827 EPI_ISL_426100,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2146/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34CTTT C241T C379A C1059T T2244C C3037T C14408T A23403G G25563T G29864A TG29867AA C29870A >MT345828 EPI_ISL_426060,2020-03-23,SARS-CoV-2/human/USA/ID-UW-2160/2020,United States / Idaho ATTAAAGGTTT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345829 EPI_ISL_426097,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2142/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- TCT83CTC GG90-C T150C T153G C241T C379A C1059T T2244C C3037T A10761G C14408T A23403G G25563T TG29867AA C29870A -29904AAAAAAAAAAAAAA >MT345830 EPI_ISL_426101,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2149/2020,United States / Washington ATTAAAGGTTTATAC1- AACC34TTTA C241T C1059T C3037T C9951T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT345831 EPI_ISL_426059,2020-03-23,SARS-CoV-2/human/USA/ID-UW-2159/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACA1- C556T T833C C1059T C1102A T1104A C3037T C14408T C15720T G21641T AA22115GT A23403G G25563T C27964T >MT345832 EPI_ISL_426107,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2181/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAG1- A31T AAC34TTT A4236G A8031G G11083T C14805T T25655C G26144T G27382T AAAAAAAAAAA29893- >MT345833 EPI_ISL_426111,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2203/2020,United States / Washington ATTAAAGGTT1- C8782T C17747T A17858G C18060T T28144C >MT345834 EPI_ISL_426126,2020-03-26,SARS-CoV-2/human/USA/WA-UW-2240/2020,United States / Washington ATTAAAGG1- T10G A12T AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T A------29903GTATGTC >MT345835 EPI_ISL_426127,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2244/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- ACC35TYH C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C29250T -29905AT -29906A >MT345836 EPI_ISL_426119,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2228/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA T490A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G A29903- >MT345837 ,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2225/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAGAACTCGAAGGCATTCAGTACGGTCGTAGTG1- C8782T C10623T C17747T A17858G C18060T T28144C A29903- >MT345838 EPI_ISL_426124,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2236/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTG1- C1059T C3037T C14408T A23403G C25469T G25563T -29904AAAAAA -29905A >MT345839 ,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2220/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACG1- C3037T AGG13512TTA C14408T C15763T A23403G AAAAAAA29897- >MT345840 EPI_ISL_426130,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2249/2020,United States / Washington ATTAAA1- AACC34HTTH C8782T C17747T A17858G C18060T T22516C A27924G T28144C AAAA29900- >MT345841 EPI_ISL_426129,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2247/2020,United States / Washington ATTAAAGGTT1------CTYY AAC34HWY C8782T C17747T A17858G C18060T A27924G T28144C AAAAAAAAAAAAAAA29889- >MT345842 EPI_ISL_426131,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2250/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTC1- C8782T C17747T A17858G C18060T A27924G T28144C A29903- >MT345843 EPI_ISL_426105,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2179/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C6040T C14408T A23403G G25563T TAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29817- >MT345844 EPI_ISL_426106,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2180/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTG1- C96A C98T CGG100ATA T150C T153G G237D C241T C3037T G3871T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT345845 EPI_ISL_426104,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2177/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1-------------------------------TT C36T C241T C1059T C3037T TA14222BM C14225B C14408T A23403G G25563T T26602H G29553A TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT345846 EPI_ISL_426122,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2234/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A39T G219T C241T C1059T C3037T C14408T A23403G G25563T AAA29901- >MT345847 EPI_ISL_426132,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2253/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1059T C3037T A10579G C14408T A23403G G25563T AAA29872TTT A29903- >MT345848 EPI_ISL_426125,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2238/2020,United States / Washington ATTAAAGGTTT1- TT76AC C84G TCT232YMY C241T C1059T C3037T G3410A C14408T A23403G G25563T G29553A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT345849 EPI_ISL_426123,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2235/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAA1--------------------------G AAA29TCT AACC34TTTA C241T C1059T C1329T C3037T A6277G G8102T C14408T G14712A C14877T A23403G G25563T AAAAAA29898- >MT345850 EPI_ISL_426110,2020-03-24,SARS-CoV-2/human/USA/WA-UW-2193/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C8782T C17747T A17858G C18060T T28144C TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT345851 EPI_ISL_426121,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2232/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- C3037T C14408T C18877T A23403G G25563T AAAAAAAAA29895- >MT345852 EPI_ISL_426109,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2192/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T T8883C T8885W C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345853 EPI_ISL_426120,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2230/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- C8782T C17550T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT345854 EPI_ISL_426118,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2219/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34HTTH C241T C1059T C3037T C6040T C14408T A23403G G25563T AAAAAAAAAAA29893- >MT345855 EPI_ISL_426128,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2245/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T AAGTCATTT686- C1059T C3037T C14408T G19656T A23403G C24784T G25563T A26433G AAAA29900- >MT345856 EPI_ISL_426117,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2218/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34WWY C241T C3037T C14408T C18877T A23403G G25563T >MT345857 EPI_ISL_426062,2020-03-24,SARS-CoV-2/human/USA/ID-UW-2198/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGT1- G285C T287G G714C T718A A720C T833C C1059T C3037T C14408T A23403G G25563T C27964T G28655T >MT345858 EPI_ISL_426061,2020-03-23,SARS-CoV-2/human/USA/ID-UW-2174/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T T833C C1059T C3037T C14408T C15928T A23403G G25563T C27964T -29904AAAAAAAAAA >MT345859 EPI_ISL_426116,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2215/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT345860 EPI_ISL_426115,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2214/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTG1- A229C TCT232CAC C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAA29896- >MT345861 EPI_ISL_426113,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2212/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- A35W C241T C1059T C3037T C3698A C14408T A23403G G25563T G29553A AAAA29900- >MT345862 EPI_ISL_426114,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2213/2020,United States / Washington ATTAAAGGTTTATACCT1- CCAGG20AACCA TCTAGG232---GAT C241T C1059T C3037T C14408T A23403G G25563T -29905ADAG >MT345863 ,2020-03-23,SARS-CoV-2/human/USA/ID-UW-2173/2020,United States / ID ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTG1- T833C C1059T C3037T C14408T A23403G G25563T C27964T TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT345864 ,2020-03-20,SARS-CoV-2/human/USA/ID-UW-2195/2020,United States / ID ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTGCACCTCATGGTCATGTTATGGTTGAGCTGGTAGCAG1- T833C C1059T C3037T A3722G C14408T A23403G G25563T G25784C C27964T TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT345865 EPI_ISL_426112,2020-03-25,SARS-CoV-2/human/USA/WA-UW-2208/2020,United States / Washington ATTAAAGGTTTATACCT1- AACC34TTTH C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAA29886- >MT345866 EPI_ISL_426063,2020-03-23,SARS-CoV-2/human/USA/ID-UW-2255/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA AC163CG GT167CA C241T T833C C1059T C3037T C14408T A23403G C23557T G25563T C27964T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345867 EPI_ISL_426133,2020-03-23,SARS-CoV-2/human/USA/WA-UW-2258/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA T7513C C8782T C17747T A17858G C18060T T28144C A29903- >MT345868 ,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4344/2020,United States / CT ATTAAAGGTTTATACCTTCCCA1- A31T C36T C241T C1059T C3037T C10851T C14408T A23403G G25563T -29904AAAAAAAA >MT345869 ,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4346/2020,United States / CT ATTAAA1- A31T AC35WT C241T C1059T C3037T C3140T T9995G C14408T C16260T A23403G G25563T C28821A -29904AAAAAAA >MT345870 ,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4347/2020,United States / CT ATTAAAGGTTTATACCTTCCCAGGTAACAA1- AAC34TTT C241T C1059T C3037T C14408T TGG21294AAA A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT345871 EPI_ISL_426064,2020-03-27,SARS-CoV-2/human/USA/ID-UW-4355/2020,United States / Idaho A1G C36T C241T T833C C1059T C3037T C6354T C14408T A23403G A24014G G25563T C27964T >MT345872 EPI_ISL_426065,2020-03-27,SARS-CoV-2/human/USA/ID-UW-4357/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T G29862A G29864A TG29867AA C29870A >MT345873 ,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4366/2020,United States / CT ATTAAAGGTT1- A31T AAC34TTT C241T C1059T C3037T C11916T C13515T C14408T C18998T A23403G G25563T G29540A -29904AAAAAAAAAAAAAA >MT345874 ,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4372/2020,United States / CT ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C3768T C10851T C14408T A23403G G25563T C25584T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345875 EPI_ISL_426066,2020-03-28,SARS-CoV-2/human/USA/ID-UW-4375/2020,United States / Idaho ATTAAAGGTTTA1- C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T -29904AAAAAAA >MT345876 EPI_ISL_426067,2020-03-28,SARS-CoV-2/human/USA/ID-UW-4378/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AGTGTAC29756- AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345877 EPI_ISL_426068,2020-03-27,SARS-CoV-2/human/USA/ID-UW-4380/2020,United States / Idaho A31T C36T C241T C1059T C3037T C11289T C13170T CC14407TT A23403G G25563T >MT345878 EPI_ISL_426076,2020-03-29,SARS-CoV-2/human/USA/OR-UW-4388/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C36T C241T C1059T C3037T C14408T A23403G G25563T TG29867AA C29870A A29903- >MT345879 EPI_ISL_426069,2020-03-28,SARS-CoV-2/human/USA/ID-UW-4396/2020,United States / Idaho ATTAAAGGTTTATAC1- C241T T833C C1059T C3037T G5273A C14408T A23403G G25563T C27964T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345880 EPI_ISL_426070,2020-03-28,SARS-CoV-2/human/USA/ID-UW-4400/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A16387T C16859T C19011T A23403G T24749C G25563T G29864A TG29867AA C29870H -29904AAAAAAAAAAAAAAA >MT345881 EPI_ISL_426135,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4404/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT345882 EPI_ISL_426136,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4406/2020,United States / Washington ATTAAAGGTT1- C36T C241T C1059T C3037T C4113T C14408T A23403G G25563T >MT345883 EPI_ISL_426137,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4407/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- C36T C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT345884 EPI_ISL_426071,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4424/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT345885 EPI_ISL_426072,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4427/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T T833C C1059T C3037T C14408T G18762T A23403G G25563T C27964T G29862A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT345886 EPI_ISL_426073,2020-03-27,SARS-CoV-2/human/USA/ID-UW-4433/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAA1- A31T C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C28093T C29520T G29864A TG29867AA C29870A >MT345887 EPI_ISL_426074,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4448/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCA1- C36T C241T T400C T833C C1059T C3037T C5934T C14408T C21575T A23403G G25563T C27964T AAAAA29899- >MT345888 EPI_ISL_426075,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4461/2020,United States / Idaho ATTAAAGGTTTATACCTTCCC1- A31T C36T C241T C3037T C14408T A20268G A23403G TG29867AA C29870A >MT350236 EPI_ISL_426454,2020-03-23,SARS-CoV-2/human/USA/VA-DCLS-0041/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T G4523A C10712T C14408T C16111T A23403G G25563T C29870A >MT350237 EPI_ISL_426455,2020-03-27,SARS-CoV-2/human/USA/VA-DCLS-0047/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T C14925T A23403G G25563T C29870A >MT350238 EPI_ISL_426456,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0048/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT350239 EPI_ISL_426457,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0049/2020,United States/Virginia ATTAAAG1------T T25Y C241T A652T C1059T C3037T C14408T C20371A A23403G G25563T C27688T >MT350240 EPI_ISL_426458,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0050/2020,United States/Virginia ATTA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT350241 EPI_ISL_426459,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0051/2020,United States/Virginia ATTA1- C6027T A10236G G11083T C14805T T17247C T23599C G26144T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT350242 EPI_ISL_426460,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0052/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C29870A >MT350243 EPI_ISL_426461,2020-03-27,SARS-CoV-2/human/USA/VA-DCLS-0053/2020,United States/Virginia ATTAAA1- C241T T1918C C3037T C14408T C18877T A23403G G25563T G28300T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT350244 EPI_ISL_426462,2020-03-29,SARS-CoV-2/human/USA/VA-DCLS-0054/2020,United States/Virginia C241T T1918C C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT350245 EPI_ISL_426463,2020-03-29,SARS-CoV-2/human/USA/VA-DCLS-0055/2020,United States/Virginia ATTAAA1- A38R C241T C1059T C3037T C14408T A23403G G25563T >MT350246 EPI_ISL_426464,2020-04-01,SARS-CoV-2/human/USA/VA-DCLS-0056/2020,United States/Virginia ATTAAA1- C6027T A10236G G11083T C14805T T17247C T23599C G26144T C26351T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT350247 EPI_ISL_426465,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0057/2020,United States/Virginia ATTAAAGGTTTATACCTTCC1- C241T C2416T C3037T C3923T G4523A C10712T C14408T A23403G G25563T >MT350248 EPI_ISL_426466,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0058/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T A652T C1059T C3037T C14408T A23403G G25563T C27688T G29868A C29870A >MT350249 EPI_ISL_426467,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0059/2020,United States/Virginia ATTAAAGGTTTA1- C241T A652T C1059T C3037T C14408T A23403G G25563T C27688T C29870A >MT350250 EPI_ISL_426468,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0060/2020,United States/Virginia ATT1- C241T T1918C C3037T C14408T C18877T A23403G G25563T ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29869- >MT350251 EPI_ISL_426469,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0061/2020,United States/Virginia ATTAAAGGTTTATACC1- C241T C1059T C3037T C14408T T19355Y A23403G G25563T C29870A >MT350252 EPI_ISL_426470,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0063/2020,United States/Virginia ATTAAAGGT1- T11Y C241T C1059T C3037T C14408T A23403G G24755T G25563T >MT350253 EPI_ISL_426471,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0064/2020,United States/Virginia ATTA1- C241T C1059T C3037T C14408T A23403G G24755T G25563T >MT350254 EPI_ISL_426472,2020-04-03,SARS-CoV-2/human/USA/VA-DCLS-0065/2020,United States/Virginia A1- C241T C313T C3037T C7815T C14408T C18555T A23403G GGG28881AAC C29614T >MT350255 EPI_ISL_426473,2020-04-03,SARS-CoV-2/human/USA/VA-DCLS-0066/2020,United States/Virginia ATTA1- C241T C313T C3037T C7815T C14408T A23403G GGG28881AAC C29614T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT350256 EPI_ISL_426474,2020-04-03,SARS-CoV-2/human/USA/VA-DCLS-0067/2020,United States/Virginia ATTAAAGGTTTATACCTTCCCA1- C241T C313T C3037T C7815T C14408T A23403G GGG28881AAC C29614T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT350257 EPI_ISL_426475,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0068/2020,United States/Virginia ATTAAA1- G8R C241T C2416T C3037T C10626T C10712T C14408T A23403G G25563T C28887T C29733T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT350263 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0480/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350264 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0428/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350265 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0427/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350266 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0434/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350267 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0442/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350268 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0418/2020,United States / WA C3784T C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350269 ,2020-03-20,SARS-CoV-2/human/USA/USA-WA_0797/2020,United States / WA C8782T T11320C C17747T A17858G C18060T C27416T T28144C C28657T AAAAAAAAAAAAAAAAAAAAA29883- >MT350270 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0432/2020,United States / WA C8782T C17747T A17858G C18060T G23120T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350271 ,2020-03-20,SARS-CoV-2/human/USA/USA-WA_0457/2020,United States / WA C8782T T11320C C17747T A17858G C18060T G27604A T28144C C28826T AAAAAAAAAAAAAAAAAAAAA29883- >MT350272 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0448/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350273 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0478/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350274 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0422/2020,United States / WA C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350275 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0484/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C C28873T AAAAAAAAAAAAAAAAAAAAA29883- >MT350276 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0429/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350277 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0441/2020,United States / WA C8782T T11320C G17302T C17747T A17858G T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350278 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0440/2020,United States / WA C8782T T11320C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350279 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0711/2020,United States / WA C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350280 ,2020-03-19,SARS-CoV-2/human/USA/USA-WA_0447/2020,United States / WA C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT350282 EPI_ISL_450506,2020-03-18,SARS-CoV-2/human/BRA/SP02cc/2020,Brazil C2388T G11083T C14805T T17247C T21784A G26144T >MT358401 ,2020-04-06,SARS-CoV-2/human/USA/LA096/2020,United States / New Orleans / LA ATTAAAGG1- C241T C1059T G2528A C3037T C10319T C11674T C14408T G18281T A23403G G25563T C27964T >MT358402 ,2020-04-06,SARS-CoV-2/human/USA/LA097/2020,United States / New Orleans / LA ATTAAAG1- C241T G598T C1059T C3037T C9443T T11121C C14408T A23403G G25563T C27964T >MT358637 EPI_ISL_426414,2020-04-05,SARS-CoV-2/human/IND/GBRC1/2020,India / Gujarat C241T C3037T A6466G C14408T A22374G A23403G G28396A C29451T >MT358638 MT539726 EPI_ISL_447608,2020-02,SARS-CoV-2/human/DEU/FFM1/2020,Germany G3518T G12704T G12797A A17423G T27272C C28854T >MT358639 EPI_ISL_447609,2020-02,SARS-CoV-2/human/DEU/FFM3/2020,Germany C241T C3037T C14408T A23403G GGG28881AAC >MT358640 EPI_ISL_447610,2020-02,SARS-CoV-2/human/DEU/FFM4/2020,Germany C241T C3037T A6228G C14408T C16289Y A23403G GGG28881AAC C28961T C29870M >MT358641 EPI_ISL_447611,2020-02,SARS-CoV-2/human/DEU/FFM5/2020,Germany G1440A G2891A A23235G >MT358642 EPI_ISL_447612,2020-02,SARS-CoV-2/human/DEU/FFM6/2020,Germany C241T C3037T A6228G C14408T A23403G GGG28881AAC C29870M >MT358643 EPI_ISL_447613,2020-02,SARS-CoV-2/human/DEU/FFM7/2020,Germany C241T C3037T C14408T C15324T C23179Y A23403G >MT358644 EPI_ISL_427245,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4180/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- A31T AAC34TTT C241T C1059T C3037T C12102T C14408T A23403G G25563T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT358645 EPI_ISL_427246,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4188/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C14408T C17118T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358646 EPI_ISL_427247,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4197/2020,United States / Washington AT1- C36T C241T C1059T C3037T C14408T A23403G G25563T C27804T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358647 EPI_ISL_427248,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4213/2020,United States / Washington AT1- AAC34TTT C241T C1059T C3037T C6040T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT358648 EPI_ISL_427249,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4217/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C8782T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358649 EPI_ISL_427250,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4227/2020,United States / Washington A1- T13C ACC35TTH C241T C1059T C3037T C14408T C19263T A23403G G25563T C29445T >MT358650 EPI_ISL_427251,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4228/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- AAC34TTT C241T C313T C3037T C3096T C14408T A23403G T24364C C25904T GGG28881AAC CAGTG29762- AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358651 EPI_ISL_427162,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4238/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACA1- C36T C241T C1059T C3037T C6361T C10632T C14408T C16260T A23403G G25563T C28821A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT358652 EPI_ISL_427169,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4239/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT358653 EPI_ISL_427163,2020-03-31,SARS-CoV-2/human/USA/CT-UW-4244/2020,United States / Connecticut ATTAAAGGTTTATACCT1- A31W AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T G28089T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358654 EPI_ISL_427164,2020-03-31,SARS-CoV-2/human/USA/CT-UW-4251/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T A10479G C14408T A21137G A23403G G25563T G28191T C29296T AAAA29900- >MT358655 EPI_ISL_427170,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4266/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGG1- AC35WT C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT358656 EPI_ISL_427252,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4281/2020,United States / Washington ATTAAAGGT1- A1262G G8602A C8782T C17747T A17858G C18060T G21800T C25418A G26152A G27090A T28144C C29838T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358657 EPI_ISL_427253,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4289/2020,United States / Washington A1G A4D AAC34HWT C241T C1059T C3037T C12880T C14408T C20233T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358658 EPI_ISL_427254,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4290/2020,United States / Washington ATTAAAGGTTT1- C36T C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358659 EPI_ISL_427255,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4291/2020,United States / Washington ATTAAAGGTTTATACCTTCCCA1- A31T AAC34TTT C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT358660 EPI_ISL_427256,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4292/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- AAC34TTT C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT358661 EPI_ISL_427173,2020-03-31,SARS-CoV-2/human/USA/OR-UW-4300/2020,United States / Oregon ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T C1059T C3037T C14408T A23403G G25563T G29862A G29864A TG29867AA C29870A >MT358662 EPI_ISL_427257,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4315/2020,United States / Washington ATTAAAGGTT1- A31T AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358663 EPI_ISL_427258,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4316/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T GGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29861- >MT358664 EPI_ISL_427259,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4318/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C6504T C10207T C14408T A23403G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358665 EPI_ISL_427260,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4321/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T A34W C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT358666 EPI_ISL_427261,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4322/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358667 EPI_ISL_427262,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4324/2020,United States / Washington ATTAAAG1- A31T AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT358668 EPI_ISL_427263,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4326/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAA29896- >MT358669 EPI_ISL_427264,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4329/2020,United States / Washington A1- A31T AAC34TTT C241T TAAAGTCAT684- C3037T C6636T C14408T C18877T C21575T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT358670 EPI_ISL_427265,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4330/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- G8602A C8782T C17747T A17858G C18060T T23482C C25418A G26152A T28144C A29903- >MT358671 EPI_ISL_427266,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4335/2020,United States / Washington ATTAAAGG1- AAC34TTT G2840A G5572T C8782T C17747T A17858G C18060T A26045G T27838A T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358672 EPI_ISL_427268,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4340/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AAC34WWT C241T C1059T C3037T T5165C C6040T T6779A C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358673 EPI_ISL_427165,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4341/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C6026T C14225B C14408T C19554T A23403G G25563T T27098G C28836T >MT358674 EPI_ISL_427174,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3809/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C3832T G8602A C8782T C17747T A17858G C18060T G26152A T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358675 EPI_ISL_427175,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3810/2020,United States / Washington AT1- C8782T C17747T A17858G C18060T T28144C AAAA29900- >MT358676 EPI_ISL_427176,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3812/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358677 EPI_ISL_427177,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3814/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C1929T C5784T C8782T C17747T A17858G C18060T C23525T G26730A T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358678 EPI_ISL_427178,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3815/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C8782T A11742T C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358679 EPI_ISL_427179,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3816/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1------------------------------TTT C36T C8782T T11320C C17747T A17858G C18060T T28144C C28826T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358680 EPI_ISL_427180,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3819/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358681 EPI_ISL_427181,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3826/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C2397T C3037T C14408T A23403G G25563T C27630T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358682 EPI_ISL_427182,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3827/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C8782T C17747T A17858G C18060T G21255C C21575T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358683 EPI_ISL_427183,2020-03-25,SARS-CoV-2/human/USA/WA-UW-3828/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1------------------------------TTT C36T C241T C1059T C3037T C4423T C14408T A23403G G25563T T28930C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358684 EPI_ISL_427184,2020-03-25,SARS-CoV-2/human/USA/WA-UW-3829/2020,United States / Washington ATT1-AB C36T C241T C1059T C3037T C7765T G10846T C14408T C19488T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT358685 EPI_ISL_427185,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3832/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C3141A C14408T C17766T A23403G G25563T C26625T C29870A A29903- >MT358686 EPI_ISL_427186,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3833/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C17747T A17858G C18060T T28144C TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT358687 EPI_ISL_427187,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3834/2020,United States / Washington ATTAAA1- A31T C36T C3992T C8782T C17747T A17858G C18060T G22984A A23992T T27384C T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358688 EPI_ISL_427188,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3838/2020,United States / Washington ATTAAAGGTTTAT1- C241T C1059T C3037T A11830G C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358689 EPI_ISL_427189,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3839/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T A23147G A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358690 EPI_ISL_427190,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3841/2020,United States / Washington ATTAAAGGTT1- C36T T490A A1399G C3177T C6040T C8782T G12478A T18736C C24034T C25803T T26729C G28077C T28144C C28896G G28985T A29012G A29700G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358691 EPI_ISL_427191,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3843/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358692 EPI_ISL_427192,2020-03-25,SARS-CoV-2/human/USA/WA-UW-3844/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C36T C241T C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358693 EPI_ISL_427161,2020-03-25,SARS-CoV-2/human/USA/CT-UW-3845/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T T6691C C7843T G7936T G11083T A13768G C14805T A15869T T17247C C17639T G26144T T28693C C28915T TG29867AA C29870A >MT358694 EPI_ISL_427193,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3850/2020,United States / Washington ATTAAAGGTTTATACCTTCC1- C8782T C17747T A17858G C18060T T28144C C29870M >MT358695 EPI_ISL_427194,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3855/2020,United States / Washington ATTAAA1- A31W C36T C241T C1059T C3037T C6312T C14408T A23403G G25563T G29553A AAAAA29899- >MT358696 EPI_ISL_427195,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3858/2020,United States / Washington ATTAAA1- C36T C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358697 EPI_ISL_427196,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3862/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358698 EPI_ISL_427197,2020-03-25,SARS-CoV-2/human/USA/WA-UW-3868/2020,United States / Washington ATTAAAGGTT1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT358699 EPI_ISL_427198,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3871/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C6040T C14408T A23403G G25563T T26756A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358700 EPI_ISL_427199,2020-03-26,SARS-CoV-2/human/USA/WA-UW-3880/2020,United States / Washington ATTAAAGGTTTAT1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358701 EPI_ISL_427200,2020-03-25,SARS-CoV-2/human/USA/WA-UW-3881/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T C1059T C3037T C14408T A23403G G25563T C28472T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358702 EPI_ISL_427201,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3883/2020,United States / Washington ATTAAAGGTTTATA1- C241T C1059T C3037T C14408T A23403G G25563T >MT358703 EPI_ISL_427166,2020-03-25,SARS-CoV-2/human/USA/ID-UW-3888/2020,United States / Idaho ATTAAAGGT1- C36T C241T C1059T C3037T C11224T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358704 EPI_ISL_427171,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4462/2020,United States / Idaho AT1- A31T C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T T27995G C27998A GTG28001TAA C28146A T28148A TT28150CC A28154C A28159G TG29867AA C29870A >MT358705 EPI_ISL_427172,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4486/2020,United States / Idaho A1G A4D C36T C241T C1059T C3037T C14408T A16947G A23403G G25563T -29904AAAAAAA >MT358706 EPI_ISL_427269,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4499/2020,United States / Washington AT1GA A4T C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT358707 EPI_ISL_427270,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4500/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358708 EPI_ISL_427202,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3889/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTA1- C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358709 EPI_ISL_427167,2020-03-26,SARS-CoV-2/human/USA/ID-UW-3892/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AAC34TTT A4236G G11083T C14805T T25655C G26144T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358710 EPI_ISL_427203,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3895/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T C8782T C17747T A17858G C18060T T28144C AAAA29900- >MT358711 EPI_ISL_427204,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3900/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- A31T C36T C5784T C8782T G16957T C17747T A17858G C18060T G26730A T28144C ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29869- >MT358712 EPI_ISL_427205,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3903/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358713 EPI_ISL_427206,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3908/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- A6693G C8782T C17747T A17858G C18060T C25339T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358714 EPI_ISL_427207,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3911/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT358715 EPI_ISL_427209,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3918/2020,United States / Washington AT1- C241T C1059T C3037T C12880T C14408T G17049A A23403G G25563T G29553A >MT358716 EPI_ISL_427210,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3923/2020,United States / Washington AT1-C C36T C241T C1059T C3037T C6548T A11595G C14408T A23403G G24348T G25563T G29553A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT358717 EPI_ISL_427211,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3932/2020,United States / Washington ATTAAAGGTTTATA1- C36T C241T C1059T C3037T C6040T C14408T A23403G G25563T GTT26155- AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358718 EPI_ISL_427212,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3935/2020,United States / Washington A1G C36T C241T C379A C1059T T2244C C3037T A10761G C14408T A23403G C23865T G25563T G29862A G29864A TG29867AA C29870A >MT358719 EPI_ISL_427213,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3939/2020,United States / Washington ATTAAAG1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT358720 EPI_ISL_427214,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3940/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- TGTTATGGT514- C8782T G15193T C17747T A17858G C18060T T28144C T29410C TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT358721 EPI_ISL_427215,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3941/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T C1059T C3037T G11083T C14408T A23403G G25563T G29553A G29862A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT358722 EPI_ISL_427216,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3942/2020,United States / Washington ATTAAAGGTTTATACCTTC1- C241T C1059T C3037T C14408T A23403G G25563T G29553A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT358723 EPI_ISL_427217,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3946/2020,United States / Washington ATTAA1- C36T C241T C1059T C3037T C14408T A23403G C25096T G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT358724 EPI_ISL_427218,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3950/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TWT G354A G6419A C8782T C17747T A17858G C18060T C25521T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358725 EPI_ISL_427219,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3954/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T A9698G T9976C C12880T C14408T T19203C A19963C A23403G G25563T C26768T G29431T G29553A TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT358726 EPI_ISL_427220,2020-03-27,SARS-CoV-2/human/USA/WA-UW-3959/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTT1- C8782T C17747T A17858G C18060T G22988A C24700T T28144C A29903- >MT358727 EPI_ISL_427221,2020-03-30,SARS-CoV-2/human/USA/WA-UW-3963/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT358728 EPI_ISL_427222,2020-03-31,SARS-CoV-2/human/USA/WA-UW-3964/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- C36T C241T C1059T C3037T C7728A C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT358729 EPI_ISL_427223,2020-03-31,SARS-CoV-2/human/USA/WA-UW-3969/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT358730 EPI_ISL_427224,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3983/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T T8883C TT8885AA C14408T T21146A G21151T A23403G G25563T G29553A AAAA29900- >MT358731 EPI_ISL_427225,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3984/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCA1- C241T C1059T C2156T C3037T C14408T T21146D A23403G G25563T C28093T -29904AAAA -29905AHAG >MT358732 EPI_ISL_427226,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3985/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT358733 EPI_ISL_427227,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3986/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T C27625T AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT358734 EPI_ISL_427228,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3988/2020,United States / Washington TTA2AGT C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904AAAAAAAAAAAAAAAA >MT358735 EPI_ISL_427229,2020-03-28,SARS-CoV-2/human/USA/WA-UW-3989/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA A39T C241T C3037T C14408T C18877T A23403G G25563T G27604A G29864A >MT358736 EPI_ISL_427230,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3990/2020,United States / Washington A1G T10A T13A C241T C1059T C3037T C14408T T21146A A23403G C24904T G25563T G29553A AA29902- >MT358737 EPI_ISL_427232,2020-03-28,SARS-CoV-2/human/USA/WA-UW-3994/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C36Y C241T C1059T C3037T C10582T C14408T C15752T A23403G G25563T A29292G AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT358738 EPI_ISL_427233,2020-03-28,SARS-CoV-2/human/USA/WA-UW-3996/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAA29892- >MT358739 EPI_ISL_427234,2020-03-29,SARS-CoV-2/human/USA/WA-UW-3997/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTH C241T C1059T C3037T T8883C TT8885AA AGG13512TTA C14408T T21146A G21151T A23403G G25563T G29553A >MT358740 EPI_ISL_427235,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4035/2020,United States / Washington ATTAAAGGT1-------AC AT12TA C15T C241T C1059T C3037T C6040T C14408T A23403G G25563T A29903- >MT358741 EPI_ISL_427236,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4038/2020,United States / Washington ATTAAAGGTTTATA1- C241T C1059T C3037T C12880T C14408T T21146A A23403G G25563T G29553A AAAAAAAAAAAAAA29890- >MT358742 EPI_ISL_427237,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4039/2020,United States / Washington ATTAAAGGTTTATA1- G2840A G5572T C8782T C17747T A17858G C18060T A26045G T28144C A29903- >MT358743 EPI_ISL_427238,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4068/2020,United States / Washington ATTAAAGGTTTATACCTTC1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAA29897- >MT358744 EPI_ISL_427239,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4082/2020,United States / Washington ATTAAAGG1------AV C241T C1059T C3037T C6312T T13932C C14408T T21146A G21151T A23403G G25563T G29553A >MT358745 EPI_ISL_427168,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4100/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T T833C C1059T G1580T G2951T C3037T G12758A C14408T T21146D C21736T G22436T C22439G CC22444AT A23403G G24161A GTG24584ACA G25563T T27384C C27964T AAAAAAAAAA29894- >MT358746 EPI_ISL_427240,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4105/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCT1- C241T C1059T TT1333AA C3037T AGG13512TTA C14408T A23403G G25563T A29903G >MT358747 EPI_ISL_427241,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4109/2020,United States / Washington ATTAAAGGTTTATACC1- AAC34TTT C241T C1059T C3037T C4084T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAA29888- >MT358748 EPI_ISL_427242,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4111/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- AAC34TTT C241T C1059T C3037T C14408T T21146A A23403G G25563T >MT359865 EPI_ISL_418860,2020-03-15,SARS-CoV-2/human/ESP/VH000001133/2020,Spain / Barcelona ATTAAAGGTTTAT1- C241T C3037T C14408T A20268G A23403G >MT359866 EPI_ISL_418861,2020-03-24,SARS-CoV-2/human/ESP/VH198152683/2020,Spain / Barcelona ATTAAAGGTT1- C241T C313T C3037T C14408T A23403G A27302G GGG28881AAC >MT365025 ,2020-03-18,SARS-CoV-2/human/USA/USA-KY-9A06/2020,United States / KY C241T C379A C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAA29882- >MT365026 ,2020-03-18,SARS-CoV-2/human/USA/USA-KY-9A10/2020,United States / KY C8782T T15411C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAA29889- >MT365027 ,2020-03-18,SARS-CoV-2/human/USA/USA-KY-9E09/2020,United States / KY T3172C C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAA29889- >MT365028 EPI_ISL_450408,2020-01-24,SARS-CoV-2/human/HKG/HKU-905a/2020,China / Hong Kong G1397A G11083T T28688C G29742T AAAAAAAAAAAA29892- >MT365029 EPI_ISL_450409,2020-01-30,SARS-CoV-2/human/HKG/HKU-911a/2020,China / Hong Kong C9967T AAAAAAAAAAAA29892- >MT365030 EPI_ISL_450410,2020-01-31,SARS-CoV-2/human/HKG/HKU-913a/2020,China / Hong Kong A17423G A20667G C28854T AAAAAAAAAAAA29892- >MT365031 EPI_ISL_450411,2020-02-02,SARS-CoV-2/human/HKG/HKU-915a/2020,China / Hong Kong A17423G C28854T AAAAAAAAAAAA29892- >MT365032 EPI_ISL_450412,2020-01-30,SARS-CoV-2/human/HKG/HKU-904a/2020,China / Hong Kong ATTA1- C4158T C8782T C18828T T28144C AAAAAAAAAAAA29892- >MT370516 EPI_ISL_415741,2020-02-26,SARS-CoV-2/human/TWN/CGMH-CGU-03/2020,China / Taiwan / Taoyuan AT1- C1059T G1397A G11083T C23934T T28648C T28688C G29742T A29903- >MT370517 EPI_ISL_415742,2020-02-27,SARS-CoV-2/human/TWN/CGMH-CGU-04/2020,China / Taiwan / Taoyuan ATT1- C1059T G1397A A5053G C11074T G11083T G21319A C23934T T28648C T28688C G29742T AAAAAAAAAAAAAAAAAA29886- >MT370518 EPI_ISL_415743,2020-02-27,SARS-CoV-2/human/TWN/CGMH-CGU-05/2020,China / Taiwan / Taoyuan C1059T G1397A G11083T C23934T T28648C T28688C G29742T >MT370831 EPI_ISL_421410,2020-03-18,SARS-CoV-2/human/USA/NY-PV08464/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T A11101G C11916T C14408T C18998T G21830T G22468T A23403G G25563T G29540A GAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29781- >MT370832 EPI_ISL_421361,2020-03-17,SARS-CoV-2/human/USA/NY-PV08139/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C3037T C14408T C18877T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370833 EPI_ISL_421388,2020-03-18,SARS-CoV-2/human/USA/NY-PV08432/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10015T C11916T C14408T C18744T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370834 EPI_ISL_421420,2020-03-18,SARS-CoV-2/human/USA/NY-PV08478/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T C28836T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370835 EPI_ISL_421384,2020-03-18,SARS-CoV-2/human/USA/NY-PV08426/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T A23403G AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370836 EPI_ISL_421391,2020-03-18,SARS-CoV-2/human/USA/NY-PV08436/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T G28077T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370837 EPI_ISL_421423,2020-03-18,SARS-CoV-2/human/USA/NY-PV08486/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370838 EPI_ISL_421405,2020-03-17,SARS-CoV-2/human/USA/NY-PV08456/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C4456T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370839 EPI_ISL_421353,2020-03-14,SARS-CoV-2/human/USA/NY-PV08124/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T G10265A C14408T A23403G GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370840 EPI_ISL_421362,2020-03-17,SARS-CoV-2/human/USA/NY-PV08140/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C2091T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370841 EPI_ISL_421426,2020-03-17,SARS-CoV-2/human/USA/NY-PV08490/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- T490A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370842 EPI_ISL_415151,2020-03-04,SARS-CoV-2/human/USA/NY2-PV08100/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T GAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29781- >MT370843 EPI_ISL_421350,2020-03-17,SARS-CoV-2/human/USA/NY-PV08121/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C1059T C3037T C14408T A23403G G25563T C25688A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370844 EPI_ISL_421409,2020-03-18,SARS-CoV-2/human/USA/NY-PV08463/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T A2165G C3037T C4810T C14408T A23403G G25563T G29711T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370845 EPI_ISL_421428,2020-03-18,SARS-CoV-2/human/USA/NY-PV08492/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370846 EPI_ISL_421369,2020-03-16,SARS-CoV-2/human/USA/NY-PV08401/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T T14104C C14408T C18877T A23403G G25563T GCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29783- >MT370847 EPI_ISL_421392,2020-03-18,SARS-CoV-2/human/USA/NY-PV08438/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T T4035C C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370848 EPI_ISL_421393,2020-03-18,SARS-CoV-2/human/USA/NY-PV08441/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- TCTTAATGACAACCT1600- C8782T G12274A C13115T T25541C C26088T T28144C AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370849 EPI_ISL_421364,2020-03-17,SARS-CoV-2/human/USA/NY-PV08146/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C8782T C17747T A17858G C18060T T28144C C28708T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370850 EPI_ISL_421434,2020-03-17,SARS-CoV-2/human/USA/NY-PV08500/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T C28472T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370851 EPI_ISL_421435,2020-03-18,SARS-CoV-2/human/USA/NY-PV09000/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C11003T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370852 EPI_ISL_421359,2020-03-17,SARS-CoV-2/human/USA/NY-PV08137/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- G11083T C14805T C18086T A21137G G26144T G28842T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370853 EPI_ISL_421430,2020-03-17,SARS-CoV-2/human/USA/NY-PV08494/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370854 EPI_ISL_421355,2020-03-14,SARS-CoV-2/human/USA/NY-PV08127/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370855 EPI_ISL_421382,2020-03-19,SARS-CoV-2/human/USA/NY-PV08420/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T G2632T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370856 EPI_ISL_421396,2020-03-18,SARS-CoV-2/human/USA/NY-PV08445/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T T28061C AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370857 EPI_ISL_421365,2020-03-14,SARS-CoV-2/human/USA/NY-PV08148/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C2676T C8782T A22606T C23525T T28144C G28878A G29742A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370858 EPI_ISL_421412,2020-03-18,SARS-CoV-2/human/USA/NY-PV08468/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T C28849T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370859 EPI_ISL_421371,2020-03-17,SARS-CoV-2/human/USA/NY-PV08403/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T A7770G C14408T A20755C A22455G A23403G G25563T TGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29785- >MT370860 EPI_ISL_421389,2020-03-18,SARS-CoV-2/human/USA/NY-PV08434/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10015T C11916T C14408T C18744T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370861 EPI_ISL_421348,2020-03-17,SARS-CoV-2/human/USA/NY-PV08109/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T G1820A C3037T C10851T C14408T A23403G G25563T CCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29835- >MT370862 EPI_ISL_421375,2020-03-16,SARS-CoV-2/human/USA/NY-PV08412/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T A6324G T11191A C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370863 EPI_ISL_421414,2020-03-18,SARS-CoV-2/human/USA/NY-PV08471/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C619T C1059T C3037T C14408T A14912G C20844T A23403G G25563T T28199C AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370864 EPI_ISL_421431,2020-03-18,SARS-CoV-2/human/USA/NY-PV08495/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C5140T C14408T A23403G G25644T GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370865 EPI_ISL_421403,2020-03-17,SARS-CoV-2/human/USA/NY-PV08453/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370866 EPI_ISL_421357,2020-03-17,SARS-CoV-2/human/USA/NY-PV08135/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- G11083T C14805T C18086T A21137G G26144T G28842T GTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29828- >MT370867 EPI_ISL_421368,2020-03-15,SARS-CoV-2/human/USA/NY-PV08400/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T TGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29785- >MT370868 EPI_ISL_421422,2020-03-17,SARS-CoV-2/human/USA/NY-PV08485/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10015T C11916T C14408T C18744T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370869 EPI_ISL_421408,2020-03-18,SARS-CoV-2/human/USA/NY-PV08462/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T G11083T C14408T C16293T A23403G A25575C AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370870 EPI_ISL_421413,2020-03-18,SARS-CoV-2/human/USA/NY-PV08469/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370871 EPI_ISL_421397,2020-03-17,SARS-CoV-2/human/USA/NY-PV08446/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- G199T C241T C1059T C3037T A7291G C11916T C12153T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370872 EPI_ISL_421427,2020-03-17,SARS-CoV-2/human/USA/NY-PV08491/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370873 EPI_ISL_421372,2020-03-16,SARS-CoV-2/human/USA/NY-PV08404/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370874 EPI_ISL_421366,2020-03-15,SARS-CoV-2/human/USA/NY-PV08149/2020,United States / New York / Westchester County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT370875 EPI_ISL_421416,2020-03-18,SARS-CoV-2/human/USA/NY-PV08473/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370876 EPI_ISL_421399,2020-03-17,SARS-CoV-2/human/USA/NY-PV08448/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T C29274T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370877 EPI_ISL_421417,2020-03-17,SARS-CoV-2/human/USA/NY-PV08474/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370878 EPI_ISL_421376,2020-03-16,SARS-CoV-2/human/USA/NY-PV08413/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370879 EPI_ISL_421373,2020-03-17,SARS-CoV-2/human/USA/NY-PV08405/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTG1- C241T C3037T C14408T C18877T A23403G G25563T CTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29788- >MT370880 EPI_ISL_421386,2020-03-19,SARS-CoV-2/human/USA/NY-PV08428/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10369T C14408T C15324T T23284C A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370881 EPI_ISL_421360,2020-03-13,SARS-CoV-2/human/USA/NY-PV08138/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A20755C A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370882 EPI_ISL_421421,2020-03-18,SARS-CoV-2/human/USA/NY-PV08481/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C4113T C11916T C14408T C18998T A23403G G25563T G29540A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370883 EPI_ISL_421383,2020-03-18,SARS-CoV-2/human/USA/NY-PV08425/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C3037T C14408T C18877T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370884 EPI_ISL_421380,2020-03-16,SARS-CoV-2/human/USA/NY-PV08417/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C10851T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370885 EPI_ISL_421407,2020-03-18,SARS-CoV-2/human/USA/NY-PV08461/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C619T C1059T C3037T C14408T A14912G A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370886 EPI_ISL_421401,2020-03-17,SARS-CoV-2/human/USA/NY-PV08450/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T C18877T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370887 EPI_ISL_421418,2020-03-18,SARS-CoV-2/human/USA/NY-PV08476/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370888 EPI_ISL_421433,2020-03-17,SARS-CoV-2/human/USA/NY-PV08498/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G11083T C14805T T17247C G26144T G29543C AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370889 EPI_ISL_421415,2020-03-13,SARS-CoV-2/human/USA/NY-PV08472/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G A24520G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370890 EPI_ISL_421419,2020-03-18,SARS-CoV-2/human/USA/NY-PV08477/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T G2632T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370891 EPI_ISL_421370,2020-03-16,SARS-CoV-2/human/USA/NY-PV08402/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT370892 EPI_ISL_421351,2020-03-11,SARS-CoV-2/human/USA/NY-PV08122/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T G10265A C14408T A23403G GGG28881AAC AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370893 EPI_ISL_421381,2020-03-17,SARS-CoV-2/human/USA/NY-PV08419/2020,United States / New York / Bronx ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370894 EPI_ISL_421432,2020-03-17,SARS-CoV-2/human/USA/NY-PV08496/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10277T C14408T A23403G G25563T C26625T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370895 EPI_ISL_421378,2020-03-16,SARS-CoV-2/human/USA/NY-PV08415/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1917T C3037T C14408T G20005A A23403G G25563T TGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29807- >MT370896 EPI_ISL_421406,2020-03-18,SARS-CoV-2/human/USA/NY-PV08459/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370897 EPI_ISL_421402,2020-03-18,SARS-CoV-2/human/USA/NY-PV08452/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370898 EPI_ISL_421424,2020-03-18,SARS-CoV-2/human/USA/NY-PV08487/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370899 EPI_ISL_421404,2020-03-17,SARS-CoV-2/human/USA/NY-PV08455/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370900 EPI_ISL_421374,2020-03-16,SARS-CoV-2/human/USA/NY-PV08410/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370901 EPI_ISL_421395,2020-03-17,SARS-CoV-2/human/USA/NY-PV08444/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370902 EPI_ISL_421400,2020-03-17,SARS-CoV-2/human/USA/NY-PV08449/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C10851T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370903 EPI_ISL_421358,2020-03-17,SARS-CoV-2/human/USA/NY-PV08136/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- G11083T C14805T C18086T G26144T G28842T AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT370904 EPI_ISL_414476,2020-02-29,SARS-CoV-2/human/USA/NY1-PV08001/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- G1397A G3242A A9514G G11083T C25214T T28688C G29027T G29742T GAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29781- >MT370905 EPI_ISL_421367,2020-03-17,SARS-CoV-2/human/USA/NY-PV08150/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T TGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29785- >MT370906 EPI_ISL_421349,2020-03-17,SARS-CoV-2/human/USA/NY-PV08120/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T C25688A GTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29828- >MT370907 EPI_ISL_421379,2020-03-17,SARS-CoV-2/human/USA/NY-PV08416/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T TGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29785- >MT370908 EPI_ISL_421390,2020-03-18,SARS-CoV-2/human/USA/NY-PV08435/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C2416T C3037T C3168T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370909 EPI_ISL_421425,2020-03-17,SARS-CoV-2/human/USA/NY-PV08489/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- G11083T C14805T T17247C G26144T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370910 EPI_ISL_421356,2020-03-13,SARS-CoV-2/human/USA/NY-PV08133/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A20755C A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370911 EPI_ISL_421429,2020-03-17,SARS-CoV-2/human/USA/NY-PV08493/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370912 EPI_ISL_421385,2020-03-19,SARS-CoV-2/human/USA/NY-PV08427/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370913 EPI_ISL_421363,2020-03-17,SARS-CoV-2/human/USA/NY-PV08143/2020,United States / New York / Westchester County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T T3144C C14408T C16260T A23403G G25563T C28821A AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370914 EPI_ISL_421398,2020-03-17,SARS-CoV-2/human/USA/NY-PV08447/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370915 EPI_ISL_421354,2020-03-13,SARS-CoV-2/human/USA/NY-PV08125/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T A2018G C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370916 EPI_ISL_421394,2020-03-17,SARS-CoV-2/human/USA/NY-PV08443/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C241T C1059T C3037T C14408T A23403G G25563T C28849T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370917 EPI_ISL_421387,2020-03-19,SARS-CoV-2/human/USA/NY-PV08429/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C619T C1059T C3037T C14408T A14912G A23403G G25563T CAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29769- >MT370918 EPI_ISL_421377,2020-03-16,SARS-CoV-2/human/USA/NY-PV08414/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- G11083T C11950T C14805T T17247C G26144T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370919 EPI_ISL_421352,2020-03-14,SARS-CoV-2/human/USA/NY-PV08123/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T G10265A C14408T A23403G GGG28881AAC GTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29828- >MT370920 EPI_ISL_421411,2020-03-18,SARS-CoV-2/human/USA/NY-PV08466/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370921 EPI_ISL_422514,2020-03-20,SARS-CoV-2/human/USA/NY-PV09143/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A20755C A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370922 EPI_ISL_422522,2020-03-22,SARS-CoV-2/human/USA/NY-PV09154/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- A2745T G11083T C14805T T17247C G26144T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370923 EPI_ISL_421594,2020-03-21,SARS-CoV-2/human/USA/NY-PV09019/2020,United States / New York / Staten Island ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T G23126T A23403G G25563T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT370924 EPI_ISL_422559,2020-03-22,SARS-CoV-2/human/USA/NY-PV09305/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C241T C1059T C3037T C14408T A23403G G25563T AGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29763- >MT370925 EPI_ISL_422516,2020-03-20,SARS-CoV-2/human/USA/NY-PV09145/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C183T C241T C1059T C3037T C7728T C14408T A23403G G25563T AGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29776- >MT370926 EPI_ISL_421627,2020-03-18,SARS-CoV-2/human/USA/NY-PV09087/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T GAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29766- >MT370927 EPI_ISL_421635,2020-03-21,SARS-CoV-2/human/USA/NY-PV09103/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C1917T C3037T C14408T G20005A A23403G G25563T CAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29769- >MT370928 EPI_ISL_422496,2020-03-19,SARS-CoV-2/human/USA/NY-PV09121/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370929 EPI_ISL_422545,2020-03-20,SARS-CoV-2/human/USA/NY-PV09188/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C8782T C17747T A17858G C18060T T28144C TACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29760- >MT370930 EPI_ISL_422521,2020-03-22,SARS-CoV-2/human/USA/NY-PV09153/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T C14408T A23403G G25563T GGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29778- >MT370931 EPI_ISL_422528,2020-03-21,SARS-CoV-2/human/USA/NY-PV09164/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A14747G A20755C A23403G G25563T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370932 EPI_ISL_422551,2020-03-20,SARS-CoV-2/human/USA/NY-PV09195/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C619T C1059T C3037T C14408T A14912G A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370933 EPI_ISL_421619,2020-03-20,SARS-CoV-2/human/USA/NJ-PV09072/2020,United States / New Jersey / Hudson County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370934 EPI_ISL_421624,2020-03-20,SARS-CoV-2/human/USA/NY-PV09079/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370935 EPI_ISL_421612,2020-03-20,SARS-CoV-2/human/USA/NY-PV09060/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370936 EPI_ISL_422512,2020-03-20,SARS-CoV-2/human/USA/NY-PV09141/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C4113T C11916T C14408T C18998T A23403G G25563T G29540A TGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29758- >MT370937 EPI_ISL_422513,2020-03-20,SARS-CoV-2/human/USA/NY-PV09142/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C2416T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370938 EPI_ISL_422556,2020-03-21,SARS-CoV-2/human/USA/NY-PV09301/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C3037T C14408T C18877T A23403G G25563T T29010C GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370939 EPI_ISL_422494,2020-03-19,SARS-CoV-2/human/USA/NY-PV09119/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370940 EPI_ISL_422541,2020-03-19,SARS-CoV-2/human/USA/NY-PV09182/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T T9172C A10948G C14408T A23403G G26730T GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370942 EPI_ISL_422502,2020-03-19,SARS-CoV-2/human/USA/NY-PV09128/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29770- >MT370943 EPI_ISL_422520,2020-03-21,SARS-CoV-2/human/USA/NY-PV09152/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T C18877T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370944 EPI_ISL_422495,2020-03-19,SARS-CoV-2/human/USA/NY-PV09120/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370945 EPI_ISL_422518,2020-03-22,SARS-CoV-2/human/USA/NY-PV09149/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C9561T C14408T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370946 EPI_ISL_421623,2020-03-20,SARS-CoV-2/human/USA/NY-PV09077/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T C20555T A23403G G25563T G28077T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370947 EPI_ISL_421604,2020-03-21,SARS-CoV-2/human/USA/NY-PV09039/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T C11916T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370948 EPI_ISL_422515,2020-03-20,SARS-CoV-2/human/USA/NY-PV09144/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T G29511T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370949 EPI_ISL_421621,2020-03-20,SARS-CoV-2/human/USA/NY-PV09075/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C3037T G10265A C14408T C15963T A23403G C26907T GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370950 EPI_ISL_422549,2020-03-20,SARS-CoV-2/human/USA/NY-PV09193/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370951 EPI_ISL_422535,2020-03-19,SARS-CoV-2/human/USA/NY-PV09176/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370952 EPI_ISL_421605,2020-03-20,SARS-CoV-2/human/USA/NY-PV09041/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370953 EPI_ISL_422497,2020-03-19,SARS-CoV-2/human/USA/NY-PV09122/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T A4544T C14408T A20268G A23403G C29743T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370954 EPI_ISL_422523,2020-03-21,SARS-CoV-2/human/USA/NY-PV09156/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C8782T T9477A T28144C GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370955 EPI_ISL_422493,2020-03-19,SARS-CoV-2/human/USA/NY-PV09118/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370956 EPI_ISL_422503,2020-03-19,SARS-CoV-2/human/USA/NY-PV09129/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C11916T C14408T C18998T A20553G A23403G G25563T T28151C G29540A TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370957 EPI_ISL_421633,2020-03-18,SARS-CoV-2/human/USA/NY-PV09099/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- G11083T C14805T T17247C G26144T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370958 EPI_ISL_422505,2020-03-19,SARS-CoV-2/human/USA/NY-PV09132/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C8078T C14408T G18973T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370959 EPI_ISL_422527,2020-03-21,SARS-CoV-2/human/USA/NY-PV09163/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370960 EPI_ISL_421631,2020-03-18,SARS-CoV-2/human/USA/NY-PV09097/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T T18519C C19220T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370961 EPI_ISL_422511,2020-03-20,SARS-CoV-2/human/USA/NY-PV09140/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T C28969A CAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29769- >MT370962 EPI_ISL_421611,2020-03-21,SARS-CoV-2/human/USA/NY-PV09056/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370963 EPI_ISL_422538,2020-03-19,SARS-CoV-2/human/USA/NY-PV09179/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTA1- C241T C1059T G2632T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370964 EPI_ISL_421602,2020-03-21,SARS-CoV-2/human/USA/NY-PV09032/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370965 EPI_ISL_422492,2020-03-19,SARS-CoV-2/human/USA/NY-PV09116/2020,United States / New York / Nassau County ATTAAAGGTTTA1- C241T C3037T C14408T A23403G GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370966 EPI_ISL_422539,2020-03-19,SARS-CoV-2/human/USA/NY-PV09180/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370967 EPI_ISL_422557,2020-03-21,SARS-CoV-2/human/USA/NY-PV09303/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T A14912G A23403G G25563T AATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29770- >MT370968 EPI_ISL_421615,2020-03-20,SARS-CoV-2/human/USA/NY-PV09064/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T G1820A C3037T C10851T C14408T A23403G G25563T C28737T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT370969 EPI_ISL_422554,2020-03-21,SARS-CoV-2/human/USA/NY-PV09199/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A ACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29768- >MT370970 EPI_ISL_422548,2020-03-20,SARS-CoV-2/human/USA/NY-PV09192/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T C25614T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370971 EPI_ISL_421613,2020-03-20,SARS-CoV-2/human/USA/NY-PV09061/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C1625T G11083T C14805T T17247C G26144T G28739T GGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29778- >MT370972 EPI_ISL_422509,2020-03-20,SARS-CoV-2/human/USA/NY-PV09138/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T G1697A C3037T C11916T C14408T A23403G G25563T GGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29778- >MT370973 EPI_ISL_421614,2020-03-20,SARS-CoV-2/human/USA/NY-PV09063/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C1625T G11083T C14805T T17247C A19166G G26144T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT370974 EPI_ISL_422560,2020-03-22,SARS-CoV-2/human/USA/NY-PV09307/2020,United States / New York ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C3037T C10335T C14408T C18877T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370975 EPI_ISL_422506,2020-03-19,SARS-CoV-2/human/USA/NY-PV09134/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1594T C3037T C14408T A23403G G25563T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370976 EPI_ISL_422490,2020-03-20,SARS-CoV-2/human/USA/NY-PV09069/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370977 EPI_ISL_421597,2020-03-21,SARS-CoV-2/human/USA/NY-PV09023/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C4113T C11916T C14408T C18998T A23403G G25563T G29540A AGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29776- >MT370978 EPI_ISL_422524,2020-03-22,SARS-CoV-2/human/USA/NY-PV09157/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T G21520T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370979 EPI_ISL_421607,2020-03-21,SARS-CoV-2/human/USA/NY-PV09044/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A19883G A23403G G25563T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT370980 EPI_ISL_421616,2020-03-20,SARS-CoV-2/human/USA/NY-PV09067/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C1625T G11083T C14805T T17247C A19166G G26144T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370981 EPI_ISL_422498,2020-03-19,SARS-CoV-2/human/USA/NY-PV09123/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370982 EPI_ISL_422532,2020-03-19,SARS-CoV-2/human/USA/NY-PV09170/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T C16428T A23403G G25563T G25879T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370983 EPI_ISL_421603,2020-03-21,SARS-CoV-2/human/USA/NY-PV09037/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C1917T C3037T C14408T A17615G A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370984 EPI_ISL_421606,2020-03-21,SARS-CoV-2/human/USA/NY-PV09043/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370985 EPI_ISL_422517,2020-03-20,SARS-CoV-2/human/USA/NY-PV09147/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C8782T T9477A C14805T G25979T T28144C C28657T C28863T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT370986 EPI_ISL_422547,2020-03-20,SARS-CoV-2/human/USA/NY-PV09190/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T G625T C1059T C3037T G11083T C14408T A23403G G25563T AGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29776- >MT370987 EPI_ISL_421630,2020-03-18,SARS-CoV-2/human/USA/NY-PV09092/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1917T C3037T C7716T C14408T G20005A T21458C A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370988 EPI_ISL_422552,2020-03-20,SARS-CoV-2/human/USA/NY-PV09197/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T G22225A A23403G G25563T G29540A GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370989 EPI_ISL_421632,2020-03-19,SARS-CoV-2/human/USA/NY-PV09098/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T T28105C G29540A GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370990 EPI_ISL_421626,2020-03-21,SARS-CoV-2/human/USA/NY-PV09083/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCT1- C241T C1059T C3037T C10851T C14408T C18395T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370991 EPI_ISL_421599,2020-03-21,SARS-CoV-2/human/USA/NY-PV09028/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C10851T C14408T C22530T A23403G G25305T G25563T CAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29769- >MT370992 EPI_ISL_421625,2020-03-20,SARS-CoV-2/human/USA/NY-PV09080/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T A23403G G25563T CAACAGAGCCTAAAAAGG29367- GATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29751- >MT370993 EPI_ISL_422499,2020-03-19,SARS-CoV-2/human/USA/NY-PV09125/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT370994 EPI_ISL_422550,2020-03-20,SARS-CoV-2/human/USA/NY-PV09194/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T C18877T A23403G G25563T C26681T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370995 EPI_ISL_422507,2020-03-20,SARS-CoV-2/human/USA/NY-PV09135/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C13548T C14408T G21485T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT370996 EPI_ISL_422540,2020-03-19,SARS-CoV-2/human/USA/NY-PV09181/2020,United States / New York / Manhattan ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370997 EPI_ISL_421628,2020-03-19,SARS-CoV-2/human/USA/NY-PV09088/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29770- >MT370998 EPI_ISL_422542,2020-03-19,SARS-CoV-2/human/USA/NY-PV09183/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT370999 EPI_ISL_421593,2020-03-20,SARS-CoV-2/human/USA/NY-PV09006/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C241T C1059T C3037T A11781G C14408T G16381A A23403G G25563T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT371000 EPI_ISL_422488,2020-03-21,SARS-CoV-2/human/USA/NY-PV09045/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371001 EPI_ISL_422533,2020-03-19,SARS-CoV-2/human/USA/NY-PV09171/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371003 EPI_ISL_421622,2020-03-20,SARS-CoV-2/human/USA/NY-PV09076/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGA1- C241T C1059T T2222C C3037T C14408T A23403G G25563T AGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29776- >MT371004 EPI_ISL_422510,2020-03-20,SARS-CoV-2/human/USA/NY-PV09139/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C11916T C14408T C18998T A20553G A23403G G25563T C28957T G29540A GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371005 EPI_ISL_422534,2020-03-19,SARS-CoV-2/human/USA/NY-PV09172/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C1917T C3037T C14408T G20005A T21458C A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371006 EPI_ISL_421617,2020-03-20,SARS-CoV-2/human/USA/NY-PV09068/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371007 EPI_ISL_422536,2020-03-19,SARS-CoV-2/human/USA/NY-PV09177/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371008 EPI_ISL_422529,2020-03-22,SARS-CoV-2/human/USA/NY-PV09165/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371009 EPI_ISL_422489,2020-03-21,SARS-CoV-2/human/USA/NY-PV09057/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371010 EPI_ISL_422504,2020-03-19,SARS-CoV-2/human/USA/NY-PV09130/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T T10831C C14408T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371011 EPI_ISL_422526,2020-03-22,SARS-CoV-2/human/USA/NY-PV09161/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTC1- C241T C2416T C3037T T12112C C14408T G21974C A23403G G25563T G26233T GTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29757- >MT371012 EPI_ISL_422531,2020-03-19,SARS-CoV-2/human/USA/NY-PV09169/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371013 EPI_ISL_421634,2020-03-21,SARS-CoV-2/human/USA/NY-PV09102/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371014 EPI_ISL_421601,2020-03-21,SARS-CoV-2/human/USA/NY-PV09030/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTA1- C241T C1059T C3037T C8660T C14408T A23403G G25563T GTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29757- >MT371015 EPI_ISL_422544,2020-03-20,SARS-CoV-2/human/USA/NY-PV09187/2020,United States / New York / Westchester County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T T12045C C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371016 EPI_ISL_422561,2020-03-22,SARS-CoV-2/human/USA/NY-PV09308/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T A23403G C27046T GGG28881AAC AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371017 EPI_ISL_422562,2020-03-22,SARS-CoV-2/human/USA/NY-PV09309/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1267T C3037T G4255T C14408T T16456G C20051T A23403G A26530G GGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29778- >MT371018 EPI_ISL_422543,2020-03-20,SARS-CoV-2/human/USA/NY-PV09186/2020,United States / New York / Bronx ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T T29308C AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371019 EPI_ISL_421600,2020-03-21,SARS-CoV-2/human/USA/NY-PV09029/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G C23453T G25563T AGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29776- >MT371020 EPI_ISL_422500,2020-03-19,SARS-CoV-2/human/USA/NY-PV09126/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATC1- C241T C1059T C3037T C14408T A23403G G25563T G27593T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371021 EPI_ISL_421595,2020-03-20,SARS-CoV-2/human/USA/NY-PV09020/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371022 EPI_ISL_422519,2020-03-22,SARS-CoV-2/human/USA/NY-PV09151/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C1917T C3037T C14408T G20005A T21458C A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371023 EPI_ISL_421608,2020-03-21,SARS-CoV-2/human/USA/NY-PV09046/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371024 EPI_ISL_421609,2020-03-21,SARS-CoV-2/human/USA/NY-PV09047/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACG1- C241T C1059T C3037T C14408T G17278T A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371025 EPI_ISL_422530,2020-03-22,SARS-CoV-2/human/USA/NY-PV09168/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C619T C1059T C3037T C5575T C14408T A14912G A23403G G25563T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371026 EPI_ISL_421629,2020-03-19,SARS-CoV-2/human/USA/NY-PV09090/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C3037T C14408T C18877T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371027 EPI_ISL_421620,2020-03-20,SARS-CoV-2/human/USA/NY-PV09073/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C19018T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371028 EPI_ISL_421596,2020-03-21,SARS-CoV-2/human/USA/NY-PV09021/2020,United States / New York / Staten Island ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371029 EPI_ISL_422508,2020-03-20,SARS-CoV-2/human/USA/NY-PV09137/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T G6443A A13755G C14408T A23403G G25563T G28827T TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT371030 EPI_ISL_422491,2020-03-19,SARS-CoV-2/human/USA/NY-PV09115/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGT1- C241T C3037T C3695T A4544T C14408T A20268G A23403G C29743T ACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29768- >MT371031 EPI_ISL_421610,2020-03-20,SARS-CoV-2/human/USA/NY-PV09050/2020,United States / New York / Nassau County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGA1- C241T C1059T C3037T C14408T A23403G G25563T AATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29770- >MT371032 EPI_ISL_422501,2020-03-19,SARS-CoV-2/human/USA/NY-PV09127/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C1059T C3037T C14408T A23403G G25563T AATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29770- >MT371033 EPI_ISL_422558,2020-03-21,SARS-CoV-2/human/USA/NY-PV09304/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C14408T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT371034 EPI_ISL_422525,2020-03-22,SARS-CoV-2/human/USA/NY-PV09158/2020,United States / New York / Brooklyn ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371035 EPI_ISL_421598,2020-03-21,SARS-CoV-2/human/USA/NY-PV09025/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29239A G29540A AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371036 EPI_ISL_422553,2020-03-20,SARS-CoV-2/human/USA/NY-PV09198/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1594T C3037T C14408T A23403G G25563T AGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29780- >MT371037 EPI_ISL_422537,2020-03-19,SARS-CoV-2/human/USA/NY-PV09178/2020,United States / New York / Manhattan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTC1- C241T C3037T C13730T C14408T A23403G G25429T GTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29759- >MT371038 EPI_ISL_422546,2020-03-19,SARS-CoV-2/human/USA/NY-PV09189/2020,United States / New York / Queens ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTA1- C241T C1059T C1917T C3037T C14408T G20005A A23403G G25563T G25740T C28332T A28848G TAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29775- >MT371047 EPI_ISL_428670,2020-03-16,SARS-CoV-2/human/LKA/COV38/2020,Sri Lanka C37A G1397A C5986T G11083T G18984C C20483T T26181G T28688C G29465T G29742T >MT371048 EPI_ISL_428671,2020-03-10,SARS-CoV-2/human/LKA/COV53/2020,Sri Lanka C241T C3037T C14408T A23403G GGG28881AAC >MT371049 EPI_ISL_428672,2020-03-19,SARS-CoV-2/human/LKA/COV91/2020,Sri Lanka C241T C3037T G4201T C14408T A23403G C26527T >MT371050 EPI_ISL_428673,2020-03-31,SARS-CoV-2/human/LKA/COV486/2020,Sri Lanka C1762T C14805T T17247C G26144T >MT371568 ,2020-03-22,SARS-CoV-2/human/CZE/2256/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- C241T C3037T T6119C C14408T T21640B A21643M A21906G A23403G G25534T C27046T GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT371569 EPI_ISL_425229,2020-03-19,SARS-CoV-2/human/CZE/CzechiaMotol_2122/2020,Czech Republic / Prague ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAAC1--------------------------------------------------------------------------T C241T C3037T C14408T C22432T A23403G G25249T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT371570 ,2020-03-21,SARS-CoV-2/human/CZE/CzechiaMotol_2448/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCAT1- C241T C3037T C14408T A21643C A23403G GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT371571 ,2020-03-18,SARS-CoV-2/human/CZE/CzechiaMotol_1968/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCAT1- C241T C3037T C14408T A23403G GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT371572 ,2020-03-19,SARS-CoV-2/human/CZE/CzechiaMotol_2174/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCAT1- C241T C3037T C14408T A21643C C22432T A23403G GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT371573 ,2020-03-17,SARS-CoV-2/human/CZE/CzechiaMotol_1899/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCAT1- C241T C3037T C14408T A23403G GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT371574 ,2020-03-18,SARS-CoV-2/human/CZE/CzechiaMotol_1967/2020,Czech Republic ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCAT1- C241T C3037T C14408T A23403G GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT372480 EPI_ISL_417918,2020-03-18,SARS-CoV-2/human/MYS/188407/2020,Malaysia / Kuala Lumpur ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C6310A C6312A G11083T C13730T C19524T C23929T T25473C C28311T G29862A G29864R TG29867AA C29870A >MT372481 EPI_ISL_417917,2020-03-20,SARS-CoV-2/human/MYS/189332/2020,Malaysia / Kuala Lumpur ATTAA1- T2737A C6310A C6312A G11083T C13730T G13975A C19524T C23929T C28311T T29859W GG29861AA G29864A TG29867AA C29870A >MT372482 EPI_ISL_417920,2020-03-22,SARS-CoV-2/human/MYS/190300/2020,Malaysia / Kuala Lumpur ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T77A C84A A5440R C6312A G11083T GT13398VC T13402W C13730T C19524T AG20463GA TG20466CA G20469A A20472C AGG20475TTA T20479A C22437T C22439A TGA22441GAT C22446A C22448T C22450T CA22452GG C23034T T23119A C23929T T26908Y C26912T A26915W GC26918CA TC26921GS C28311T GG29861AA G29864A TG29867AA C29870A >MT372483 EPI_ISL_417919,2020-03-14,SARS-CoV-2/human/MYS/186197/2020,Malaysia / Kuala Lumpur ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGC1- TA2629AT GT2632TA C2636T A2679C T2737A T5568C A7690G A10215G A10225C T11104C T12113C A13409G C13424T G13469A T15242A AA15247GG TG15432AA TG15437AA C15441A G15449A C15469T G15475A A15478G T15969A A16233W AGAC16268GAGT AC16408WS T17549C A17553G T17579W T17582A G17601A T17603W T17618A TC17643AA T17647A T17650A T17652A G17667A T17673A A17871G TC17873CT G17887A T22907A A23122T G24953R AG26924RK AG26945GC A26973R G26998R CAT27106TGC T28524K A29700G AG29704GA ACTT29707GACA G29744R CCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29802- >MT374101 EPI_ISL_417518,2020-02-04,SARS-CoV-2/human/TWN/CGMH-CGU-02/2020,China / Taiwan / Taoyuan C8782T A16841G C21707T C24213T ACTTGAACTGCAAGATCATAATGAAACTTGTCACGCCTAAACGAACATGAAATTTCTTGTTTTCTTAGGAATCATCACAACTGTAGCTGCATTTCACCAAGAATGTAGTTTACAGTCATGTACTCAACATCAACCATATGTAGTTGATGACCCGTGTCCTATTCACTTCTATTCTAAATGGTATATTAGAGTAGGAGCTAGAAAATCAGCACCTTTAATTGAATTGTGCGTGGATGAGGCTGGTTCTAAATCACCCATTCAGTACATCGATATCGGTAATTATACAGTTTCCTGTTTACCTTTTACAATTAATTGCCAGGAACCTAAATTGGGTAGTCTTGTAGTGCGTTGTTCGTTCTATGAAGACTTTTTAGAGTATCAT27848- >MT374102 EPI_ISL_417519,2020-03-05,SARS-CoV-2/human/TWN/CGMH-CGU-06/2020,China / Taiwan / Taoyuan AT1- C1059T G1397A G11083T C23934T T28648C T28688C G29742T >MT374103 EPI_ISL_417520,2020-03-09,SARS-CoV-2/human/TWN/CGMH-CGU-07/2020,China / Taiwan / Taoyuan ATTAAAGGTTT1- C1059T G1397A G11083T C19547T C23934T T28648C T28688C G29742T AAAAAA29898- >MT374104 EPI_ISL_417521,2020-03-10,SARS-CoV-2/human/TWN/CGMH-CGU-08/2020,China / Taiwan / Taoyuan C1059T G1397A G11083T C23934T T28648C T28688C G29742T >MT374105 EPI_ISL_417522,2020-03-13,SARS-CoV-2/human/TWN/CGMH-CGU-09/2020,China / Taiwan / Taoyuan AT1- G11083T C14805T T17247C G26144T A29903- >MT374106 EPI_ISL_417523,2020-03-13,SARS-CoV-2/human/TWN/CGMH-CGU-10/2020,China / Taiwan / Taoyuan AT1- C228T G1397A G9479T A9514G G11083T A19818G G26720C G28202T T28688C T28835C G29742T AA29902- >MT374107 EPI_ISL_417524,2020-03-14,SARS-CoV-2/human/TWN/CGMH-CGU-11/2020,China / Taiwan / Taoyuan A1- C228T G1397A G9479T A9514G G11083T A19818G G26720C G28202T T28688C T28835C G29742T >MT374108 EPI_ISL_417525,2020-03-14,SARS-CoV-2/human/TWN/CGMH-CGU-12/2020,China / Taiwan / Taoyuan AT1- C241T C3037T C14408T A23403G G23856T GGG28881AAC >MT374109 ,2020-03-17,SARS-CoV-2/human/TWN/CGMH-CGU-13/2020,China / Taiwan ATT1- C241T C3037T C6026T C14408T G22051T A23403G GGG28881AAC AA29902- >MT374110 ,2020-03-17,SARS-CoV-2/human/TWN/CGMH-CGU-14/2020,China / Taiwan ATT1- C241T C1059T C3037T C14408T A23403G G25563T >MT374111 ,2020-03-17,SARS-CoV-2/human/TWN/CGMH-CGU-15/2020,China / Taiwan C241T C3037T C14408T A20268G A23403G G29473A G29734C >MT374112 ,2020-03-16,SARS-CoV-2/human/TWN/CGMH-CGU-16/2020,China / Taiwan AT1- C241T C3037T C14408T C17004T C18877T G21204T A23403G G25563T G25767T >MT374113 ,2020-03-17,SARS-CoV-2/human/TWN/CGMH-CGU-17/2020,China / Taiwan ATTA1- C241T C1059T C3037T T3178G C14408T G21225T A23403G G25563T >MT374114 ,2020-03-18,SARS-CoV-2/human/TWN/CGMH-CGU-18/2020,China / Taiwan AT1- C241T C3037T C14408T A23403G G25785T GGG28881AAC >MT374115 ,2020-03-18,SARS-CoV-2/human/TWN/CGMH-CGU-19/2020,China / Taiwan ATTA1- C241T C3037T C14408T C18877T A23403G G25563T A29903- >MT374116 ,2020-03-18,SARS-CoV-2/human/TWN/CGMH-CGU-20/2020,China / Taiwan AT1- C241T C3037T C14408T A23403G C25810T GGG28881AAC >MT375428 EPI_ISL_429597,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4538/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATA1- C241T C3037T C14408T T21146D A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT375429 EPI_ISL_429599,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4547/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAA1- C241T T833C C1059T C3037T C4683T C14408T A23403G G25563T C27964T G29864A TG29867AA >MT375430 EPI_ISL_429600,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4549/2020,United States / Washington ATTAAAGGTTTATACCTTCC1- A31T C36T C241T C1059T C3037T C14408T C16750T A23403G G25563T G29553A >MT375431 EPI_ISL_429601,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4552/2020,United States / Idaho ATTAAAGGTTTAT1- AACC30CTTT C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT375432 EPI_ISL_429602,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4564/2020,United States / Washington ATTAAAGGTT1-------ACA C241T C1059T C3037T C14408T A23403G G25563T G28541T G29553A >MT375433 EPI_ISL_429603,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4565/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT375434 EPI_ISL_429605,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4578/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C6040T C14408T T22318C A23403G G25563T -29904AAAAAAAAAAAAA >MT375435 EPI_ISL_429606,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4579/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCT1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAA29898- >MT375436 EPI_ISL_429607,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4582/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T T8883C TT8885AA C14408T T21146A G21151T A23403G G28812T AAAA29900- >MT375437 EPI_ISL_429608,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4593/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTA1- C241T C1059T C3037T C14408T C16289T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT375438 EPI_ISL_429609,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4594/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAA29900- >MT375439 EPI_ISL_429610,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4598/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T T29867A >MT375440 EPI_ISL_429611,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4602/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- A34H C36T C241T C1059T C3037T C14408T A23403G G25563T A29903- >MT375441 EPI_ISL_429612,2020-03-26,SARS-CoV-2/human/USA/WA-UW-4609/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTA1- C36T C6310T C8782T C17747T A17858G C18060T T19015A G23755T G25677T A25847G C26750T G27327T T28144C AA29902- >MT375442 EPI_ISL_429613,2020-03-26,SARS-CoV-2/human/USA/WA-UW-4611/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAA29890- >MT375443 EPI_ISL_429614,2020-03-26,SARS-CoV-2/human/USA/WA-UW-4612/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T A12148T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT375444 EPI_ISL_429615,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4703/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTA1- C241T C1059T C3037T C3176T C14408T A23403G G25563T G29553A AA29902- >MT375445 EPI_ISL_429616,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4732/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTM C241T C1059T C3037T A10579G C14408T A23403G G25563T A29873C A29903- >MT375446 EPI_ISL_429617,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4734/2020,United States / Washington ATTAAAGGT1- C36T C241T C1059T C3037T C14408T C16869T A23403G G25563T G29553A AA29902- >MT375447 EPI_ISL_429618,2020-03-25,SARS-CoV-2/human/USA/WA-UW-4741/2020,United States / Washington ATTA1---T C36T C241T C1059T C3037T C14408T G19542T A23403G G25563T AA29902- >MT375448 EPI_ISL_429619,2020-03-27,SARS-CoV-2/human/USA/WA-UW-4744/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T A29903- >MT375449 EPI_ISL_429620,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4749/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AA34TT C241T C1059T C3037T C9714G AA9899TT A13693T A14041T G14044T C14408T T14429A T14438C T21723G T21725A T21729D C21732T A23403G G25563T TTC25884AAT >MT375450 EPI_ISL_429621,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4760/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T A761G C1059T G2534A C3037T C14408T G17338T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT375451 EPI_ISL_429622,2020-03-27,SARS-CoV-2/human/USA/WA-UW-4763/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T G16245A A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT375452 EPI_ISL_429623,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4766/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C36T G2840A C8782T C17747T A17858G C18060T A26045G T28144C AAAA29900- >MT375453 EPI_ISL_429624,2020-03-27,SARS-CoV-2/human/USA/WA-UW-4769/2020,United States / Washington ATTAAAGGTTTATACCTT1- C36T C241T C1059T C3037T C14408T A23403G G25563T -29904AA >MT375454 EPI_ISL_429625,2020-03-27,SARS-CoV-2/human/USA/WA-UW-4770/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C241T C1059T C3037T C10989T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT375455 EPI_ISL_429626,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4775/2020,United States / Washington ATTAAAGGTTTA1- C241T C1059T C3037T A10579G C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT375456 EPI_ISL_429627,2020-03-27,SARS-CoV-2/human/USA/WA-UW-4777/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C12488T C14408T A23403G G25563T A29551G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT375457 EPI_ISL_429628,2020-04-06,SARS-CoV-2/human/USA/UNKNOWN-UW-4645/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCA1- C4456T A6693G C8782T C14877T C17747T A17858G C18060T T27228A T28144C A29188T -29904AAAAAAAAAAA >MT375458 EPI_ISL_429629,2020-04-06,SARS-CoV-2/human/USA/WA-UW-4649/2020,United States / Washington ATTA1- C241T C1059T C3037T C5694A C6040T G12071A C14408T C18131T C20081T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT375459 EPI_ISL_429630,2020-04-05,SARS-CoV-2/human/USA/WA-UW-4677/2020,United States / Washington ATTAAAGGTT1- A12T C3037T C14408T A23403G C25418T G28812T AA29902- >MT375460 EPI_ISL_429631,2020-04-06,SARS-CoV-2/human/USA/WA-UW-4695/2020,United States / Washington ATTAAAGGTTTATACC1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT375461 EPI_ISL_429632,2020-04-06,SARS-CoV-2/human/USA/WA-UW-4705/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T -29904AAAAAAAAAAAAA >MT375462 EPI_ISL_429633,2020-04-06,SARS-CoV-2/human/USA/WA-UW-4707/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C1059T C3037T C6040T C8841T C14408T A23403G G25563T A29903- >MT375463 EPI_ISL_429634,2020-04-07,SARS-CoV-2/human/USA/WA-UW-4892/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36B C241T C1059T C3037T C14408T A23403G G25563T -29904AAAA >MT375464 EPI_ISL_429635,2020-04-08,SARS-CoV-2/human/USA/WA-UW-4897/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGT1- C1059T C3037T C14408T A23403G G25563T C27630T G29553A -29904AAAAAAAA >MT375465 EPI_ISL_429636,2020-04-07,SARS-CoV-2/human/USA/WA-UW-4921/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T G11083T C14408T T17506A A17542G A23403G G25563T -29904AAAA >MT375466 EPI_ISL_429637,2020-04-07,SARS-CoV-2/human/USA/WA-UW-4925/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C241T C1059T C3037T C14408T A23403G G25563T C27804T G29553A -29904AA >MT375467 EPI_ISL_429638,2020-04-07,SARS-CoV-2/human/USA/WA-UW-4999/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCG1- C241T C1059T C3037T A10579G C14408T A23403G G25563T >MT375468 EPI_ISL_429639,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5025/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- ACC35WTH C241T C1059T C1437T C3037T C6040T C11036T C14408T A23403G G25563T -29904AAAA >MT375469 EPI_ISL_429640,2020-04-07,SARS-CoV-2/human/USA/CT-UW-5036/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGA1- C3037T C14408T C19263T C19488T A21404T A23403G A25616G C26801T GGG28881AAC >MT375470 EPI_ISL_429641,2020-04-06,SARS-CoV-2/human/USA/CT-UW-5038/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C241T C1059T C3037T C14408T C21552T A23403G G25563T T25733G >MT375471 EPI_ISL_429642,2020-04-06,SARS-CoV-2/human/USA/CT-UW-5043/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAA1- C1059T C3037T C6026T C14408T A23403G G25563T C28836T -29904AAAAAAAAA >MT375472 EPI_ISL_429643,2020-04-08,SARS-CoV-2/human/USA/UNKNOWN-UW-5044/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T C16830T C16859T A23403G G25563T AAAA29900- >MT375473 EPI_ISL_429644,2020-04-08,SARS-CoV-2/human/USA/WA-UW-5065/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAA1- C1059T C3037T C6040T G12071A C14408T C18131T C20081T A23403G G25563T AAAA29900- >MT375474 EPI_ISL_429645,2020-04-06,SARS-CoV-2/human/USA/CT-UW-5073/2020,United States / Connecticut ATTAAAGGTTTAT1- C241T C3037T C14408T C18877T A23403G G25563T T27810C >MT375475 EPI_ISL_429647,2020-04-08,SARS-CoV-2/human/USA/WA-UW-5095/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGG1- C1059T C3037T C14408T A23403G C25513T G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT375476 EPI_ISL_429649,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5144/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATA1- G1148T C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C G29747T -29904AAAAAAAAAAAA >MT375477 EPI_ISL_429650,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5152/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAA1- C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C C29762T -29904AAAAA >MT375478 EPI_ISL_429651,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5158/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34HTT C241T C1059T C3037T C14408T A23403G G25563T G29553A A29903- >MT375479 EPI_ISL_429652,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5164/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AACC34CTTT C1059T C3037T C14408T A23403G G25563T G29553A >MT375480 EPI_ISL_429653,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5166/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTH C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT375481 EPI_ISL_429654,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5169/2020,United States / Washington ATTAAA1- C241T C1059T C3037T C14408T A23403G G25563T C27630T G29553A -29904AA >MT375482 EPI_ISL_429655,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5170/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAA1- C36T C241T C1059T C3037T C14408T C16375T A23403G G25563T G29553A -29904AAAA >MT375483 EPI_ISL_429656,2020-04-02,SARS-CoV-2/human/USA/UNKNOWN-UW-5172/2020,United States ATTAAAG1- C36T C241T C1059T C3037T C14408T G20134T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAA29879- >MT380728 ,2020-03-29,SARS-CoV-2/human/USA/DC-CDC-1734/2020,United States C241T C1059T C3037T C14408T A23403G C24034T G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT380729 ,2020-03-31,SARS-CoV-2/human/USA/VI-CDC-1999/2020,United States C241T C1059T C3037T C9724T T10472Y T11974C C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAA29883- >MT380730 ,2020-04-01,SARS-CoV-2/human/USA/VI-CDC-1993/2020,United States C241T G2813K C3037T C14408T G16181K G18325T A23403G GGG28881AAC A28911R AAAAAAAAAAAAAAAAAAAAA29883- >MT380731 ,2020-03-20,SARS-CoV-2/human/USA/DC-CDC-9096/2020,United States C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT380732 ,2020-03-22,SARS-CoV-2/human/USA/DC-CDC-9092/2020,United States C241T C1059T C3037T C14408T A23403G G25563T G27147T AAAAAAAAAAAAAAAAAAAAA29883- >MT380733 ,2020-03-28,SARS-CoV-2/human/USA/DC-CDC-1738/2020,United States C241T C1059T C3037T C14408T C16260T A23403G G25563T G26690T C28821A AAAAAAAAAAAAAAAAAAAAA29883- >MT380734 ,2020-03-23,SARS-CoV-2/human/USA/LA-CDC-1894/2020,United States C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T C27964T G29543T AAAAAAAAAAAAAAAAAAAAA29883- >MT385414 EPI_ISL_428990,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00104/2020,United States / California / San Francisco C241T C1059T G2764T C3037T C14408T A23403G G25563T >MT385415 EPI_ISL_428991,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00071/2020,United States / California / San Francisco C241T C1059T C3037T C14408T A23403G G25563T C26625T >MT385416 EPI_ISL_428992,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00138/2020,United States / California / San Francisco C241T T833C C1059T C3037T C14408T G15906T C18647T A23403G G25563T C27964T >MT385417 EPI_ISL_428993,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00157/2020,United States / California / San Francisco C241T C1059T C3037T C14408T C21811T A23403G G25563T >MT385418 EPI_ISL_428994,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00703/2020,United States / California / San Francisco A1- C241T C313T C3037T C14408T A23403G G28086T GGG28881AAC >MT385419 EPI_ISL_428995,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00133/2020,United States / California / San Francisco A1- C8782T C17747T A17858G C18060T T28144C >MT385420 EPI_ISL_428996,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00077/2020,United States / California / San Francisco A1- C241T C1059T C3037T C14408T A23403G G25563T C26456T >MT385421 EPI_ISL_428997,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00015/2020,United States / California / San Francisco AT1- C8782T C17747T A17858G C18060T T28144C >MT385422 EPI_ISL_428998,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00084/2020,United States / California / San Francisco AT1- C241T C1059T C3037T C11916T C14408T A23403G G25563T >MT385423 EPI_ISL_428999,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00069/2020,United States / California / San Francisco ATT1- C241T C1059T C3037T C14408T A23403G G25563T >MT385424 EPI_ISL_429000,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00103/2020,United States / California / San Francisco ATT1- C8782T C17747T A17858G C18060T T28144C >MT385425 EPI_ISL_429001,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00046/2020,United States / California / San Francisco ATTA1- C5849T C16887T C17634A >MT385426 EPI_ISL_429002,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00098/2020,United States / California / San Francisco ATTA1- C241T C1059T G2764T C3037T C14408T A23403G G25563T >MT385427 EPI_ISL_429003,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00136/2020,United States / California / San Francisco ATTA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT385428 EPI_ISL_429004,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00085/2020,United States / California / San Francisco ATTAAA1- C241T C3037T C8318A C9724Y C14408T A20268G A23403G C26111T C28854T >MT385429 EPI_ISL_429005,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00079/2020,United States / California / San Francisco ATTAAAGG1- C8782T C17747T A17858G C18060T T28144C >MT385430 EPI_ISL_429006,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00095/2020,United States / California / San Francisco ATTAAAGGT1- G25775T >MT385431 EPI_ISL_429007,2020-03-18,SARS-CoV-2/human/USA/CA-CZB-EX00458/2020,United States / California / San Francisco ATTAAAGGTTT1- C10632T >MT385432 EPI_ISL_429008,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00091/2020,United States / California / San Francisco ATTAAAGGTTT1- C8782T C17747T A17858G C18060T C19952T G24095T T28144C >MT385433 EPI_ISL_429009,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00122/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT385434 EPI_ISL_429010,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00108/2020,United States / California / San Francisco ATTAAAGGTT1- C8782T C10681Y G16377T C17747T A17858G C18060T G25770T T28144C >MT385435 EPI_ISL_429011,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00147/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T C1059T G1685A A2018G C3037T C14408T G17149A A23403G G25563T >MT385436 EPI_ISL_429012,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00016/2020,United States / California / San Francisco ATTAAAGGTTTA1- G1440A G2891A A6944G C9430T >MT385437 EPI_ISL_429013,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00080/2020,United States / California / San Francisco ATTAAAGGTTTA1- C241T G319A C1059T C3037T G11375A C12664T C14408T C19017T C21114T A23403G G25563T >MT385438 EPI_ISL_429014,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00142/2020,United States / California / San Francisco ATTAAAGGTTTA1- C241T C1059T G2764T C3037T C14408T A23403G G25563T C27294T >MT385439 EPI_ISL_429015,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00100/2020,United States / California / San Francisco AT1- C241T C1059T C3037T G8102T C14408T C14877T A23403G G25563T GAACAATGCTA29766- >MT385440 EPI_ISL_429016,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00709/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T C1059T C3037T G8102T C14408T G14712A C14877T A23403G G25563T G28851T A29884C AAAAA29899- >MT385441 EPI_ISL_429017,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00030/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T GTTATG515- C3037T G6032A C14408T C18877T A23403G G25563T C27092T >MT385442 EPI_ISL_429018,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-EX00750/2020,United States / California / San Francisco C241T C1059T C3037T C11916T C13252T C14408T A23403G C23604T G25563T AAAAAAAAAAAAAAAAAA29886- >MT385443 EPI_ISL_429019,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00078/2020,United States / California / San Francisco ATTAAAGGTT1- C6723T C8782T C14925T C17747T A17858G C18060T T28144C AAAAAAAAAAAA29892- >MT385444 EPI_ISL_429020,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00721/2020,United States / California / San Francisco C8782T C17747T A17858G C18060T C21595T T25962G T28144C G28392T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT385445 EPI_ISL_429021,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00045/2020,United States / California / San Francisco A1- G2840A C8782T C17747T A17858G C18060T A26045G T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT385446 EPI_ISL_429022,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00713/2020,United States / California / San Francisco A1- C241T G1145A C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT385447 EPI_ISL_429023,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00740/2020,United States / California / San Francisco AT1- C241T C1059T A2018G A2160G C3037T G12167A C14408T A16060G T21995C A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385448 EPI_ISL_429024,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00705/2020,United States / California / San Francisco ATT1- C241T C1059T C3037T C14408T A23403G G25563T C29614T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385449 EPI_ISL_429025,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00737/2020,United States / California / San Francisco ATTA1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385450 EPI_ISL_429026,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00731/2020,United States / California / San Francisco ATTAA1- C241T C1059T C3037T G9049T T9070C T10960C C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385451 EPI_ISL_429027,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00137/2020,United States / California / San Francisco ATTAAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385452 EPI_ISL_429028,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-EX00746/2020,United States / California / San Francisco ATTAAAG1- C8782T C17747T A17858G C18060T G20002T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385453 EPI_ISL_429029,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00067/2020,United States / California / San Francisco ATTAAAGGTTTA1- C241T C3037T C14408T A20268G A23403G AAAAAAAAAA29894- >MT385454 EPI_ISL_429030,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00072/2020,United States / California / San Francisco AT1- C241T C1059T C3037T AACAGAGAA3933- C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT385455 EPI_ISL_429031,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00139/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385456 EPI_ISL_429032,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00082/2020,United States / California / San Francisco ATTAAAGGTTTA1- C8782T C17747T A17858G C18060T G20002T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385457 EPI_ISL_429033,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00086/2020,United States / California / San Francisco ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385458 EPI_ISL_429034,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00706/2020,United States / California / San Francisco ATTAAAGGTTTAT1- T21895Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385459 EPI_ISL_429035,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00042/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C241T C1059T C3037T C14408T A23403G G25563T C29364T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT385460 EPI_ISL_429036,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00107/2020,United States / California / San Francisco ATTAAAGGTTTA1- C8092T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT385461 EPI_ISL_429037,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00009/2020,United States / California / San Francisco ATTAAAGGTTTATA1- C241T T833C C1059T C3037T A7901G C14408T C18681T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT385462 EPI_ISL_429038,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00707/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T C3037T C11674T C14408T A23403G C27046T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT385463 EPI_ISL_429039,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00036/2020,United States / California / San Francisco ATTAAAGGTTTA1- C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT385464 EPI_ISL_429040,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00701/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C6723T C8782T C14925T C17747T A17858G C18060T T28144C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT385465 EPI_ISL_429041,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00096/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C7083T C8782T G16897T C17747T A17858G C18060T T23672Y T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT385466 EPI_ISL_429042,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00710/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T T833C C1059T C3037T C11008T C14408T A23403G C23557T G25563T C27964T GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT385467 EPI_ISL_429043,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00156/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C241T AAGTCATTT686- C1059T C3037T G13771T C14408T C19524T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT385468 EPI_ISL_429044,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00158/2020,United States / California / San Francisco ATTAAAGGTTTATA1- C8782T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385469 EPI_ISL_429045,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00039/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- C8782T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385470 EPI_ISL_429046,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00125/2020,United States / California / San Francisco ATTAAAGGTTTATA1- C8782T C17747T A17858G C18060T C22624Y T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385471 EPI_ISL_429047,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00154/2020,United States / California / San Francisco ATTAAAGGTTTA1- G7283A C8782T C12897A C17747T A17858G C18060T C24370T T28144C C29218T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385472 EPI_ISL_429048,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00043/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385473 EPI_ISL_429049,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00090/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C8782T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385474 EPI_ISL_429050,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00089/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- A187G C241T C3037T C14408T A23403G GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385475 EPI_ISL_429051,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-EX00741/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C241T C1059T C3037T C11916T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT385476 EPI_ISL_429052,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00714/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T C3037T C14408T T15825C A23403G G28001T GGG28881AAC GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385477 EPI_ISL_429053,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00167/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T C3037T C3784T A11585G C14408T C14786T A23403G GGG28881AAC G29781T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385478 EPI_ISL_429054,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00141/2020,United States / California / San Francisco ATTAAAGGTTTATACCT1- C8782T C17747T A17858G C18060T C26985T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385479 EPI_ISL_429055,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00726/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- C8782T C15101T C17747T A17858G C18060T T28144C ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29869- >MT385480 EPI_ISL_429056,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00101/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C8782T C17747T A17858G C18060T C25006Y T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385481 EPI_ISL_429057,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00076/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- G7283A C8782T C12897A C17747T A17858G C18060T T28144C C29218T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385482 EPI_ISL_429058,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00114/2020,United States / California / San Francisco ATTAAAGGTTTATA1- A8073G C8782T C17747T A17858G C18060T T21346Y C26985T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385483 EPI_ISL_429059,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00110/2020,United States / California / San Francisco ATTAAAGGTTTATACCTT1- C8782T C13968T C17747T A17858G C18060T T28144C GCCACGCGGAGTACGATCGAGT29737- GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385484 EPI_ISL_429060,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00725/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- AAGTCATTT686- C1441T C8782T C9391Y C17747T A17858G C18060T G20002T T28144C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT385485 EPI_ISL_429061,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00151/2020,United States / California / San Francisco ATTAAAGGTTTATACCT1- G3286T C8782T C12897A C16915T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385486 EPI_ISL_429062,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-IX00145/2020,United States / California / San Francisco ATTAAAGGTTT1- C6312A G11083T C13730T C23929T T25099A T28244A C28311T >MT385487 EPI_ISL_429063,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00011/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C1218T C2306T C4252T G7283A C8782T T12640W C12897A C17747T A17858G C18060T C25931A T28144C C29218T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385488 EPI_ISL_429064,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00040/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C8782T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385489 EPI_ISL_429065,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00112/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCC1- C8782T C17747T A17858G C18060T T26532W T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385490 EPI_ISL_429066,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00109/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGGT1- G3251T C8782T C17747T A17858G C18060T T28144C ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT385491 EPI_ISL_429067,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00735/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- C241T C1059T C3037T G14118T C14408T G25563T GGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29705- >MT385492 EPI_ISL_429068,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00027/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCC1- C8782T C17747T A17858G C18060T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385493 EPI_ISL_429069,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00004/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGG1- C8782T C17747T A17858G C18060T G20002T T28144C C29272T GGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29705- >MT385494 EPI_ISL_429070,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-EX00700/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGGTAAC1- C13721T C17747T A17858G C18060T G20002T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385495 EPI_ISL_429071,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-IX00099/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCC1- C1218T C2306T C4252T G7283A C8782T C12897A C17747T A17858G C18060T T28144C C29218T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385496 EPI_ISL_429072,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-EX00719/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- T1963W C8782T C16887T C17747T A17858G C18060T G20002T T28144C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT385497 EPI_ISL_429073,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-IX00017/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCC1- C8782T C17747T A17858G C18060T C20199T T28144C AGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29824- >MT394528 EPI_ISL_450484,2020-03-24,SARS-CoV-2/human/USA/CA-CZB-59X002/2020,United States / CA ATTAAAG1- C9924T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT394529 EPI_ISL_450485,2020-03-24,SARS-CoV-2/human/USA/CA-CZB-59X001/2020,United States / CA ATTAAAGGTTT1- C9924T C23816Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT394530 EPI_ISL_450486,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-59X004/2020,United States / CA ATTA1- C9924T C23525Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT394531 EPI_ISL_450487,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-59X003/2020,United States / CA ATT1- C9924T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT394864 EPI_ISL_425137,2020-03-14,SARS-CoV-2/human/DEU/NRW-53/2020,Germany / Duesseldorf ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT396241 ,2020-03-06,SARS-CoV-2/human/CHN/YN-0306-466/2020,China ATG1431- G15910T >MT396242 EPI_ISL_428482,2020-04-08,SARS-CoV-2/human/IND/nimh-0182/2020,India ATTAAAGGTTTATACCTTCCCAGGT1- C241T C313T G1408T C3037T C7392T C14408T A15435G A23403G G25311T G26467T GGG28881AAC TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396243 EPI_ISL_428481,2020-04-06,SARS-CoV-2/human/IND/nimh-0130/2020,India ATTAAAGGTTTATACCTTCCCAGGTA1- C241T C313T C3037T C7392T C9693T C14408T A15435G A23403G G26467T GGG28881AAC TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396244 EPI_ISL_428487,2020-04-14,SARS-CoV-2/human/IND/nimh-1071/2020,India ATTAAAGGTTTATACCTTCCCAGGTAAC1- C6312A C7392T T8151C C13730T A20435G C23929T G26467T C28311T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396245 EPI_ISL_428484,2020-04-10,SARS-CoV-2/human/IND/nimh-0351/2020,India ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C7392T C13730T C23929T C28311T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396246 EPI_ISL_428483,2020-04-10,SARS-CoV-2/human/IND/nimh-0318/2020,India ATTAAAGGTTTATACCTTCCCAGGTAA1- C6312A C7392T G11083T C13730T A15435R G20419T C23929T G26467T C26801T C28311T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396247 EPI_ISL_428479,2020-04-06,SARS-CoV-2/human/IND/nimh-0113/2020,India ATTAAAGGTTTATACCTTCCCAGGTAA1- C241T C313T C3037T C7392T C14408T A23403G G26467T GGG28881AAC TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT396248 EPI_ISL_428486,2020-04-14,SARS-CoV-2/human/IND/nimh-0996/2020,India ATTAAAGGTTTATACCTTCCCAGGTAA1- C2691Y C6312A C7392T C13730T A15435G T16732G C23929T G26467T C28311T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT407649 EPI_ISL_455683,2020-01-22,SARS-CoV-2/human/CHN/CN1/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C8782T C15480T T28144C AAAAAAAAAAAAAAAAAAAAAA29882- >MT407650 EPI_ISL_455684,2020-01-22,SARS-CoV-2/human/CHN/CN2/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C8782T C13170T C15480T T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT407651 EPI_ISL_455685,2020-01-22,SARS-CoV-2/human/CHN/CN5/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- G6337T C8782T C15480T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT407652 EPI_ISL_455686,2020-01-26,SARS-CoV-2/human/CHN/CN3/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- A19722G C23525T AAAAAAAAAAAAAAAAAAAA29884- >MT407653 EPI_ISL_455687,2020-01-26,SARS-CoV-2/human/CHN/CN4/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C2485T T3380C C8782T T9370G T13954G C18060T T28144C AAAAAAAAAAAAAAAAAAAA29884- >MT407654 EPI_ISL_455688,2020-03-24,SARS-CoV-2/human/CHN/OS1/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- G11083T G26144T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT407655 EPI_ISL_455689,2020-03-24,SARS-CoV-2/human/CHN/OS5/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- A2480G C2558T G11083T C14805T G26144T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT407656 EPI_ISL_455690,2020-03-24,SARS-CoV-2/human/CHN/OS6/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T C14408T C14980T T16413C A20268G A23403G A29874C AAAAAAAAAAAAAAAAAAAA29884- >MT407657 EPI_ISL_455691,2020-03-24,SARS-CoV-2/human/CHN/OS3/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T A4297G C14408T A20268G A23403G G29734C GTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29825- >MT407658 EPI_ISL_455692,2020-03-24,SARS-CoV-2/human/CHN/OS2/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C8782T T28144C ATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29819- >MT407659 EPI_ISL_455693,2020-03-24,SARS-CoV-2/human/CHN/OS4/2020,China / Zhejiang ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T C14408T T19839C A23403G GGG28881AAC CA29870TG AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT412134 EPI_ISL_450442,2020-02-24,SARS-CoV-2/human/CHN/HN03/2020,China ATTAAAGGTTTATACCTTCCCAGG1- A270G T4402C G5062T C8782T T28144C AAAAAAAAAAAA29892- >MT412135 EPI_ISL_437097,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20010/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTT1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412136 EPI_ISL_437098,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20011/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G11083T T11560W C14408T G20616T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412137 EPI_ISL_437099,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20012/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T A20268G A23403G AAAAAAAA29896- >MT412138 EPI_ISL_437100,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20013/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G T27299C T28120Y GGG28881AAC T29148C CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT412139 EPI_ISL_437101,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20014/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T T17166C A23403G C25665Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412140 EPI_ISL_437102,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20015/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T C16428T A23403G G25563T AAAAAAAAAAAAAAAA29888- >MT412141 EPI_ISL_437103,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20016/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C12809T C14408T A23403G G25563T C26625T C27625Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412142 EPI_ISL_437104,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20017/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G11391S C14408T A23403G G25563T C26060T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT412143 EPI_ISL_437105,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20018/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412144 EPI_ISL_437106,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20019/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A187R C241T C313Y T727Y C3037T C14408T A23403G C25916Y GGG28881RRS C29774Y AAAAAAAAAAAAA29891- >MT412145 EPI_ISL_437107,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20020/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T C14408T C18928Y A23403G G25563T C27964T AAAAAAAAA29895- >MT412146 EPI_ISL_437108,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20021/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A19310W A23403G G25563T C26060T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT412147 EPI_ISL_437109,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20022/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A23403G C25665Y ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT412148 EPI_ISL_437110,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20023/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A5011M C14408T C20051Y A23403G G25563T CTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29831- >MT412149 EPI_ISL_437111,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20024/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT412150 EPI_ISL_437112,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20025/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT412151 EPI_ISL_437113,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20026/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C1441T C3037T C14408T A23403G G25563T C25578T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT412152 EPI_ISL_437114,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20027/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C2723T C3037T T3541Y C11866T C14408T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT412153 EPI_ISL_437115,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20028/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412154 EPI_ISL_437116,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20029/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T ATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29833- >MT412155 EPI_ISL_437117,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20030/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C11916T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT412156 EPI_ISL_437118,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20031/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C14408T A23403G G25563T TTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29822- >MT412157 EPI_ISL_437119,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20032/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT412158 EPI_ISL_437120,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20033/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G578A T5446C C8782T C17747Y A17858G C18060T A24694T T28144C G29825A CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412159 EPI_ISL_437121,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20034/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C228T G1397A G3476A C5467T G9479T A9514G G11083T G26720C T28688C T28835C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412160 EPI_ISL_437122,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20035/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A G922A C3177T C8782T T18736C A19392M A19508R C24034T A25501T T26729C G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412161 EPI_ISL_437123,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20036/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T C16338T T17497C A23403G G25563T G25644T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT412162 EPI_ISL_437124,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20037/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C14408T A23403G G25563T C28846T AATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29814- >MT412163 EPI_ISL_437125,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20038/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T G2849R C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412164 EPI_ISL_437126,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20039/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T TGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29807- >MT412165 EPI_ISL_437127,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20040/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G524A T833C C1059T C3037T G14290T C14408T A23403G G25437T G25563T C27964T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT412166 EPI_ISL_437128,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20041/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T C17569T A23403G G25563T C26606T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT412167 EPI_ISL_437129,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20042/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- T490A G922A C3177T C8782T T18736C A22003G C24034T T26729C G27074A G28077C T28144C A29700G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT412168 EPI_ISL_437130,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20043/2020,United States / Michigan ATTAAAGGTTTATACCTTC1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412169 EPI_ISL_437131,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20044/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT412170 EPI_ISL_437132,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20045/2020,United States / Michigan ATTAAAGGTTTA1- C241T C1059T C3037T C3653Y T5408Y C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412171 EPI_ISL_437133,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20046/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G11083K C14408T A23403G G25563T AAAAAAAAA29895- >MT412172 EPI_ISL_437134,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20047/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C3876T C14408T T23042C A23403G AAAAAA29898- >MT412173 EPI_ISL_437135,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20048/2020,United States / Michigan ATTAAAGGT1- C241T C3037T C3876T C14408T T23042C A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412174 EPI_ISL_437136,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20049/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C3876T C14408T T23042C A23403G AAAAAAA29897- >MT412175 EPI_ISL_437137,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20050/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C6040T C8782T C9857T G12478A T18736C C24034T T26729C G28077C T28144C C28887T C28896G A29700G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412176 EPI_ISL_437138,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20051/2020,United States / Michigan ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412177 EPI_ISL_437139,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20052/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T C8782T T18736C A22003G C24034T A26096R T26729C G28077C T28144C A29700G AAAAAAAA29896- >MT412178 EPI_ISL_437140,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20053/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAAC1- C241T C1059T C1380T C3037T C14408T T18384C T21994Y A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412179 EPI_ISL_437141,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20054/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T GCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29830- >MT412180 EPI_ISL_437142,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20055/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412181 EPI_ISL_437143,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20056/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T G7756T C14408T G23302T A23403G G25563T TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT412182 EPI_ISL_437144,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20057/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT412183 EPI_ISL_437145,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20058/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A T1171Y C3177T C8782T C15017Y T18736C A22003R A22622R C24034T T26729C G28077C T28144C A29700G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412184 EPI_ISL_437146,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20059/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACA1- C241T C1059T C3037T C8123T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412185 EPI_ISL_437147,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20060/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412186 EPI_ISL_437148,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20061/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C4582T A5011M C14408T A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT412187 EPI_ISL_437149,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20062/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T A29433R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412188 EPI_ISL_437150,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20063/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAA29889- >MT412189 EPI_ISL_437151,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20064/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T C16989T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412190 EPI_ISL_437152,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20065/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C12120T C14408T G16846T A23403G G25563T C27847T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412191 EPI_ISL_437153,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20066/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412192 EPI_ISL_437154,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20067/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A19408R A23403G G25563T C27847T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT412193 EPI_ISL_437155,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20068/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T658W C4455T C8782T C17010T C17747Y A17858G C18060T T19544Y T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412194 EPI_ISL_437156,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20069/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412195 EPI_ISL_437157,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20070/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412196 EPI_ISL_437158,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20071/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412197 EPI_ISL_437159,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20072/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T C17747T A17858G C18060T A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412198 EPI_ISL_437160,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20073/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T1918C C3037T C14408T C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412199 EPI_ISL_437161,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20074/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T G27877T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412200 EPI_ISL_437162,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20075/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412201 EPI_ISL_437163,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20076/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C5549T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412202 EPI_ISL_437164,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20077/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C1380T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412203 EPI_ISL_437165,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20078/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C2933T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412204 EPI_ISL_437166,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20079/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412205 EPI_ISL_437167,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20080/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C12120T C14408T G16846T A23403G G25563T C27847T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412206 EPI_ISL_437168,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20081/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412207 EPI_ISL_437169,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20082/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412208 EPI_ISL_437170,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20083/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T A23403G C25665T C25669T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412209 EPI_ISL_437171,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20084/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C925Y C1059T C3037T G9398R C14408T G19435K G23069K A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT412210 EPI_ISL_437172,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20085/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T C25976A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412211 EPI_ISL_437173,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20086/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412212 EPI_ISL_437174,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20087/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C17474T C18877T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412213 EPI_ISL_437175,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20088/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412214 EPI_ISL_437176,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20089/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT412215 EPI_ISL_437177,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20090/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T C9924T C14408T T15354C C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT412216 EPI_ISL_437178,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20091/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT412217 EPI_ISL_437179,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20092/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412218 EPI_ISL_437180,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20093/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412219 EPI_ISL_437181,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20094/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C14408T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT412220 EPI_ISL_437182,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20095/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412221 EPI_ISL_437183,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20096/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412222 EPI_ISL_437184,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20097/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412223 EPI_ISL_437185,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20098/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412224 EPI_ISL_437186,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20099/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T A5011C C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412225 EPI_ISL_430868,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5177/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGAC1- A187G C241T C1616T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAA29882- >MT412226 EPI_ISL_430869,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5178/2020,United States / Washington A1- C241T C1059T C3037T A6729C C14408T A23403G G25563T G29553A >MT412227 EPI_ISL_430871,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5181/2020,United States / Washington ATTAAAGGTTTA1- AACC34HTTH C241T C1059T C3037T C14408T A23403G G25563T C29724T >MT412228 EPI_ISL_430872,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5182/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C1385T C4320T C8782T C17747T A17858G C18060T C23673T C24382T T28144C -29904AAAAAAA >MT412229 EPI_ISL_430873,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5189/2020,United States / Washington ATTAAAGGTTTA1- C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT412230 EPI_ISL_430874,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5190/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT412231 EPI_ISL_430875,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5192/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCA1- C1059T C3037T C14408T A23403G G25563T >MT412232 EPI_ISL_430876,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5194/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCT1- TGGTTG519- C1059T C3037T C6027T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412233 EPI_ISL_430881,2020-03-13,SARS-CoV-2/human/USA/UNKNOWN-UW-531/2020,United States ATTAAAGGTTTATACCTTCCCAGGTA1- AACC34TTTA C8782T C17747T A17858G C18060T G21255C T28144C ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29869- >MT412234 EPI_ISL_430895,2020-03-13,SARS-CoV-2/human/USA/WA-UW-604/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- AAC34TTT C8782T C9866T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412235 EPI_ISL_430888,2020-03-13,SARS-CoV-2/human/USA/WA-UW-558/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGG1- A31T AAC34TTT C8782T C17747T A17858G C18060T A27397G T28144C >MT412236 EPI_ISL_430891,2020-03-12,SARS-CoV-2/human/USA/WA-UW-586/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AAC34TTT C241T T833C C1059T C3037T G11222T C14408T C14676T A23403G G25563T C27964T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412237 EPI_ISL_430894,2020-03-12,SARS-CoV-2/human/USA/WA-UW-602/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AAC34TTT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT412238 EPI_ISL_430892,2020-03-12,SARS-CoV-2/human/USA/WA-UW-596/2020,United States / Washington ATTAAAGGTTTATACCTTCCCA1- C36T C8782T C17747T A17858G C18060T C18788T C21306T A27525G T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412239 EPI_ISL_430886,2020-03-10,SARS-CoV-2/human/USA/UNKNOWN-UW-547/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C8782T G11083T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412240 EPI_ISL_430893,2020-03-12,SARS-CoV-2/human/USA/WA-UW-600/2020,United States / Washington ATTAAAGGTTTATA1- A34W C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412241 EPI_ISL_430887,2020-03-12,SARS-CoV-2/human/USA/WA-UW-555/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTAT1- C8782T C17747T A17858G C18060T C23604A T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412242 EPI_ISL_430879,2020-03-11,SARS-CoV-2/human/USA/UNKNOWN-UW-526/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACA1- A31T C36T C241T C1059T C3037T C14408T A23403G G25563T -29904AAAAAAAAAAA >MT412243 EPI_ISL_430890,2020-03-12,SARS-CoV-2/human/USA/UNKNOWN-UW-581/2020,United States ATTAAAGGTTT1- A31W C36T C8782T C17747T A17858G C18060T T28144C A28910T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT412244 EPI_ISL_430889,2020-03-12,SARS-CoV-2/human/USA/WA-UW-572/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AC35HT C8782T C17747T A17858G C18060T G22984A T27384C T28144C -29904AAAAAAAAAA >MT412245 EPI_ISL_430882,2020-03-11,SARS-CoV-2/human/USA/UNKNOWN-UW-536/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C14408T G15760A A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412246 EPI_ISL_430878,2020-03-11,SARS-CoV-2/human/USA/WA-UW-525/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T A14604G C17747T A17858G C18060T C21911T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412247 EPI_ISL_430880,2020-03-12,SARS-CoV-2/human/USA/WA-UW-530/2020,United States / Washington A1- T3G A31T C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT412248 EPI_ISL_430877,2020-03-12,SARS-CoV-2/human/USA/WA-UW-524/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C8782T C17747T A17858G C18060T T28144C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT412249 EPI_ISL_430884,2020-03-12,SARS-CoV-2/human/USA/WA-UW-543/2020,United States / Washington ATTAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT412250 EPI_ISL_430883,2020-03-12,SARS-CoV-2/human/USA/WA-UW-542/2020,United States / Washington ATTAAAGGTTT1- TA13AG C16A T18G AG22GA C36Y C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412251 EPI_ISL_430885,2020-03-12,SARS-CoV-2/human/USA/WA-UW-546/2020,United States / Washington ATTAA1- A31T C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT412252 EPI_ISL_430867,2020-03-11,SARS-CoV-2/human/USA/WA-UW-517/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1------------------------------TTY C36T T7084C C8782T C17747T A17858G C18060T C21410T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412253 EPI_ISL_430870,2020-03-11,SARS-CoV-2/human/USA/WA-UW-518/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AAC34TTT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412254 EPI_ISL_430897,2020-04-02,SARS-CoV-2/human/USA/UNKNOWN-UW-5199/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T C18129T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412255 EPI_ISL_430898,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5200/2020,United States / Washington ATTAAAGGTTTATACCTTCCCA1- A31T AAC34TTT C241T C1059T C1437T C3037T C6040T C11036T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAA29879- >MT412256 EPI_ISL_430899,2020-04-01,SARS-CoV-2/human/USA/WA-UW-5203/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T C241T C1059T C3037T C14408T A23403G T24565G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412257 EPI_ISL_430900,2020-04-02,SARS-CoV-2/human/USA/WA-UW-5205/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T C4320T C8782T C17747T A17858G C18060T C23673T C24382T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412258 EPI_ISL_430901,2020-04-05,SARS-CoV-2/human/USA/WA-UW-5359/2020,United States / Washington ATTAAA1- C36T C241T C1059T C3037T C14408T C19763T A23403G G25563T A29903- >MT412259 EPI_ISL_430902,2020-04-05,SARS-CoV-2/human/USA/WA-UW-5364/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T T8431C C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412260 EPI_ISL_430903,2020-04-05,SARS-CoV-2/human/USA/UNKNOWN-UW-5368/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCA1- G8602A C8782T C17747T A17858G C18060T C25418A G26152A T27404G T28144C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT412261 EPI_ISL_430904,2020-04-05,SARS-CoV-2/human/USA/WA-UW-5371/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412262 EPI_ISL_430905,2020-04-05,SARS-CoV-2/human/USA/WA-UW-5397/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C13225T C14408T A23403G G25563T C27630T G29553A AAA29901- >MT412263 EPI_ISL_430906,2020-04-05,SARS-CoV-2/human/USA/WA-UW-5400/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T G16912T C18885T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412264 EPI_ISL_430907,2020-04-07,SARS-CoV-2/human/USA/CT-UW-5595/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C3037T T14104C C14408T C18877T C21914T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412265 EPI_ISL_430908,2020-04-07,SARS-CoV-2/human/USA/CT-UW-5599/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C14408T A23403G G25563T TG27504AA G27670C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412266 EPI_ISL_430909,2020-04-08,SARS-CoV-2/human/USA/UNKNOWN-UW-5605/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- T76C A79T C241T C1059T C3037T G12243T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412267 EPI_ISL_430910,2020-04-08,SARS-CoV-2/human/USA/UNKNOWN-UW-5614/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGT1- C241T C1059T C3037T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412268 EPI_ISL_430911,2020-04-08,SARS-CoV-2/human/USA/WA-UW-5617/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- AC35WT C241T C1059T C3037T G10521T C14408T G16912T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412269 EPI_ISL_430912,2020-04-08,SARS-CoV-2/human/USA/WA-UW-5629/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1------------------------------------A C241T C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412270 EPI_ISL_430913,2020-04-06,SARS-CoV-2/human/USA/WA-UW-5717/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T C27630T G29553A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT412271 EPI_ISL_430914,2020-04-06,SARS-CoV-2/human/USA/WA-UW-5732/2020,United States / Washington ATTAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T C26907T G28079T T29867H C29870A -29904AA >MT412272 EPI_ISL_430915,2020-04-06,SARS-CoV-2/human/USA/WA-UW-5737/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C3037T T14104C C14408T C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT412273 EPI_ISL_430916,2020-04-07,SARS-CoV-2/human/USA/UNKNOWN-UW-5742/2020,United States ATTAAAGGTTTATACCTTCCCAG1- C36T C241T C1059T C3037T A12148T C13536T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412274 EPI_ISL_430917,2020-04-04,SARS-CoV-2/human/USA/CT-UW-5749/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AACC34TTTA C241T C3037T C10138T C14408T A23403G C25452T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412275 EPI_ISL_430918,2020-04-06,SARS-CoV-2/human/USA/WA-UW-5750/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T G1820A C5784T C8782T C17747T A17858G C18060T C20930T G26730A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412276 EPI_ISL_430919,2020-04-05,SARS-CoV-2/human/USA/CT-UW-5754/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACA1- A31T C36T C241T C1059T C2003T C3037T C11916T C14408T C18998T A23403G G25563T GC29540AT AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412277 EPI_ISL_430920,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5756/2020,United States / Washington ATTAAAGGTTTATACCTTC1- A31T AAC34TTT C241T C1059T C3037T C14408T G20134T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAA29881- >MT412278 EPI_ISL_430921,2020-04-06,SARS-CoV-2/human/USA/CT-UW-5757/2020,United States / Connecticut AT1GA A4T A31T AAC34TTT C241T C1059T C3037T C10851T C14408T G16975T A23403G G25563T >MT412279 EPI_ISL_430922,2020-04-05,SARS-CoV-2/human/USA/CT-UW-5763/2020,United States / Connecticut ATTAAA1- A31T C36T C241T C3037T C14235T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT412280 EPI_ISL_430923,2020-04-05,SARS-CoV-2/human/USA/CT-UW-5764/2020,United States / Connecticut ATTAAAGGT1- C36T C241T C1059T C3037T C14408T A23403G G25563T A29154T AAAAAAAAAAAAAAA29889- >MT412281 EPI_ISL_430924,2020-04-07,SARS-CoV-2/human/USA/UNKNOWN-UW-5769/2020,United States ATTAAAGGTTTATACCTTCCC1- A31T AAC34TTT TGGTCATGTTATGGT508- C8782T A10844G G15982T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412282 EPI_ISL_430925,2020-04-04,SARS-CoV-2/human/USA/CT-UW-5770/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTA1- C3037T C10138T C14408T A23403G C25452T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT412283 EPI_ISL_430926,2020-04-04,SARS-CoV-2/human/USA/CT-UW-5772/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C3037T T11879C C14408T C18877T A23403G G25563T C26681T TG29867AA C29870A -29904AAAAAAAAAAAAAA >MT412284 EPI_ISL_430927,2020-04-04,SARS-CoV-2/human/USA/CT-UW-5773/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1------------------------------TTT C36T C241T C1059T C3037T A6331G C10851T C14183T C14408T A23403G G25563T C29199T AAAA29900- >MT412285 EPI_ISL_430928,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5879/2020,United States / Washington ATTAAAGGTTTATACCTTC1- A31T C36T C241T C1059T T1117C C3037T C12880T C14408T A23403G G25563T G29553A GG29861AA G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412286 EPI_ISL_430929,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5884/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412287 EPI_ISL_430930,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5911/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C36T C241T C1059T C3037T C5974T C6040T C11036T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412288 EPI_ISL_430931,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5932/2020,United States / Washington ATTAAAGGTTTATACC1- A31T C36T C241T C1059T C3037T C13554T C14408T A23403G G25563T C27804T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412289 EPI_ISL_430932,2020-04-07,SARS-CoV-2/human/USA/WA-UW-5947/2020,United States / Washington ATTAAA1- A31T C36T C241T C1059T C3037T C4084T C14408T A23403G G25563T G29553A >MT412290 EPI_ISL_430933,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6162/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T G4148T C8782T C17747T A17858G C18060T TTA21991- T28144C -29904AAAA >MT412291 EPI_ISL_430934,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6164/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1-----------------------------------T C6627T C8782T C9474T C17747T A17858G C18060T G19340T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412292 EPI_ISL_430935,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6170/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1-----------------------------------T C241T C1059T C3037T C14408T A23403G G25563T G29553A G29868A C29870A -29904AAAAAAAAAAAAA >MT412293 EPI_ISL_430936,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6173/2020,United States / Washington ATTAAAGG1- A31T A34T C36T C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAA29891- >MT412294 EPI_ISL_430937,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6178/2020,United States / Washington ATTAAAGGT1- A31T C36T C241T G740A G872T C1059T C3037T C12880T C14408T A23403G G25563T G28899C G28985T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT412295 EPI_ISL_430938,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4226/2020,United States / Washington ATTAAAGGTTTATACCT1----------------G AAC34TTT C8782T C17747T A17858G C18060T T28144C G29864A TG29867AA C29870A >MT412296 EPI_ISL_430939,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4243/2020,United States / Washington ATTAAAGGTT1- C36T C1469T A6616G G11083T C14805T T17247C G26144T G29254T G29864A TG29867AA C29870A >MT412297 EPI_ISL_430940,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4255/2020,United States / Idaho ATTAAAGGTT1--------CC A31T AAC34TTT C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T G29868A C29870A >MT412298 EPI_ISL_430941,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4279/2020,United States / Washington ATTAAAG1- AAC34TTT C241T C1059T C3037T C6040T C14408T A23403G G25563T TG29867AA C29870A >MT412299 EPI_ISL_430942,2020-03-31,SARS-CoV-2/human/USA/ID-UW-4307/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACA1- A31T C36T C241T C1059T C3037T C13665T C14408T A16387T A23403G G25563T A26055G C28519T G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412300 EPI_ISL_430943,2020-03-30,SARS-CoV-2/human/USA/WA-UW-4338/2020,United States / Washington ATTAAA1- AAC34TTT C241T C1059T C1514T C3037T C14408T A23403G G25563T G29553A C29870A >MT412301 EPI_ISL_430944,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4343/2020,United States / Connecticut ATTAAAGGTTTATACC1- C36T C241T AAGTCATTT686- C1059T G2808A C3037T G3145T C14408T A23403G G25563T A26433G G29864A TG29867AA C29870A >MT412302 EPI_ISL_430945,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4345/2020,United States / Connecticut ATTAAAGGTTTATAC1- C241T C3037T C14408T A23403G T27560C GGG28881AAC G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAA >MT412303 EPI_ISL_430946,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4348/2020,United States / Connecticut ATTAAAGGTTT1- G23A C241T C3037T C13517T C14408T A23403G C25350T G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412304 EPI_ISL_430947,2020-03-27,SARS-CoV-2/human/USA/ID-UW-4354/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C28093T GG29861AA G29864A TG29867AA C29870A >MT412305 EPI_ISL_430948,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4383/2020,United States / Idaho C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C29870A -29904AAAAAAAAAAAAAAAAAA >MT412306 EPI_ISL_430949,2020-03-29,SARS-CoV-2/human/USA/ID-UW-4402/2020,United States / Idaho ATTAAA1- C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412307 EPI_ISL_430950,2020-03-29,SARS-CoV-2/human/USA/OR-UW-4410/2020,United States / Oregon ATTAAA1- A34H C36T C241T C3037T C7945T C10416T C14408T C18877T A23403G G25563T G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAA >MT412308 EPI_ISL_430951,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4413/2020,United States / Washington ATTAA1- C241T C1059T C3037T C14408T A23403G G25563T A29403G TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412309 EPI_ISL_430952,2020-03-28,SARS-CoV-2/human/USA/ID-UW-4418/2020,United States / Idaho ATT1- C36T C241T T833C C1059T C3037T C10440T A11425G C14408T A23403G G25563T C27964T >MT412310 ,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6183/2020,United States / WA ATTAAAGGTTTATACCTTCCCAGGTAAC1- AA30CT AAC34TTT C241T C1059T C3037T AACA8527TCAG A8535T A8699G T8701A G8706C T11809A C14408T A23403G G25563T >MT412311 EPI_ISL_430953,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6185/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A TG29867AA C29870A A29903- >MT412312 EPI_ISL_430954,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6186/2020,United States / Washington A1- C36T C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAA >MT412313 EPI_ISL_430955,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6211/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1-----------------------------------T C241T T833C C1059T C3037T C12915T C14408T C20178T A23403G G25563T G25644T C27498T C27964T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT412314 EPI_ISL_430957,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6240/2020,United States / Washington ATTAAA1- C36T C241T C1059T C3037T C14408T A23403G G25563T -29904AAAAAAAAAA >MT412315 EPI_ISL_430958,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6241/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T G7393T C14408T C15678T A23403G G24834A G25563T GG29861AA G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412316 EPI_ISL_430959,2020-04-02,SARS-CoV-2/human/USA/WA-UW-6243/2020,United States / Washington ATTAAAGGTTTA1- A31T C36T C241T C313T C3037T C3096T C14408T A23403G GGG28881AAC CAGTG29762- -29904AAAAAAAAAAAAAAAA >MT412317 EPI_ISL_430960,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6259/2020,United States / Connecticut ATTAAAGGTT1- C36T C241T C1059T C3037T C14408T C16173T A23403G G25563T AAAAAAAAAAA29893- >MT412318 EPI_ISL_430961,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6270/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T AACC34TTTA C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT412319 EPI_ISL_430962,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6271/2020,United States / Connecticut AT1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAA29881- >MT412320 EPI_ISL_430963,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6273/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C619T C1059T C3037T C11747T C14408T A14912G A23403G G25563T TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT412321 EPI_ISL_430964,2020-04-02,SARS-CoV-2/human/USA/WA-UW-6302/2020,United States / Washington AT1- C36T C241T C527T C1059T C3037T C6548T A11595G C14408T A23403G G24348T G25563T G29553A AAAAAAAAAAAAAAAAAA29886- >MT412322 EPI_ISL_430965,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6314/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T C1059T C3037T C12854T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412323 EPI_ISL_430966,2020-04-02,SARS-CoV-2/human/USA/WA-UW-6315/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGA1- C6568T C8067T C8782T A14604G C17747T A17858G C18060T C21911T G25835A T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412324 EPI_ISL_430967,2020-04-02,SARS-CoV-2/human/USA/WA-UW-6327/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1------------------------------T C36T C241T C1059T C3037T C5240G C14408T A23403G G25563T C26625T C29870A -29904AAAAAAAAAAA >MT412325 EPI_ISL_430968,2020-04-01,SARS-CoV-2/human/USA/WA-UW-6331/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTA C241T C1059T C3037T T5485G C14408T A23403G G25563T G29553A -29904AAAAAAAAAAAA >MT412326 EPI_ISL_430969,2020-04-02,SARS-CoV-2/human/USA/WA-UW-6335/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412327 EPI_ISL_430970,2020-04-01,SARS-CoV-2/human/USA/ID-UW-6349/2020,United States / Idaho A1- A4D C36T C241T T833C C1059T C3037T C11758T C14408T C14786T C15720T G21641T A23403G G25563T C27964T TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT412328 EPI_ISL_430971,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6362/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1-------------------------------TT C36T C241T C1059T C3037T C14408T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT412329 EPI_ISL_430972,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6380/2020,United States / Connecticut ATTAAAG1- AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412330 EPI_ISL_430973,2020-04-01,SARS-CoV-2/human/USA/CT-UW-6385/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T GTTATG515- C1059T A2018G C3037T C5622T C14408T T21995C A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412331 EPI_ISL_430974,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6399/2020,United States / Washington A1- C36T C241T C1059T C3037T C14408T A23403G G25563T G28881T AAAAAAAAAAAAAAAAAAAAAAAA29880- >MT412332 EPI_ISL_430975,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6400/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGT1- AACC34TTTA C241T C1059T C3037T C14408T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT412333 EPI_ISL_430976,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6403/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T C16750T A23403G G25563T G29553A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT412334 EPI_ISL_430977,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6404/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T C6255T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT412335 EPI_ISL_430978,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6408/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C241T C1059T C3037T C14408T T21146D TG22433AK G22436T C22439G CC22444AT A23403G G25563T G29553A -29904AAAAAA -29905A >MT412336 EPI_ISL_430979,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6410/2020,United States / Washington AT1-A A4T C36T C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT412337 EPI_ISL_430980,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6417/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1------------------------------TTT C36T C241T C1059T C3037T C6040T C9360T C11036T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT415320 ,2020-03-01,SARS-CoV-2/human/IND/OUMRK100/2020,India AT1- G9479K C15324T A15477G T21644C C24130T C29303T C29870A >MT415321 ,2020-03-11,SARS-CoV-2/human/IND/GMCKN318/2020,India C241T C3037T C14408T A23403G >MT415322 ,2020-03-16,SARS-CoV-2/human/IND/GMCKN443/2020,India ATTAAAGGTTT1- C1707Y C6312A G11083T C13730T C19524Y C23929T C28311T G29868R C29870A >MT415323 ,2020-03-20,SARS-CoV-2/human/IND/GMCTC469/2020,India ATTAAAGGTTTA1- C241T C3037T C14408T A23403G GGG28881AAC C29870M >MT415894 EPI_ISL_429969,2020-03-26,SARS-CoV-2/human/USA/VA-DCLS-0069/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C2416T C3037T T5338C C10712T C14408T A23403G G25563T C29870A >MT415895 EPI_ISL_429970,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0070/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- T490A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G >MT415896 EPI_ISL_429971,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0071/2020,United States / Virginia ATTAA1- T490A C3177T C5339T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT415897 EPI_ISL_429972,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0072/2020,United States / Virginia ATTA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872C- >MT415898 EPI_ISL_429973,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0073/2020,United States / Virginia ATT1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT415899 EPI_ISL_429974,2020-03-29,SARS-CoV-2/human/USA/VA-DCLS-0075/2020,United States / Virginia ATTAAA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT415900 EPI_ISL_429975,2020-03-27,SARS-CoV-2/human/USA/VA-DCLS-0076/2020,United States / Virginia ATTA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT415901 EPI_ISL_429976,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0077/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T C29870A >MT415902 EPI_ISL_429977,2020-03-27,SARS-CoV-2/human/USA/VA-DCLS-0078/2020,United States / Virginia ATTAAAGGTTTATACC1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT415903 EPI_ISL_429979,2020-03-26,SARS-CoV-2/human/USA/VA-DCLS-0080/2020,United States / Virginia C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T C29870M >MT415904 EPI_ISL_429980,2020-04-03,SARS-CoV-2/human/USA/VA-DCLS-0081/2020,United States / Virginia AT1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT415905 EPI_ISL_429982,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0084/2020,United States / Virginia ATTAAAGG1- C241T C1059T C3037T T3607C C8980T C14408T C14925T G18653T A23403G G25563T >MT415906 EPI_ISL_429983,2020-03-30,SARS-CoV-2/human/USA/VA-DCLS-0086/2020,United States / Virginia C241T C274A C2416T C3037T G4523A C10712T C14408T A23403G G25563T >MT415907 EPI_ISL_429984,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0087/2020,United States / Virginia ATT1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T C29870M >MT415908 EPI_ISL_429985,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0088/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT415909 EPI_ISL_429986,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0089/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C274A C2416T C3037T G4523A C10712T C14408T A23403G G25563T C29409T >MT415910 EPI_ISL_429987,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0090/2020,United States / Virginia ATTAAAGGTTTA1- C241T C2416T C3037T G4523A C10712T C14408T A23403G G25563T C29870A >MT415911 EPI_ISL_429988,2020-04-02,SARS-CoV-2/human/USA/VA-DCLS-0091/2020,United States / Virginia ATTAAAGGTT1- C241T C3037T C6070T C14408T C18877T A23403G C24023T G25563T C25603T >MT415912 EPI_ISL_429989,2020-04-01,SARS-CoV-2/human/USA/VA-DCLS-0092/2020,United States / Virginia ATTAAAGGTT1- C241T C1059T C3037T G14118T C14408T A23403G G25563T C29870A >MT418880 EPI_ISL_434590,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0095/2020,United States / Virginia ATTA1- T490A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G C29870A >MT418881 EPI_ISL_434592,2020-04-10,SARS-CoV-2/human/USA/VA-DCLS-0098/2020,United States / Virginia ATTA1- T490A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G C29870A >MT418882 EPI_ISL_434593,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0099/2020,United States / Virginia ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T C25919T C29870A >MT418883 EPI_ISL_434594,2020-04-10,SARS-CoV-2/human/USA/VA-DCLS-0100/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C7564T C8782T A13712G C17747T A17858G C18060T T28144C C29870A >MT418884 EPI_ISL_434595,2020-04-10,SARS-CoV-2/human/USA/VA-DCLS-0101/2020,United States / Virginia ATTAAAGGTT1- C7564T C8782T A13712G C17747T A17858G C18060T T28144C C29870A >MT418885 EPI_ISL_434596,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0104/2020,United States / Virginia ATTA1- C241T C1059T C3037T C14408T A23403G G25563T C25688A C29870A >MT418886 EPI_ISL_434597,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0105/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T G2447A C3037T C14408T A23403G G25563T C25688A AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT418887 EPI_ISL_434598,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0106/2020,United States / Virginia ATTAAA1- C241T C1059T G2447A C3037T C14408T A23403G G25563T C25688A G27420T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT418888 EPI_ISL_434600,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0108/2020,United States / Virginia AT1- C241T C1059T G2447A C3037T C14408T A23403G G25563T C25688A GGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29861- >MT418889 EPI_ISL_434601,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0109/2020,United States / Virginia ATTAAA1- C241T C1059T C2455T C3037T C11916T C13252T C14408T A23403G C23604T G25563T C29358T >MT418890 EPI_ISL_434602,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0110/2020,United States / Virginia ATTAAAGGTTTATAC1- C241T C1059T C3037T C5806T C9943T C11916T G13201T C13252T C14408T G20752A A23403G C23604T G25563T C29358T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT418891 EPI_ISL_434603,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0111/2020,United States / Virginia C241T C1059T C3037T C11916T C13252T C14408T A23403G C23604T G25563T C29358T >MT418892 EPI_ISL_434604,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0112/2020,United States / Virginia ATTAAAG1- C241T C1059T C3037T C5806T C9943T C11916T C13252T C14408T A23403G C23604T G25563T C29358T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT418893 EPI_ISL_434605,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0114/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C313T C3037T C14408T A23403G T28009G T28218C GGG28881AAC A29871M >MT418894 EPI_ISL_434606,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0115/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C3037T T9172C A10948G C13603M C14408T G19446K C21575T C21998T A23403G G26730T GGG28881AAC >MT419810 EPI_ISL_434541,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S1/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C8782T C17747T A17858G C18060T C18115T A24694T T28144C A29863G AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT419811 EPI_ISL_434542,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S2/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T C3927T C8782T C14408T C17678T A23403G G25563T C27944T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419812 EPI_ISL_434543,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S3/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C8782T C17747T A17858G C18060T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT419813 EPI_ISL_434544,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S4/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T C14408T G17064T A20778T GA20781TC AA20785TT C21658T A23403G ATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29677- >MT419814 EPI_ISL_434545,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S5/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T G7936T C14408T A23403G G25563T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419815 EPI_ISL_434546,2020-03-24,SARS-CoV2/human/USA/PR-CDC-S6/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C3037T C14408T A23403G GGG28881AAC ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419816 EPI_ISL_434547,2020-03-24,SARS-CoV2/human/USA/PR-CDC-S7/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- A8728G C8782T G17280T C17747T A17858G C18060T A24694T G25687T A25806T T28144C TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT419817 EPI_ISL_434548,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S8/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T C9679T C11916T C14408T C14554T C18998T A23403G C25380T G25563T ATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29677- >MT419818 EPI_ISL_434549,2020-03-23,SARS-CoV2/human/USA/PR-CDC-S9/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T C4113T C11916T C14408T C18998T A22278G A23403G G25563T G29540A ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419819 EPI_ISL_434550,2020-03-24,SARS-CoV2/human/USA/PR-CDC-S10/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T C14408T A23403G G25563T T27792A C27944T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419820 EPI_ISL_434551,2020-03-24,SARS-CoV2/human/USA/PR-CDC-S11/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T A1632T C3037T C14408T A23403G G25563T AAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29813- >MT419821 EPI_ISL_434552,2020-04-01,SARS-CoV2/human/USA/PR-CDC-S18/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T AC8663GT C14408T A23403G C25046T G25563T T27801A ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419822 EPI_ISL_434553,2020-04-01,SARS-CoV2/human/USA/PR-CDC-S19/2020,United States/Puerto_Rico ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGC1- C241T C1059T C3037T T8850C T10743G C14408T A23403G G25563T A27784G ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419827 EPI_ISL_417329,2020-03-04,SARS-CoV-2/human/USA/CA-CDPH-UC25/2020,United States / California / San Mateo County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAA1- G28178T G29711T ATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29815- >MT419828 EPI_ISL_417319,2020-03-05,SARS-CoV-2/human/USA/CA-SCCPHD-UC15/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGT1- A17725G T19169C C24989A A28117G G29711T ATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29815- >MT419829 EPI_ISL_413557,2020-02-28,SARS-CoV-2/human/USA/CA-CDPH-UC1/2020,United States / California / Sonoma County C5184T C8782T C17747T A17858G C18060T T28144C C29253T AGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29824- >MT419830 EPI_ISL_413559,2020-02-27,SARS-CoV-2/human/USA/CA-CDPH-UC3/2020,United States / California / Solano County C21T C9924T C9951T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT419831 EPI_ISL_413558,2020-02-27,SARS-CoV-2/human/USA/CA-CDPH-UC2/2020,United States / California / Solano County C9924T A15641C TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832CTG- >MT419832 EPI_ISL_413561,2020-02-27,SARS-CoV-2/human/USA/CA-CDPH-UC4/2020,United States / California / Solano County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C9924T >MT419833 EPI_ISL_413922,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC5/2020,United States / California / San Francisco G7798T C8782T C17747T A17858G C18060T C20148T T28144C CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT419834 EPI_ISL_413924,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC6/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAA1- G7798T C8782T C17747T A17858G C18060T C20148T T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT419835 EPI_ISL_413925,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC7/2020,United States / California / San Francisco A1G A3046G C8782T A16467G C17747T A17858G C18060T C23185T T28144C ATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29819- >MT419836 EPI_ISL_413926,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC8/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTA1- A3046G C8782T A16467G G16975T C17747T A17858G C18060T C23185T T28144C GGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29778- >MT419837 EPI_ISL_413928,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC9/2020,United States / California / San Francisco A3046G C8782T A16467G G16975T C17747T A17858G C18060T C23185T T28144C AAAAAAAAAAAAAAAAAA29886- >MT419838 EPI_ISL_413930,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC10/2020,United States / California / Grand Princess cruise ship ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCA1- C8782T A16467G C17747T A17858G C18060T A23014G C23185T T25468C T28144C ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT419839 EPI_ISL_413931,2020-03-05,SARS-CoV-2/human/USA/CA-CDPH-UC11/2020,United States / California / San Francisco A3046G C8782T A16467G G16975T C17747T A17858G C18060T C23185T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT419840 EPI_ISL_417316,2020-03-11,SARS-CoV-2/human/USA/CA-CDPH-UC12/2020,United States / California / San Mateo County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTG1- C2416T C3037T C14408T A23403G C25702T GCATACAAAACATTCCCACCAACAGAGCCTAAAAAGGACAAAAAGAAGAAGGCTGATGAAACTCAAGCCTTACCGCAGAGACAGAAGAAACAGCAAACTGTGACTCTTCTTCCTGCTGCAGATTTGGATGATTTCTCCAAACAATTGCAACAATCCATGAGCAGTGCTGACTCAACTCAGGCCTAAACTCATGCAGACCACACAAGGCAGATGGGCTATATAAACGTTTTCGCTTTTCCGTTTACGATATATAGTCTACTCTTGTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29348- >MT419841 EPI_ISL_417318,2020-02-29,SARS-CoV-2/human/USA/CA-SCCPHD-UC14/2020,United States / California / Santa Clara County G29711T ACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29723- >MT419842 EPI_ISL_417320,2020-03-04,SARS-CoV-2/human/USA/CA-SCCPHD-UC16/2020,United States / California / Santa Clara County C7815T G29711T AAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29796- >MT419843 EPI_ISL_417321,2020-03-08,SARS-CoV-2/human/USA/CA-SCCPHD-UC17/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCA1- G29711T CCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29732- >MT419844 EPI_ISL_417322,2020-03-04,SARS-CoV-2/human/USA/CA-CDPH-UC18/2020,United States / California / San Mateo County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAA1- G28178T G29711T AGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29782- >MT419845 EPI_ISL_417323,2020-03-04,SARS-CoV-2/human/USA/CA-CDPH-UC19/2020,United States / California / Marin County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAA1- C8782T C17747T A17858G C18060T T28144C AACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29767- >MT419846 EPI_ISL_417324,2020-03-04,SARS-CoV-2/human/USA/CA-CDPH-UC20/2020,United States / California / Solano County C8782T C16679T C17747T A17858G C18060T T28144C TCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29667- >MT419847 EPI_ISL_417325,2020-03-03,SARS-CoV-2/human/USA/CA-CDPH-UC21/2020,United States / California / Solano County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACT1- G16240A G21796A T21838C G29711T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT419848 EPI_ISL_417326,2020-03-04,SARS-CoV-2/human/USA/CA-CDPH-UC22/2020,United States / California / Marin County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTC1- C8782T C17747T C18060T T28144C AAAAAAAAAAAA29892- >MT419849 EPI_ISL_417327,2020-03-09,SARS-CoV-2/human/USA/CA-CDPH-UC23/2020,United States / California / San Joaquin County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTC1- C1627T C4776T C17747T A17858G C18060T T21522C G28086T T28144C GGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29794- >MT419850 EPI_ISL_417328,2020-03-07,SARS-CoV-2/human/USA/CA-CDPH-UC24/2020,United States / California / Sacramento County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C3037T C8389T C14408T A23403G G25563T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT419851 EPI_ISL_417330,2020-03-13,SARS-CoV-2/human/USA/CA-CDPH-UC26/2020,United States / California / San Francisco County C241T C1059T C3037T C14408T A23403G G25563T ATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29819- >MT419852 EPI_ISL_417331,2020-03-13,SARS-CoV-2/human/USA/CA-CDPH-UC27/2020,United States / California / San Francisco County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTACGTGGCTTTGGAGACTCCGTGGAGGAGGTCTTATCAGAGGCACGTCAACATCTTAAAGATGGCACTTGTGGCTTAGTAGAAGTTGAAAAAGGCGTTTTGCCTCAACTTGAACAGCCCTATGTGTTCATCAAACGTTCGGATGCTCGAACTG1- C1059T C3037T C11916T C13252T C14408T A23403G C23604T G25563T TGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29765- >MT419853 EPI_ISL_417332,2020-03-14,SARS-CoV-2/human/USA/CA-CDPH-UC28/2020,United States / California / San Francisco County C8782T C17747T A17858G C18060T G25337C T28144C TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT419854 EPI_ISL_417317,2020-03-02,SARS-CoV-2/human/USA/CA-SCCPHD-UC13/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- G29711T AAAAAAAA29896- >MT419855 EPI_ISL_429875,2020-03-02,SARS-CoV-2/human/USA/CA-CDPH-UC30/2020,United States / California / Grand Princess ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- A16467G C17747T C18060T G22139T C23185T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT419856 EPI_ISL_429877,2020-03-05,SARS-CoV-2/human/USA/CA-UCSF-UC32/2020,United States / California / San Francisco County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT419857 EPI_ISL_429878,2020-03-07,SARS-CoV-2/human/USA/CA-UCSF-UC33/2020,United States / California / San Francisco County ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT419858 EPI_ISL_429879,2020-03-05,SARS-CoV-2/human/USA/CA-SCCPHD-UC34/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- G29711T AAAAAAAAAAAAAAAAAAA29885- >MT419859 EPI_ISL_429880,2020-03-08,SARS-CoV-2/human/USA/CA-SCCPHD-UC35/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- G9653T C27493T G29711T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT419860 EPI_ISL_429881,2020-03-20,SARS-CoV-2/human/USA/CA-UCSF-UC36/2020,United States / California / San Francisco County ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT422806 EPI_ISL_447588,2020-03-27,SARS-CoV-2/human/USA/UF-4/2020,United States / FL C241T C1059T C3037T A4386G C10319T C14408T C22432T A23403G G25563T C27964T >MT422807 EPI_ISL_447589,2020-03-27,SARS-CoV-2/human/USA/UF-5/2020,United States / FL C241T C1059T C3037T A4386G C10319T C14408T A23403G G25563T C27964T >MT428551 EPI_ISL_435045,2020-03-22,SARS-CoV-2/human/KAZ/NCB-1/2020,Kazakhstan / Nur-Sultan C884T G1397A TTG3333- C4234T G8653T G11083T T16272G C17141A T28688C >MT428552 EPI_ISL_435046,2020-03-25,SARS-CoV-2/human/KAZ/NCB-2/2020,Kazakhstan / Nur-Sultan C241T C3037T C14408T A23403G A26530G G28857T >MT428553 EPI_ISL_435047,2020-03-25,SARS-CoV-2/human/KAZ/NCB-3/2020,Kazakhstan / Nur-Sultan C241T C3037T C14408T A18956G C19170T G19509A A23403G GGG28881AAC >MT428554 EPI_ISL_435048,2020-04-21,SARS-CoV-2/human/KAZ/NCB-5/2020,Kazakhstan / Nur-Sultan G2448A C8782T T9477A C14805T G25979T T28144C C28657T C28863T >MT429183 EPI_ISL_434607,2020-03-26,SARS-CoV-2/human/USA/WI-UW-261/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T T6814C G11083T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429184 EPI_ISL_434608,2020-04-10,SARS-CoV-2/human/USA/WI-UW-262/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429185 EPI_ISL_434609,2020-04-08,SARS-CoV-2/human/USA/WI-UW-263/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C10319T C14408T T16047C A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429186 EPI_ISL_434610,2020-04-12,SARS-CoV-2/human/USA/WI-UW-264/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T G17122T A23403G G25563T G26634T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429187 EPI_ISL_434611,2020-04-08,SARS-CoV-2/human/USA/WI-UW-265/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429188 EPI_ISL_434612,2020-04-07,SARS-CoV-2/human/USA/WI-UW-266/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C3811T G14692A G29711T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429189 EPI_ISL_434613,2020-04-08,SARS-CoV-2/human/USA/WI-UW-267/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429190 EPI_ISL_434614,2020-04-06,SARS-CoV-2/human/USA/WI-UW-268/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT429191 EPI_ISL_434615,2020-04-06,SARS-CoV-2/human/USA/WI-UW-269/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G1319A G2945A C3037T C8389T C10156T C14408T A23403G A23588T G25563T C27657T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT432195 EPI_ISL_435034,2020-04-09,SARS-CoV-2/human/USA/LA-EVTL01/2020,United States / Louisiana C241T C1059T C3037T C10319T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAA29881- >MT434757 EPI_ISL_436137,2020-04-21,SARS-CoV-2/human/IND/nimh-2873/2020,India ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C1281T C4158T C13730T C23929T T26382A G26467T C28311T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT434758 EPI_ISL_436138,2020-04-23,SARS-CoV-2/human/IND/nimh-3952/2020,India ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C3037T C3634T A3742G C14408T G16945A G20709T A23403G C23635T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT434759 EPI_ISL_436156,2020-04-17,SARS-CoV-2/human/IND/nimh-1596/2020,India ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C3176T C13730T C17403T A19422G C19524T C23929T G26467T C28311T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT434760 EPI_ISL_436157,2020-04-17,SARS-CoV-2/human/IND/nimh-1598/2020,India ATTAAAGGTTTATACCTTCCCAGGTAAC1- C3176T G7975T C13730T A15435G C17403T A19422G C19524T C23929T G26467T C28311T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT434782 EPI_ISL_436048,2020-03-05,SARS-CoV-2/human/USA/NY-CDC-SURV0076NYC/2020,United States / NY / NYC C241T C1059T C3037T C11916T C13536T C14408T C18998T A23403G G25563T A28989W G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434783 EPI_ISL_436052,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0165NYC/2020,United States / NY / NYC C1625T A10155R G11083T C12992T A13265T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434784 EPI_ISL_436053,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0166NYC/2020,United States / NY / NYC C1625T G11083T A13265T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434785 EPI_ISL_436064,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0397NYC/2020,United States / NY / NYC G11083T T17247C G24095T G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434786 EPI_ISL_436047,2020-03-04,SARS-CoV-2/human/USA/NY-CDC-SURV0052NYC/2020,United States / NY / NYC A6639G C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT434787 EPI_ISL_436049,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0097NYC/2020,United States / NY / NYC C1625T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434788 EPI_ISL_436051,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0162NYC/2020,United States / NY / NYC C241T C1059T C10851T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434789 EPI_ISL_436055,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0171NYC/2020,United States / NY / NYC C241T C2592A C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434790 EPI_ISL_436057,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0183NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434791 EPI_ISL_436058,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0186NYC/2020,United States / NY / NYC C241T C1059T C1917T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434792 EPI_ISL_436059,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0240NYC/2020,United States / NY / NYC C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434793 EPI_ISL_436060,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0302NYC/2020,United States / NY / NYC C241T C1059T C11916T C14408T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434794 EPI_ISL_436061,2020-03-08,SARS-CoV-2/human/USA/NY-CDC-SURV0319NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434795 EPI_ISL_436062,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0331NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434796 EPI_ISL_436063,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0334NYC/2020,United States / NY / NYC C241T C14408T A20268G A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT434797 EPI_ISL_436065,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0407NYC/2020,United States / NY / NYC C241T C1059T C14408T C16260T A23403G G25563T C28821A AAAAAAAAAAAAAAAAAAAAA29883- >MT434798 EPI_ISL_436066,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0440NYC/2020,United States / NY / NYC C241T C1059T C11916T C14408T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434799 EPI_ISL_436067,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0444NYC/2020,United States / NY / NYC C241T C1059T C14408T C21846T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434800 EPI_ISL_436068,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0472NYC/2020,United States / NY / NYC C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT434801 EPI_ISL_436069,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0475NYC/2020,United States / NY / NYC C241T C1059T C10851T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434802 EPI_ISL_436070,2020-03-13,SARS-CoV-2/human/USA/NY-CDC-SURV0495NYC/2020,United States / NY / NYC C241T C1059T T5698C C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434803 EPI_ISL_436071,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0513NYC/2020,United States / NY / NYC C241T C1059T G11291A C11916T C14408T C18998T A23403G G25563T C27011T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434804 EPI_ISL_436073,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0710NYC/2020,United States / NY / NYC C241T C1059T C14408T C16726T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434805 EPI_ISL_436074,2020-03-10,SARS-CoV-2/human/USA/NY-CDC-SURV0862NYC/2020,United States / NY / NYC C241T C1059T C11916T C14408T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434806 EPI_ISL_436075,2020-03-10,SARS-CoV-2/human/USA/NY-CDC-SURV0863NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434807 EPI_ISL_436076,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0874NYC/2020,United States / NY / NYC C5730T C14805T T17247C G18985T G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434808 EPI_ISL_436077,2020-03-19,SARS-CoV-2/human/USA/NY-CDC-SURV0982NYC/2020,United States / NY / NYC C241T C1059T C3037T C10015T C11916T C14408T C18744T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434809 EPI_ISL_436078,2020-03-19,SARS-CoV-2/human/USA/NY-CDC-SURV0983NYC/2020,United States / NY / NYC C241T C1059T C4113T C11916T C14408T C18998T A23403G G25563T G29540A AAAAAAAAAAAAAAAAAAAAA29883- >MT434810 EPI_ISL_436080,2020-03-18,SARS-CoV-2/human/USA/NY-CDC-SURV0988NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434811 EPI_ISL_436081,2020-03-17,SARS-CoV-2/human/USA/NY-CDC-SURV0996NYC/2020,United States / NY / NYC C241T C1059T C14408T T18632G A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434812 EPI_ISL_436082,2020-03-19,SARS-CoV-2/human/USA/NY-CDC-SURV1000NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434813 EPI_ISL_436050,2020-03-02,SARS-CoV-2/human/USA/NY-CDC-SURV0144NYC/2020,United States / NY / NYC A11217G C17440T G29711T AAAAAAAAAAAAAAAAAAAAA29883- >MT434814 EPI_ISL_436054,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0168NYC/2020,United States / NY / NYC C1625T G11083T A13265T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAA29883- >MT434815 EPI_ISL_436056,2020-03-09,SARS-CoV-2/human/USA/NY-CDC-SURV0175NYC/2020,United States / NY / NYC C241T C1059T C14408T A23403G G25563T C27549T GCAAACTGT29440- T29726W AAAAAAAAAAAAAAAAAAAAA29883- >MT434816 EPI_ISL_436072,2020-03-08,SARS-CoV-2/human/USA/NY-CDC-SURV0592NYC/2020,United States / NY / NYC C241T ATG518- C1059T C6578T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT434817 EPI_ISL_436079,2020-03-19,SARS-CoV-2/human/USA/NY-CDC-SURV0985NYC/2020,United States / NY / NYC C241T AAGTCATTT686- C1059T G2808A C14408T A23403G G25563T A26433G AAAAAAAAAAAAAAAAAAAAA29883- >MT435079 EPI_ISL_435049,2020-04-13,SARS-CoV-2/human/IND/GBRC2/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435080 EPI_ISL_435050,2020-04-13,SARS-CoV-2/human/IND/GBRC3/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C13994T A14041C C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435081 EPI_ISL_435051,2020-04-13,SARS-CoV-2/human/IND/GBRC4/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T C15371T A23403G G25563T G28221T G28371T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435082 EPI_ISL_435052,2020-04-13,SARS-CoV-2/human/IND/GBRC5/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T G3831C G6369A C14408T C17747T A23403G G25563T G28221T G28371T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435083 EPI_ISL_435053,2020-04-07,SARS-CoV-2/human/IND/GBRC6/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T G2249A C3037T T7022C C14408T G19872T T20063C A23403G C23638T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435084 EPI_ISL_435054,2020-04-14,SARS-CoV-2/human/IND/GBRC7/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435085 EPI_ISL_435055,2020-04-22,SARS-CoV-2/human/IND/GBRC8/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T G16078A C18877T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT435086 EPI_ISL_435056,2020-04-21,SARS-CoV-2/human/IND/GBRC9/2020,India / Gujarat / Mansa ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T G3955A G4866T C14408T C14425A A23403G G29540T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT438718 EPI_ISL_436641,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1000/2020,United States / California / San Francisco ATTAAAGGTTT1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT438719 EPI_ISL_436642,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1001/2020,United States / California / San Francisco ATTA1- T21434W A21436W C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438720 EPI_ISL_436643,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1002/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438721 EPI_ISL_436644,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1003/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438722 EPI_ISL_436645,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1004/2020,United States / California / San Francisco C25692T >MT438723 EPI_ISL_436646,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1005/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- T15867A C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438724 EPI_ISL_436647,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1006/2020,United States / California / San Francisco ATT1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438725 EPI_ISL_436648,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1007/2020,United States / California / San Francisco ATTAAAGGTTTAT1------------C G10617A C17977Y C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438726 EPI_ISL_436649,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1008/2020,United States / California / San Francisco ATTAAAGGTTTATACCTT1- T5313Y A13203G C25692T C26839T T27176W AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438727 EPI_ISL_436650,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1009/2020,United States / California / San Francisco ATTA1---T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438728 EPI_ISL_436651,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1010/2020,United States / California / San Francisco A1- C1878T C25692T >MT438729 EPI_ISL_436652,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1011/2020,United States / California / San Francisco ATTAAAGGTTT1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438730 EPI_ISL_436653,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1012/2020,United States / California / San Francisco C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT438731 EPI_ISL_436654,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1013/2020,United States / California / San Francisco ATTA1- T12910A C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438732 EPI_ISL_436655,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1014/2020,United States / California / San Francisco ATTA1- A14940G C24865T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438733 EPI_ISL_436656,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1015/2020,United States / California / San Francisco ATTAAAGGTTTAT1------------C C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438734 EPI_ISL_436657,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1016/2020,United States / California / San Francisco ATTAAAGGTTT1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438735 EPI_ISL_436658,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1017/2020,United States / California / San Francisco ATTAAAGGTTTA1- C18041Y C25692T G28916K AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438736 EPI_ISL_436659,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1018/2020,United States / California / San Francisco ATTAAAGGTTTAT1------------C C5812Y C6363T C20611T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438737 EPI_ISL_436660,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1019/2020,United States / California / San Francisco AT1- C5812T C6363T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438738 EPI_ISL_436661,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1020/2020,United States / California / San Francisco ATTAAAGGTTTA1- C6363T C25692T G28028T AAAAAAAAAAAAAAAAA29887- >MT438739 EPI_ISL_436662,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1021/2020,United States / California / San Francisco ATTA1- C6363T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438740 EPI_ISL_436663,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1022/2020,United States / California / San Francisco ATTAAAGGTTTA1- C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438741 EPI_ISL_436664,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1023/2020,United States / California / San Francisco ATTAAAGGTTTATAC1- C5812T C6363T C25692T >MT438742 EPI_ISL_436665,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1024/2020,United States / California / San Francisco C5812T C6363T C25692T >MT438743 EPI_ISL_436666,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1025/2020,United States / California / San Francisco A1- C5812T C6363T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT438744 EPI_ISL_436667,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1026/2020,United States / California / San Francisco ATTAAAGGTTT1- A301G G10617A G18379A C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438745 EPI_ISL_436668,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1027/2020,United States / California / San Francisco ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C2263A T4651G T5687Y A15604W C23591Y C24370T C25692T C26060T G29742T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438746 EPI_ISL_436669,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1028/2020,United States / California / San Francisco ATTA1- C25692T AAAAAAAAAAAAAA29890- >MT438747 EPI_ISL_436670,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1029/2020,United States / California / San Francisco ATTA1- C6363T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875C- >MT438748 EPI_ISL_436671,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1030/2020,United States / California / San Francisco A301G G10617A G18379A C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438749 EPI_ISL_436672,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1031/2020,United States / California / San Francisco ATTAAAGGTTTA1- C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438750 EPI_ISL_436673,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1032/2020,United States / California / San Francisco ATTAAAGGTTTA1- C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438751 EPI_ISL_436674,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1033/2020,United States / California / San Francisco ATT1- G319A C10277T G13723A >MT438752 EPI_ISL_436675,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1034/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C2574T T10129Y C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438753 EPI_ISL_436676,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1035/2020,United States / California / San Francisco C10277T C27500T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438754 EPI_ISL_436677,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1036/2020,United States / California / San Francisco A1- C10277T C27500T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438755 EPI_ISL_436678,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1037/2020,United States / California / San Francisco ATTAAAGGTTTAT1- C10188Y C10277T G13723A A15765C C20204T T21252Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438756 EPI_ISL_436679,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1038/2020,United States / California / San Francisco ATT1- C10277T C19881T A23796R >MT438757 EPI_ISL_436680,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1039/2020,United States / California / San Francisco C10277T G13723A AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438758 EPI_ISL_436681,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1040/2020,United States / California / San Francisco C10277T >MT438759 EPI_ISL_436682,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1041/2020,United States / California / San Francisco ATTAAAGGTTTATACCTT1- AAGTCATTT686- A6313G T7191C A7193G T8329Y T10129Y C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT438760 EPI_ISL_436683,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1042/2020,United States / California / San Francisco C2574T T5449C C10277T T14151C C29625T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT439230 EPI_ISL_436800,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20113/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C4002T C5175T G10097A C13536T C14408T A23403G C23731T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439231 EPI_ISL_436801,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20122/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T G3242K C14408T C18877T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439232 EPI_ISL_436802,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20129/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439233 EPI_ISL_436803,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20162/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439234 EPI_ISL_436804,2020-03-11,SARS-CoV-2/human/USA/MI-MDHHS-SC20189/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439235 EPI_ISL_436805,2020-03-11,SARS-CoV-2/human/USA/MI-MDHHS-SC20190/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C18877T A23403G G25563T TTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29822- >MT439236 EPI_ISL_436806,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20131/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T G11083T C14408T G20616T A23403G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT439237 EPI_ISL_436808,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20179/2020,United States / MI ATTAAAGGTT1- C241T C1059T C3037T A5011M T9046C C14408T T19584Y A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439238 EPI_ISL_436813,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20150/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1263A A2783W C3037T C3961T C14408T C23271T A23403G G25563T C25976A TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT439239 EPI_ISL_436807,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20169/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439240 EPI_ISL_436811,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20127/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T G27240K >MT439241 EPI_ISL_436809,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20100/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1912T C8782T G9177S G11548R C17747T A17858G C18060T C18167T C24082T T24212Y C24358M G25440K T28144C A29903- >MT439242 EPI_ISL_436815,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20130/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C16428T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439243 EPI_ISL_436810,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20120/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C12809T C14408T A23403G G25563T C26625T C27625Y TTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29816- >MT439244 EPI_ISL_436812,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20136/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C26060T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT439245 EPI_ISL_436814,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20158/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439246 EPI_ISL_436816,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20176/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G491K C1059T C1380T T1750Y C1986Y C2232Y A2697W C2708Y C3037T T3991Y G6220S C7594Y GT7629KK C7704Y G7798S T8161Y C9073Y A9285W A10904R G12802K C14408T G18186K T19344Y T21170K G22484R G22487R A23403G C24370Y G25563T C25771Y G29715K TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT439247 EPI_ISL_436818,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20147/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C26110Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439248 EPI_ISL_436817,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20143/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A3660R G7756T C14408T A23403G G25563T TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT439249 EPI_ISL_436820,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20139/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439250 EPI_ISL_436821,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20163/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439251 EPI_ISL_436827,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20171/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G C26801G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439252 EPI_ISL_436823,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20161/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747Y A17858G C18060T A24694T T28144C TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439253 EPI_ISL_436889,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20173/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439254 EPI_ISL_436824,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20175/2020,United States / MI ATTAAAGGTTTATACC1- C241T C1059T C3037T G3246T C14408T G15760A A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439255 EPI_ISL_436826,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20159/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C228T G1397A G3476A C5467T G9479T A9514G G11083T C25614T G26720C T28688C T28835C G29742T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439256 EPI_ISL_436825,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20156/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C10319T C14408T A23403G G25563T C27964T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439257 EPI_ISL_436828,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20112/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C G28077C T28144C C29230Y A29700G AAAAAA29898- >MT439258 EPI_ISL_436819,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20154/2020,United States / MI ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439259 EPI_ISL_436835,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20187/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAA29888- >MT439260 EPI_ISL_436830,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20153/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T C14408T T21616C A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439261 EPI_ISL_436838,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20117/2020,United States / MI ATTAAAGGTTTATACCTT1- C241T C1059T C3037T C10525T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439262 EPI_ISL_436841,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20149/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439263 EPI_ISL_436829,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20137/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439264 EPI_ISL_436832,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20118/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G T25557C G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439265 EPI_ISL_436822,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20110/2020,United States / MI ATTAAAGGTTTATACCTTCCCA1- C241T C1059T C3037T C14408T A23403G G25563T G25565R TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439266 EPI_ISL_436840,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20145/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C398T C8782T C17747T A17858G C18060T C25513T T28144C AAAAAAAAAA29894- >MT439267 EPI_ISL_436836,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20106/2020,United States / MI ATTAAAGGTTTA1- C241T C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439268 EPI_ISL_436831,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20107/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C3253T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439269 EPI_ISL_436837,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20108/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G21004T A23403G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439270 EPI_ISL_436843,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20183/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439271 EPI_ISL_436834,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20160/2020,United States / MI ATTAAAGGTTTATACC1- C241T C1059T C3037T T9370Y C14408T C18693Y A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439272 EPI_ISL_436839,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20126/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27847T C28754Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439273 EPI_ISL_436856,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20148/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A20268G A23403G C26313T C28863T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT439274 EPI_ISL_436848,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20119/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C28472A CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439275 EPI_ISL_436857,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20170/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C27847T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT439276 EPI_ISL_436846,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20111/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT439277 EPI_ISL_436860,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20182/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G22289K A23403G C27654Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT439278 EPI_ISL_436858,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20177/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T T21198W A23403G ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT439279 EPI_ISL_436852,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20134/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439280 EPI_ISL_436842,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20152/2020,United States / MI ATTAAAGGTTTATACC1- C241T C703T C1059T C3037T C14408T A23403G G25563T G26713T C27679Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439281 EPI_ISL_436844,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20186/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A2480G C2558T A4912C G11083T A14388R C14805T C17010A C21575T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439282 EPI_ISL_436833,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20132/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T177Y T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT439283 EPI_ISL_436853,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20138/2020,United States / MI ATTAAAGGTTTATACCT1- C241T C3037T C14408T A23403G T27299C GGG28881AAC T29148C TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT439284 EPI_ISL_436850,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20124/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T G16381A T17877C C22323Y G25500T C25854T T28144C G28878A G29742A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439285 EPI_ISL_436851,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20133/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C450Y C1059T C3037T C7594Y C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT439286 EPI_ISL_436849,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20121/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T G2591R A2730R C3037T C14408T A23403G G25563T C27847T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439287 EPI_ISL_436859,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20180/2020,United States / MI ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439288 EPI_ISL_436886,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20115/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C10525T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439289 EPI_ISL_436884,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20104/2020,United States / MI ATTAAAG1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT439290 EPI_ISL_436885,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20109/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C4891Y C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439291 EPI_ISL_436861,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20101/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439292 EPI_ISL_436864,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20174/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A5011M C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439293 EPI_ISL_436847,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20116/2020,United States / MI ATTAAAGGTTTATACCTTCC1- G713S C8782T C17010T C17747Y A17858G C18060T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439294 EPI_ISL_436888,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20172/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAA29891- >MT439295 EPI_ISL_436887,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20164/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C1059T C3037T C14408T A16668R A23403G G25563T C28826Y TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT439296 EPI_ISL_436855,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20142/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439297 EPI_ISL_436854,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20140/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T T6905G C14408T A23403G G25563T T29678Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT439298 EPI_ISL_436845,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20102/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T A7210G C14408T A23403G G25563T C27964T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT439299 EPI_ISL_436863,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20167/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT439300 EPI_ISL_436867,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20135/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2668Y C3037T C14408T A23403G G25563T C26750Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439301 EPI_ISL_436862,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20128/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT439302 EPI_ISL_436865,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20181/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T C8782T T18736C C24034T T25709Y T26729C G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439303 EPI_ISL_436868,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20157/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439304 EPI_ISL_436873,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20141/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT439305 EPI_ISL_436866,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20114/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT439306 EPI_ISL_436881,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20185/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T9385K C14408T A21345W A23403G G25563T T28360Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT439307 EPI_ISL_436874,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20144/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T G1820R C3037T A5209R C14408T G16852K A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439308 EPI_ISL_436872,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20125/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T G20167C C21242S A23403G G25563T C27847T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439309 EPI_ISL_436890,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20184/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C27847T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439310 EPI_ISL_436870,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20188/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T12433Y G13897K C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439311 EPI_ISL_436878,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20165/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGG1- C241T C1059T C3037T C14408T A23403G G25563T T27384Y AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439312 EPI_ISL_436875,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20146/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- C241T C1059T C3037T C3317T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439313 EPI_ISL_436871,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20123/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T T19395Y A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT439314 EPI_ISL_436880,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20178/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G960A C1059T C3037T C4202T C14408T A23403G G25563T A28032R AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439315 EPI_ISL_436877,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20155/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439316 EPI_ISL_436876,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20151/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T C14408T C19854T A23403G G25563T C27964T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439317 EPI_ISL_436869,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20166/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C6573T C14408T A23403G C25528T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT439318 EPI_ISL_436879,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20168/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C19421Y A23403G T24832C G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT439319 EPI_ISL_436882,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20105/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A5011M C12119Y C14408T A23403G G25563T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT439320 EPI_ISL_436883,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20103/2020,United States / MI ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T C14408T A23403G G25563T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT439595 EPI_ISL_436140,2020-04-24,SARS-CoV-2/human/IND/nimh-4376/2020,India / Karnataka ATTAAAGGTTTATACCTTCCCAGGTAACA1- C241T C3037T C3634T A3742G C14408T A15435G G16945A A23403G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT439596 EPI_ISL_436141,2020-04-24,SARS-CoV-2/human/IND/nimh-4378/2020,India / Karnataka ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C3037T C3634T A3742G C14408T G16945A A23403G G26467T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT439597 EPI_ISL_436139,2020-04-23,SARS-CoV-2/human/IND/nimh-3970/2020,India / Karnataka ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C3037T C3634T A3742G C14408T A15435G G16945A A23403G C25584T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT444148 ,2020-03-11,SARS-CoV-2/human/USA/CA-NHRC-01/2020,United States / CA ATTAAAGGTTTAT1- C8782T C17747T A17858G C18060T A24694T T28144C >MT444515 EPI_ISL_430019,2020-03-16,SARS-CoV-2/human/USA/UT-00066/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444516 EPI_ISL_430020,2020-03-16,SARS-CoV-2/human/USA/UT-00067/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444517 EPI_ISL_430021,2020-03-16,SARS-CoV-2/human/USA/UT-00069/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C14786T A23403G GGG28881AAC T29816C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444518 EPI_ISL_430022,2020-03-16,SARS-CoV-2/human/USA/UT-00070/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444519 EPI_ISL_430023,2020-03-16,SARS-CoV-2/human/USA/UT-00071/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444520 EPI_ISL_430024,2020-03-16,SARS-CoV-2/human/USA/UT-00072/2020,United States / Utah ATTA1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444521 EPI_ISL_430025,2020-03-17,SARS-CoV-2/human/USA/UT-00074/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444522 EPI_ISL_430026,2020-03-16,SARS-CoV-2/human/USA/UT-00075/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444523 EPI_ISL_430028,2020-03-17,SARS-CoV-2/human/USA/UT-00077/2020,United States / Utah ATTAAAGGTTT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T G29692T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444524 EPI_ISL_430029,2020-03-15,SARS-CoV-2/human/USA/UT-00078/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444525 EPI_ISL_430030,2020-03-16,SARS-CoV-2/human/USA/UT-00079/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444526 EPI_ISL_430031,2020-03-15,SARS-CoV-2/human/USA/UT-00080/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T A2018G C3037T C14408T A18009G T21995C A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444527 EPI_ISL_430032,2020-03-17,SARS-CoV-2/human/USA/UT-00083/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- G11083T C14805T C18086T G26144T G28842T A29052T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444528 EPI_ISL_430033,2020-03-17,SARS-CoV-2/human/USA/UT-00084/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A20268G A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444529 EPI_ISL_430034,2020-03-17,SARS-CoV-2/human/USA/UT-00085/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C13019T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444530 EPI_ISL_430035,2020-03-15,SARS-CoV-2/human/USA/UT-00097/2020,United States / Utah ATTAAAGGTTTATAC1- C241T C1059T C3037T C14408T C17639T A23403G G25563T G25644A TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT444531 EPI_ISL_430036,2020-03-14,SARS-CoV-2/human/USA/UT-00098/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444532 EPI_ISL_430037,2020-03-14,SARS-CoV-2/human/USA/UT-00099/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C14408T C17410T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444533 EPI_ISL_430038,2020-03-15,SARS-CoV-2/human/USA/UT-00100/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C3037T C14408T A23403G ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT444534 EPI_ISL_430039,2020-03-30,SARS-CoV-2/human/USA/UT-00370/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T C21811T A23403G C26256T C29668T >MT444535 EPI_ISL_430040,2020-03-31,SARS-CoV-2/human/USA/UT-00442/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444536 EPI_ISL_430041,2020-03-30,SARS-CoV-2/human/USA/UT-00443/2020,United States / Utah ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T >MT444537 EPI_ISL_430042,2020-03-30,SARS-CoV-2/human/USA/UT-00444/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444538 EPI_ISL_430043,2020-03-30,SARS-CoV-2/human/USA/UT-00445/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27964T >MT444539 EPI_ISL_430044,2020-03-30,SARS-CoV-2/human/USA/UT-00446/2020,United States / Utah ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T >MT444540 EPI_ISL_430045,2020-03-31,SARS-CoV-2/human/USA/UT-00447/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T C17639T G18105T A20268G A23403G A28222G >MT444541 EPI_ISL_430046,2020-04-02,SARS-CoV-2/human/USA/UT-00491/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G >MT444542 EPI_ISL_430047,2020-04-02,SARS-CoV-2/human/USA/UT-00492/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G >MT444543 EPI_ISL_430048,2020-04-02,SARS-CoV-2/human/USA/UT-00495/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G C24378T G25563T C27964T >MT444544 EPI_ISL_430049,2020-04-02,SARS-CoV-2/human/USA/UT-00498/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T C14408T A23403G G25552T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444545 EPI_ISL_430050,2020-03-31,SARS-CoV-2/human/USA/UT-00500/2020,United States / Utah ATTA1- C241T C1059T C3037T T3508C C14408T T16993C C21707T A23403G G25563T G26589T C27964T >MT444546 EPI_ISL_430051,2020-04-02,SARS-CoV-2/human/USA/UT-00501/2020,United States / Utah ATTAAAGGTTTA1- C241T C3037T C5184T C10301A C14408T A23403G G26049T C26256T C29668T >MT444547 EPI_ISL_430052,2020-04-03,SARS-CoV-2/human/USA/UT-00502/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C2416T C3037T C14408T A23403G G25563T >MT444548 EPI_ISL_430053,2020-04-02,SARS-CoV-2/human/USA/UT-00503/2020,United States / Utah ATTAAAGGTTTATACCTTCCCA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444549 EPI_ISL_430054,2020-04-02,SARS-CoV-2/human/USA/UT-00506/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444550 EPI_ISL_430055,2020-04-02,SARS-CoV-2/human/USA/UT-00507/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444551 EPI_ISL_430057,2020-04-03,SARS-CoV-2/human/USA/UT-00510/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C9967T C14408T A23403G C26256T C29668T >MT444552 EPI_ISL_430058,2020-04-03,SARS-CoV-2/human/USA/UT-00511/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T8335C C9967T C14408T A23403G C26256T C29668T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT444553 EPI_ISL_430059,2020-04-03,SARS-CoV-2/human/USA/UT-00513/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C9491T C14408T A23403G A25048T G29778T >MT444554 EPI_ISL_430061,2020-04-03,SARS-CoV-2/human/USA/UT-00519/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444555 EPI_ISL_430062,2020-04-03,SARS-CoV-2/human/USA/UT-00520/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T G6446A A8031G C11919T C14408T C21998T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT444556 EPI_ISL_435348,2020-03-14,SARS-CoV-2/human/USA/UT-00092/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A23403G T29804A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444557 ,2020-03-15,SARS-CoV-2/human/USA/UT-00093/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C3037T A23403G T24436C G28569C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444559 EPI_ISL_435349,2020-03-14,SARS-CoV-2/human/USA/UT-00096/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C8782T C13506T C17747T A17858G C18060T T28144C CTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29666- >MT444560 ,2020-03-12,SARS-CoV-2/human/USA/UT-00105/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T G15734C A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444561 EPI_ISL_435350,2020-03-12,SARS-CoV-2/human/USA/UT-00106/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGG1- C241T C1059T C3037T C14408T G15760A A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT444562 EPI_ISL_435351,2020-03-12,SARS-CoV-2/human/USA/UT-00107/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C8782T C17747T A17858G C18060T C21058T A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444563 EPI_ISL_435352,2020-03-12,SARS-CoV-2/human/USA/UT-00108/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C8782T C17747T A17858G C18060T A24694T T28144C TCACCGAGGCCACGCGGAG29729- CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444564 EPI_ISL_435353,2020-03-27,SARS-CoV-2/human/USA/UT-00353/2020,United States / Utah ATTAAAGGTTT1- C241T C1059T C3037T T11131A C14408T A23403G C24378T G25563T C27964T >MT444565 EPI_ISL_435354,2020-03-28,SARS-CoV-2/human/USA/UT-00366/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- C241T C3037T T10311A C14408T A23403G TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444566 EPI_ISL_435355,2020-03-28,SARS-CoV-2/human/USA/UT-00367/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444567 EPI_ISL_435356,2020-03-29,SARS-CoV-2/human/USA/UT-00368/2020,United States / Utah ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T C28099T C28873T >MT444568 EPI_ISL_435357,2020-03-28,SARS-CoV-2/human/USA/UT-00369/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444569 EPI_ISL_435358,2020-04-03,SARS-CoV-2/human/USA/UT-00521/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444570 EPI_ISL_435359,2020-04-03,SARS-CoV-2/human/USA/UT-00522/2020,United States / Utah ATTAAAGGTTTA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444571 EPI_ISL_435360,2020-04-03,SARS-CoV-2/human/USA/UT-00524/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C11919T C14408T C20951T C21998T A23403G G25563T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT444572 EPI_ISL_435362,2020-04-03,SARS-CoV-2/human/USA/UT-00526/2020,United States / Utah ATTAAAGGTTTATACCT1- C241T C1059T C3037T C11919T C14408T C19264T C21998T A23403G G25563T >MT444573 EPI_ISL_435363,2020-04-03,SARS-CoV-2/human/USA/UT-00527/2020,United States / Utah ATTAAAG1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444574 EPI_ISL_435364,2020-04-03,SARS-CoV-2/human/USA/UT-00529/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T3313C C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444575 EPI_ISL_435365,2020-04-03,SARS-CoV-2/human/USA/UT-00531/2020,United States / Utah ATTAAAGGTTT1- C241T C1059T C3037T C5184T C11919T C14408T A23403G G25563T C26256T C29668T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT444576 EPI_ISL_435366,2020-04-03,SARS-CoV-2/human/USA/UT-00532/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1059T C3037T C14408T A23403G G25563T >MT444577 EPI_ISL_435368,2020-04-02,SARS-CoV-2/human/USA/UT-00534/2020,United States / Utah ATTAAAGGTT1- C241T C1059T C3037T T3508C C14408T C19264T A23403G G25563T C27964T >MT444578 EPI_ISL_435369,2020-04-03,SARS-CoV-2/human/USA/UT-00535/2020,United States / Utah ATTAA1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444579 EPI_ISL_435370,2020-04-04,SARS-CoV-2/human/USA/UT-00536/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T GAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29779- >MT444580 EPI_ISL_435371,2020-04-04,SARS-CoV-2/human/USA/UT-00537/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T T3313C C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444581 EPI_ISL_435372,2020-04-02,SARS-CoV-2/human/USA/UT-00539/2020,United States / Utah ATTAAAGG1- C241T C3037T C5184T C14408T A23403G C26256T C29668T >MT444582 EPI_ISL_435373,2020-04-02,SARS-CoV-2/human/USA/UT-00540/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T >MT444583 EPI_ISL_435374,2020-03-31,SARS-CoV-2/human/USA/UT-00541/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444584 EPI_ISL_435375,2020-04-02,SARS-CoV-2/human/USA/UT-00542/2020,United States / Utah ATTAAAGGTTTATACCTTCCCA1- C241T C1059T C3037T C14408T A23403G G25563T C27294T >MT444585 EPI_ISL_435376,2020-04-02,SARS-CoV-2/human/USA/UT-00543/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T A23403G G25563T C27294T >MT444586 EPI_ISL_435377,2020-04-02,SARS-CoV-2/human/USA/UT-00544/2020,United States / Utah ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25563T C27294T >MT444587 EPI_ISL_435378,2020-04-02,SARS-CoV-2/human/USA/UT-00545/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444588 ,2020-04-05,SARS-CoV-2/human/USA/UT-00677/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C9491T C14408T C17012T C21998T A23403G G25563T TCTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29665- >MT444589 EPI_ISL_435379,2020-04-05,SARS-CoV-2/human/USA/UT-00678/2020,United States / Utah ATTAAAGGTTTATACCT1- C241T C1059T A2018G C3037T C14408T C18029T A23403G G25563T G28373T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT444590 EPI_ISL_435380,2020-04-05,SARS-CoV-2/human/USA/UT-00679/2020,United States / Utah AT1- C8782T C17747T A17858G C18060T T28144C G28237T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT444591 EPI_ISL_435381,2020-04-06,SARS-CoV-2/human/USA/UT-00680/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C2416T C3037T C3159A G11083T C14408T A23403G G25563T C29614T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT444592 EPI_ISL_435384,2020-04-06,SARS-CoV-2/human/USA/UT-00883/2020,United States / Utah ATTAAAGGTTT1- C241T C3037T C14408T A23403G >MT444593 EPI_ISL_435385,2020-04-06,SARS-CoV-2/human/USA/UT-00884/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C11919T C14184T C14408T C17285T C21998T A23403G G25563T C28767T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444594 EPI_ISL_435386,2020-04-05,SARS-CoV-2/human/USA/UT-00885/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444595 EPI_ISL_435387,2020-04-06,SARS-CoV-2/human/USA/UT-00886/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444596 EPI_ISL_435388,2020-04-05,SARS-CoV-2/human/USA/UT-00887/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444597 EPI_ISL_435389,2020-04-06,SARS-CoV-2/human/USA/UT-00888/2020,United States / Utah ATTAAAGGTTT1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T >MT444598 EPI_ISL_435391,2020-04-05,SARS-CoV-2/human/USA/UT-00894/2020,United States / Utah ATTAA1- C241T C3037T C14408T C17639T G18105T A20268G A23403G A28222G >MT444599 EPI_ISL_435392,2020-04-07,SARS-CoV-2/human/USA/UT-00895/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT444600 EPI_ISL_435393,2020-04-07,SARS-CoV-2/human/USA/UT-00896/2020,United States / Utah ATTAAA1- C241T C3037T A6512C T13569A C14408T C18877T A23403G G25563T >MT444601 EPI_ISL_436901,2020-04-07,SARS-CoV-2/human/USA/UT-00899/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T T833C C1059T C3037T C14408T C21762T A22320G A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444602 EPI_ISL_436902,2020-04-08,SARS-CoV-2/human/USA/UT-00971/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T T833C C1059T C3037T C14408T A22320G A23403G G25563T C27964T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT444603 EPI_ISL_436903,2020-04-07,SARS-CoV-2/human/USA/UT-01216/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444604 EPI_ISL_436904,2020-04-06,SARS-CoV-2/human/USA/UT-01217/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C11919T C14408T C21998T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444605 EPI_ISL_436905,2020-04-07,SARS-CoV-2/human/USA/UT-01218/2020,United States / Utah ATTA1- C241T C3037T C14408T G18859T A23403G GGG28881AAC >MT444606 EPI_ISL_436906,2020-04-08,SARS-CoV-2/human/USA/UT-01220/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T A6512C C14408T C18877T A23403G G25563T >MT444607 EPI_ISL_436907,2020-04-08,SARS-CoV-2/human/USA/UT-01222/2020,United States / Utah ATTA1- C8782T C17747T A17858G C18060T T23287C A24694T G26227A T28144C >MT444608 EPI_ISL_436908,2020-04-08,SARS-CoV-2/human/USA/UT-01223/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C5184T C14408T A23403G C26256T C29668T >MT444609 EPI_ISL_436911,2020-04-08,SARS-CoV-2/human/USA/UT-01227/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C3037T C4540T G4904T G5206T C14408T A23403G C24138T C25350T G25654T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT444610 EPI_ISL_436912,2020-04-08,SARS-CoV-2/human/USA/UT-01229/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT444611 EPI_ISL_436913,2020-04-08,SARS-CoV-2/human/USA/UT-01231/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T C14408T A23403G C29870A >MT444612 EPI_ISL_436914,2020-04-09,SARS-CoV-2/human/USA/UT-01434/2020,United States / Utah ATTAAAGGTT1- C241T C1059T C3037T A7870G C14408T C14818T A23403G G25563T C27964T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT444613 EPI_ISL_436915,2020-04-10,SARS-CoV-2/human/USA/UT-01435/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT444614 EPI_ISL_436916,2020-04-10,SARS-CoV-2/human/USA/UT-01436/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27294T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444615 EPI_ISL_436917,2020-04-10,SARS-CoV-2/human/USA/UT-01437/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C21952T A23403G G25563T >MT444616 EPI_ISL_436918,2020-04-15,SARS-CoV-2/human/USA/UT-02218/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C683T G1495T C3037T A6512C C14408T C18877T A23403G G25563T T28208C GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT444617 EPI_ISL_436919,2020-04-15,SARS-CoV-2/human/USA/UT-02219/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T A2018G C2445T C3037T C14408T C18029T G20890A A23403G G25563T G25947T GG28373TT CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT444618 EPI_ISL_436920,2020-04-15,SARS-CoV-2/human/USA/UT-02220/2020,United States / Utah ATTAAAGGTT1- C241T C3037T A6512C C14408T C18877T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT444619 EPI_ISL_436921,2020-04-14,SARS-CoV-2/human/USA/UT-02221/2020,United States / Utah C241T T833C C1059T C3037T C14408T A22320G A23403G G25563T C27964T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT444620 EPI_ISL_436922,2020-04-15,SARS-CoV-2/human/USA/UT-02222/2020,United States / Utah ATTAAAGGTTTATACCT1- C241T C3037T C5184T C14408T A22534G A23403G C26256T C29668T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444621 EPI_ISL_436923,2020-04-15,SARS-CoV-2/human/USA/UT-02223/2020,United States / Utah ATTA1- C241T C3037T C5184T C14408T A22534G A23403G C26256T C29668T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT444622 EPI_ISL_436924,2020-04-15,SARS-CoV-2/human/USA/UT-02224/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C5184T C14408T A23403G C26256T C29668T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT444623 EPI_ISL_436925,2020-04-14,SARS-CoV-2/human/USA/UT-02227/2020,United States / Utah C241T T833C C1059T C3037T C14408T A22320G A23403G G25563T C27964T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT444624 EPI_ISL_436926,2020-04-15,SARS-CoV-2/human/USA/UT-02228/2020,United States / Utah AT1- C241T C2939T C3037T C14408T C15857T A23403G G24197T G28882T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444625 EPI_ISL_436927,2020-04-15,SARS-CoV-2/human/USA/UT-02229/2020,United States / Utah ATTA1- C241T C3037T A6512C C14408T C18877T A23403G G25563T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444626 EPI_ISL_436928,2020-04-15,SARS-CoV-2/human/USA/UT-02231/2020,United States / Utah ATTAAAGGTT1- C241T C1059T A2018G C2445T C3037T C14408T C18029T G20890A A23403G G25563T G25947T GG28373TT TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444627 EPI_ISL_436929,2020-04-14,SARS-CoV-2/human/USA/UT-02232/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T A6512C C14408T C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444628 EPI_ISL_436930,2020-04-15,SARS-CoV-2/human/USA/UT-02233/2020,United States / Utah AT1- C241T T833C C1059T C3037T C7528T C14408T A22320G A23403G G25563T C27964T TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT444629 EPI_ISL_436931,2020-04-14,SARS-CoV-2/human/USA/UT-02234/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C27964T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444630 EPI_ISL_436932,2020-04-15,SARS-CoV-2/human/USA/UT-02235/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C5184T C5812T C14408T A23403G C26256T C29668T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT444631 EPI_ISL_436933,2020-04-14,SARS-CoV-2/human/USA/UT-02242/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C3602T A13901G C14408T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT444632 EPI_ISL_436934,2020-04-15,SARS-CoV-2/human/USA/UT-02243/2020,United States / Utah ATTAAAGGTTTA1- C241T C3037T C5184T C5986T C14408T A23403G C26256T C29668T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444633 EPI_ISL_436935,2020-04-14,SARS-CoV-2/human/USA/UT-02244/2020,United States / Utah AT1- C241T C3037T C5184T C14408T A23403G C26256T C29668T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT444634 EPI_ISL_436936,2020-04-15,SARS-CoV-2/human/USA/UT-02245/2020,United States / Utah ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T T422C C1059T C3037T C14408T A23403G C24378T G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT444635 EPI_ISL_436938,2020-04-15,SARS-CoV-2/human/USA/UT-02247/2020,United States / Utah ATT1- C241T C3037T C5184T C14408T A23403G C26256T C29668T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT446312 EPI_ISL_444273,2020-02-05,SARS-CoV-2/human/Guangzhou/IQTC05/2020,China / Guangdong / Guangzhou AT1- G6819T T6996C C14235T C17373T G29527A AAAAAAAAAAAAAAAAAAAAAA29882- >MT446339 ,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-096/2020,United States / LA / MARINGOUIN ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10188T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446340 EPI_ISL_436940,2020-04-08,SARS-CoV-2/human/USA/LA-BIE-072/2020,United States / LA / KENNER ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C14408T G18281T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446341 EPI_ISL_436941,2020-04-08,SARS-CoV-2/human/USA/LA-BIE-073/2020,United States / LA / KILLONA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C10188T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446342 EPI_ISL_436942,2020-04-08,SARS-CoV-2/human/USA/LA-BIE-074/2020,United States / LA / SAINT ROSE ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10319T C14408T C16694T G21724T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446343 EPI_ISL_436943,2020-04-04,SARS-CoV-2/human/USA/LA-BIE-075/2020,United States / LA / NEW ORLEANS ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C1225T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446344 EPI_ISL_436944,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-076/2020,United States / LA / LOCKPORT ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446345 EPI_ISL_436945,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-077/2020,United States / LA / NEW ORLEANS ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T C25708T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446346 EPI_ISL_436946,2020-04-07,SARS-CoV-2/human/USA/LA-BIE-078/2020,United States / LA / LULING ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446347 EPI_ISL_436947,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-079/2020,United States / LA / RACELAND ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446348 EPI_ISL_436948,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-080/2020,United States / LA / NEW ORLEANS ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T A12082G C14408T A23403G G25563T T26320C C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446349 EPI_ISL_436949,2020-04-04,SARS-CoV-2/human/USA/LA-BIE-081/2020,United States / LA / KENNER ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446350 EPI_ISL_436950,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-082/2020',United States / LA / NEW ORLEANS ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C2652T C3037T C10319T C14408T A23403G G25563T C27964T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT446351 EPI_ISL_436951,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-083/2020,United States / LA / GRAY ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTAC1- C1059T C3037T T4462C A8913T C10319T G14268C C14408T A23403G T24982C C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446352 EPI_ISL_436952,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-084/2020,United States / LA / GHEENS ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10319T A12820G C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446353 EPI_ISL_436953,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-085/2020,United States / LA / THIBODAUX ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C364T C1059T C3037T C10319T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446354 EPI_ISL_436954,2020-04-09,SARS-CoV-2/human/USA/LA-BIE-086/2020,United States / LA / MARINGOUIN ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446355 EPI_ISL_436955,2020-04-08,SARS-CoV-2/human/USA/LA-BIE-087/2020,United States / LA / SLIDELL ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C1722T C3037T C10319T C14408T A22379G A23403G G25563T C27964T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT446356 EPI_ISL_436956,2020-04-03,SARS-CoV-2/human/USA/LA-BIE-088/2020,United States / LA / LACOMBE ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T C10319T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446357 EPI_ISL_436957,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-089/2020,United States / LA / HOUMA ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T C1059T C3037T A4220G C10188T C14408T A23403G T24982C G25563T G27478T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446358 EPI_ISL_436958,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-090/2020,United States / LA / RACELAND ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T C10188T C14408T A23403G T24982C G25563T G27461T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446359 EPI_ISL_436959,2020-04-05,SARS-CoV-2/human/USA/LA-BIE-092/2020,United States / LA / SLIDELL ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCT1- C241T C1059T C3037T G8867A C10319T A11268G C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446360 EPI_ISL_436960,2020-04-05,SARS-CoV-2/human/USA/LA-BIE-093/2020,United States / LA / SLIDELL ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTAC1- C1059T C3037T C10319T C14408T C14925T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT446361 EPI_ISL_436961,2020-04-06,SARS-CoV-2/human/USA/LA-BIE-094/2020,United States / LA / DELACROIX ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACAGGTTCGCGACGTGCTCGTA1- C1059T C3037T C10319T C14408T C16265T A23403G G24926T G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT447154 EPI_ISL_437624,2020-02-01,SARS-CoV-2/human/THA/SI200893-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C1150T G26144T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT447155 EPI_ISL_437623,2020-01-08,SARS-CoV-2/human/THA/SI200040-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT447156 EPI_ISL_437622,2020-01-23,SARS-CoV-2/human/THA/SI200383-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- G26144T T27285C TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT447157 EPI_ISL_437621,2020-01-25,SARS-CoV-2/human/THA/SI200433-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT447158 EPI_ISL_437620,2020-01-25,SARS-CoV-2/human/THA/SI200468-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C2942T G4390T C8782T T28144C AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT447159 EPI_ISL_437619,2020-01-26,SARS-CoV-2/human/THA/SI200478-NST/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C9996T G26144T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT447160 EPI_ISL_437618,2020-01-29,SARS-CoV-2/human/THA/SI200615-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- G2117T C2915A G15327T G25217T GAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29745- >MT447161 EPI_ISL_437617,2020-02-03,SARS-CoV-2/human/THA/SI201712-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- G26144T C29774T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT447162 EPI_ISL_437616,2020-02-07,SARS-CoV-2/human/THA/SI202205-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C8782T G17814T T28144C C29095T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT447163 EPI_ISL_437615,2020-02-22,SARS-CoV-2/human/THA/SI202620-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C2942T G4390T C8782T G20134T G24047A T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT447164 EPI_ISL_437614,2020-02-25,SARS-CoV-2/human/THA/SI202769-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- G529T A895G T1891G C2652T G20134T G24047A T28144C CCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29732- >MT447165 EPI_ISL_437613,2020-02-25,SARS-CoV-2/human/THA/SI202872-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T G6865T C8782T G10670C G20134T G24047A T28144C TTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29709- >MT447166 EPI_ISL_437612,2020-01-23,SARS-CoV-2/human/THA/SI203285-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T C8782T C9598T G20134T G24047A T28144C TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT447167 EPI_ISL_437611,2020-03-11,SARS-CoV-2/human/THA/SI204487-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A1515G C9223T G11083T A14597G C14805T T17247C A17799G G26144T A28615G TACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29748- >MT447168 EPI_ISL_437610,2020-03-12,SARS-CoV-2/human/THA/SI204512-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- G90T C241T C3037T C14408T G20398A C21156T A23403G G24056T A26530G CGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29733- >MT447169 EPI_ISL_437609,2020-03-12,SARS-CoV-2/human/THA/SI204514-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T C8782T C9598T G20134T G24047A T28144C CCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29836- >MT447170 EPI_ISL_437608,2020-03-13,SARS-CoV-2/human/THA/SI204713-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G G1890A G4390T C9598T C11665A A19853G G20134T T28144C CCTAAAAAGGACAAAAAGAAGAAGGCTGATGAAACTCAAGCCTTACCGCAGAGACAGAAGAAACAGCAAACTGTGACTCTTCTTCCTGCTGCAGATTTGGATGATTTCTCCAAACAATTGCAACAATCCATGAGCAGTGCTGACTCAACTCAGGCCTAAACTCATGCAGACCACACAAGGCAGATGGGCTATATAAACGTTTTCGCTTTTCCGTTTACGATATATAGTCTACTCTTGTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29375- >MT447171 EPI_ISL_437607,2020-03-16,SARS-CoV-2/human/THA/SI205457-NST/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T C3768T G4390T C8782T C9598T T15354A G20134T G24047A G27877T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875C- >MT447172 EPI_ISL_437606,2020-03-18,SARS-CoV-2/human/THA/SI205529-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T T658C C3037T G4300T C14408T G19542T A23403G A24862G C28629T C29253T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860C- >MT447173 EPI_ISL_437605,2020-03-18,SARS-CoV-2/human/THA/SI205929-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C40T T42C C44T A895G C2942T G4390T C8782T C9598T C13329T G20134T G24047A G27877T T28144C TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT447174 EPI_ISL_437604,2020-03-01,SARS-CoV-2/human/THA/SI206377-NST/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T C8782T C9598T G20134T G24047A G27877T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT447175 EPI_ISL_437603,2020-03-19,SARS-CoV-2/human/THA/SI206587-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T C8782T C9598T G20134T G24047A G27877T T28144C ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT447176 EPI_ISL_437602,2020-03-20,SARS-CoV-2/human/THA/SI206917-NT/2020,Thailand ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A895G C2942T G4390T C8782T C9598T G20134T G24047A G27877T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAA29878- >MT447177 EPI_ISL_437512,2020-03-26,SARS-CoV-2/human/IRN/HGRC-2-2162/2020,Iran ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1397A T8707C G20887A C21627T C22735T T28688C C28830T G29742T ATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29833- >MT449636 EPI_ISL_437043,2020-04-01,SARS-CoV-2/human/USA/CA-CZB-1043/2020,United States / California ATTAAAGGTTTAT1- A231G T3331A C8175A A14940G G19735K G28851T TTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29726- >MT449637 EPI_ISL_437044,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-1044/2020,United States / California ATTAAAGGTTTAT1- G491A A14940G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449638 EPI_ISL_437045,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1045/2020,United States / California ATTAAAGGT1- A14940G T15922Y >MT449639 EPI_ISL_437046,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1046/2020,United States / California C4475T C10277T C14178T A23796G >MT449640 EPI_ISL_437047,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-1047/2020,United States / California ATTA1- G491A A14940G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449641 EPI_ISL_437048,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1048/2020,United States / California ATT1- C10277T >MT449642 EPI_ISL_437049,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1049/2020,United States / California ATTAAAGGTTTAT1- C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449643 EPI_ISL_437050,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1050/2020,United States / California AT1- C37T C10277T T15922Y C27500T >MT449644 EPI_ISL_437051,2020-04-06,SARS-CoV-2/human/USA/CA-CZB-1051/2020,United States / California ATTAAAGGTTT1----------C G7273A C10277T >MT449645 EPI_ISL_437052,2020-04-06,SARS-CoV-2/human/USA/CA-CZB-1052/2020,United States / California ATTAAAGGTTTATACC1- C10277T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449646 EPI_ISL_437054,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1054/2020,United States / California ATTAAA1- AAGTCATTT686- C10277T T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449647 EPI_ISL_437056,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1056/2020,United States / California ATTAAAGGTTT1- AAGTCATTT686- C10277T C17249T >MT449648 EPI_ISL_437057,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1057/2020,United States / California ATTAAAGGTTTATAC1- C40T C10277T G11083T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449649 EPI_ISL_437058,2020-04-06,SARS-CoV-2/human/USA/CA-CZB-1058/2020,United States / California ATTAAAGGTTTAT1- C40T T5669Y T10129C C10277T T17031A C26415Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT449650 EPI_ISL_437059,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-1059/2020,United States / California ATTAAAGGTTTATACC1- G1709T T4654Y A14940G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449651 EPI_ISL_437060,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-1060/2020,United States / California ATTAAAGGTTTAT1- G491A T10129Y A12850R A14940G T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449652 EPI_ISL_437061,2020-04-09,SARS-CoV-2/human/USA/CA-CZB-1061/2020,United States / California ATTAAAGGTTTAT1- G491A A14940G A15831R A15917M T15922C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449653 EPI_ISL_437062,2020-04-10,SARS-CoV-2/human/USA/CA-CZB-1062/2020,United States / California ATTAAAGGTTTAT1- G491A A6313G T10129Y A14940G C15277T T15922C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449654 EPI_ISL_437063,2020-04-11,SARS-CoV-2/human/USA/CA-CZB-1063/2020,United States / California ATTAAAGGTTT1- T13Y A12557G C24904T C25916T A27359G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449655 EPI_ISL_437064,2020-04-12,SARS-CoV-2/human/USA/CA-CZB-1064/2020,United States / California ATTAAAGGTTTATAC1- A14940G T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449656 EPI_ISL_437065,2020-04-13,SARS-CoV-2/human/USA/CA-CZB-1065/2020,United States / California ATTAAAGGTTT1- A14940G -26079CTT AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449657 EPI_ISL_437066,2020-04-16,SARS-CoV-2/human/USA/CA-CZB-1066/2020,United States / California ATTA1- A12557G A13211R C16323Y C24904T C25916T A27359G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449658 EPI_ISL_437067,2020-04-16,SARS-CoV-2/human/USA/CA-CZB-1067/2020,United States / California ATTAAAGGTTTAT1- T10129Y A12557G T15922C C24904T C25916T A27359G >MT449659 EPI_ISL_437068,2020-04-21,SARS-CoV-2/human/USA/CA-CZB-1068/2020,United States / California ATTAAAGGTTTA1- C11563T A15851M T15922Y C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449660 EPI_ISL_437069,2020-04-20,SARS-CoV-2/human/USA/CA-CZB-1069/2020,United States / California ATTAAAGGTTTATACCTTCCCAGGTAAC1- C6363T T6775W C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT449661 EPI_ISL_437070,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1070/2020,United States / California ATTAAAGGTTTA1- C9515T T10129Y C25692T C25703M C29095T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449662 EPI_ISL_437071,2020-04-23,SARS-CoV-2/human/USA/CA-CZB-1071/2020,United States / California ATTAAAGGTTTAT1------------C C11563T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449663 EPI_ISL_437072,2020-04-21,SARS-CoV-2/human/USA/CA-CZB-1072/2020,United States / California ATTAAAGGTTTA1- G10617A T15922C T25343K C25692T T28474Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449664 EPI_ISL_437073,2020-04-21,SARS-CoV-2/human/USA/CA-CZB-1073/2020,United States / California ATTAAAGGTTTA1- G10617A G22225T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449665 EPI_ISL_437074,2020-04-21,SARS-CoV-2/human/USA/CA-CZB-1074/2020,United States / California ATTAAAGGTTT1- T15922Y C24334Y C25692T A27860G C29358T >MT449666 EPI_ISL_437075,2020-04-22,SARS-CoV-2/human/USA/CA-CZB-1075/2020,United States / California ATTAAAGGTTT1- A20675T C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449667 EPI_ISL_437076,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1076/2020,United States / California ATTAAAGGTTT1- T13Y G491A T6386W A8193R A14940G T15922Y >MT449668 EPI_ISL_437077,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1077/2020,United States / California ATTAAAGGTT1- G491A A14940G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449669 EPI_ISL_437078,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1078/2020,United States / California ATTAAAGGTTTA1- C7006T A14940G T15922Y C16045T T19503W A25806R AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449670 EPI_ISL_437079,2020-04-26,SARS-CoV-2/human/USA/CA-CZB-1079/2020,United States / California ATTAAA1- C10277T G22093S C27500T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449671 EPI_ISL_437080,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1080/2020,United States / California ATTAAAGGTTTATACCTTCCCAGGTA1- T5395Y A8193G T10129Y T14179C A14940G T15922C C23575Y TGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29785- >MT449672 EPI_ISL_437081,2020-04-25,SARS-CoV-2/human/USA/CA-CZB-1081/2020,United States / California C6363T C9979T C23525Y C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449673 EPI_ISL_437082,2020-04-23,SARS-CoV-2/human/USA/CA-CZB-1082/2020,United States / California ATTAAAGGTTTAT1- A3398C A3408M C6395S A8181W A12557G T15922C T23875Y C24904T C25916T A27359G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449674 EPI_ISL_437083,2020-04-09,SARS-CoV-2/human/USA/CA-CZB-1083/2020,United States / California ATTA1- G491A C10332Y A14940G T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT449675 EPI_ISL_437084,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1084/2020,United States / California ATTAAAGGTTT1- A14940G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449676 EPI_ISL_437085,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-1085/2020,United States / California ATTA1- A14940G T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449677 EPI_ISL_437086,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1086/2020,United States / California ATTAAAGGTTTATACC1- C8334T G10793T A14940G T20871G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT449678 EPI_ISL_437087,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1087/2020,United States / California A1- A14940G T15922Y C16045T >MT449679 EPI_ISL_437088,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1088/2020,United States / California ATTAAAGGTTT1- G491A A14940G T15922Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT450872 EPI_ISL_445086,2020-04-13,SARS-CoV-2/human/SRB/KV26/2020,Serbia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G10265A C14408T A15972G C19718T A23403G T28759C GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT450873 EPI_ISL_437387,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0171/2020,United States / Virginia ATTAAA1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T >MT450874 EPI_ISL_437388,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0172/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T T11798C C14408T G20991T A23403G G25563T C25585T C29095T C29870M >MT450875 EPI_ISL_437389,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0173/2020,United States / Virginia ATT1- C241T C1059T C3037T T11798C C14408T G20991T A23403G G25563T C25585T C29095T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT450876 EPI_ISL_437390,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0174/2020,United States / Virginia ATT1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T >MT450877 EPI_ISL_437391,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0175/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT450878 EPI_ISL_437392,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0176/2020,United States / Virginia ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T A29865R AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT450879 EPI_ISL_437393,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0177/2020,United States / Virginia ATTAAAGGTT1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29869T- >MT450880 EPI_ISL_437394,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0178/2020,United States / Virginia ATTA1- T9W C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT450881 EPI_ISL_437395,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0179/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T >MT450882 EPI_ISL_437396,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0180/2020,United States / Virginia ATTA1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT450883 EPI_ISL_437397,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0181/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T C29870M >MT450884 EPI_ISL_437398,2020-03-28,SARS-CoV-2/human/USA/VA-DCLS-0182/2020,United States / Virginia ATTAAAGGTTT1- C241T C1059T C1917T C3037T C14408T A23403G G25563T >MT450885 EPI_ISL_437399,2020-03-31,SARS-CoV-2/human/USA/VA-DCLS-0183/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C1917T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT450886 EPI_ISL_437400,2020-04-07,SARS-CoV-2/human/USA/VA-DCLS-0184/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T C29870A >MT450887 EPI_ISL_437401,2020-04-07,SARS-CoV-2/human/USA/VA-DCLS-0185/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C1917T C3037T C14408T A23403G G25563T >MT450888 EPI_ISL_437402,2020-04-07,SARS-CoV-2/human/USA/VA-DCLS-0186/2020,United States / Virginia ATTAA1- C241T C1059T C3037T C14408T A23403G G25563T T27332A T27733G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT450889 EPI_ISL_437403,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0187/2020,United States / Virginia C241T C1059T C1917T C3037T C14408T A23403G G25563T G29431T >MT450890 EPI_ISL_437404,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0188/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T T5728C C14408T A23403G G25563T C29870A >MT450891 EPI_ISL_437405,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0189/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T C21575T A23403G G25563T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT450892 EPI_ISL_437406,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0190/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450893 EPI_ISL_437407,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0191/2020,United States / Virginia ATTAAAGGT1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T >MT450894 EPI_ISL_437408,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0193/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T G29868A C29870M >MT450895 EPI_ISL_437409,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0194/2020,United States / Virginia ATTAAAG1- C241T C1059T C1917T C3037T C14408T A23403G G25563T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT450896 EPI_ISL_437410,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0195/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T >MT450897 EPI_ISL_437411,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0196/2020,United States / Virginia C241T C2416T C3037T C14408T A23403G G25563T G26233T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT450898 EPI_ISL_437412,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0197/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C2416T C3037T C14408T A23403G G25563T G26233T C29870A >MT450899 EPI_ISL_437413,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0198/2020,United States / Virginia AT1- C241T C2416T C3037T C14408T A23403G G25563T G26233T >MT450900 EPI_ISL_437414,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0199/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C2416T C3037T C14408T A23403G G25563T G26233T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT450901 EPI_ISL_437415,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0200/2020,United States / Virginia A1- T10W C241T C1218T C2416T C3037T C14408T A23403G G25563T G26233T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT450902 EPI_ISL_437416,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0201/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C2416T C3037T C14408T A23403G G25563T G26233T >MT450903 EPI_ISL_437417,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0202/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1-------------------------------------G C241T C2416T C3037T C14408T A23403G G25563T G26233T GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT450904 EPI_ISL_437418,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0203/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C2416T C3037T C14408T A23403G G25563T G26233T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT450905 EPI_ISL_437419,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0204/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T C14408T A23403G G25563T G26233T C29870M >MT450906 EPI_ISL_437420,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0205/2020,United States / Virginia ATTAAAGGTTTATAC1- C241T C2416T C3037T C14408T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT450907 EPI_ISL_437421,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0206/2020,United States / Virginia AT1- C241T C1059T C1917T C3037T C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT450908 EPI_ISL_437422,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0207/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C10377T C12073T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT450909 EPI_ISL_437423,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0208/2020,United States / Virginia ATTAAA1- C241T C1059T C3037T C10377T C12073T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT450910 EPI_ISL_437424,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0209/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C1059T C3037T C10377T C12073T C14408T A23403G G25563T C29870A >MT450911 EPI_ISL_437425,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0210/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C10377T C12073T C14408T A23403G G25563T >MT450912 EPI_ISL_437426,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0211/2020,United States / Virginia ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT450913 EPI_ISL_437427,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0212/2020,United States / Virginia ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25563T >MT450914 EPI_ISL_437428,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0213/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G A24484T G25563T >MT450915 EPI_ISL_437429,2020-04-04,SARS-CoV-2/human/USA/VA-DCLS-0214/2020,United States / Virginia AT1- C241T C1059T C3037T C14408T A23403G A24484T G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT450916 EPI_ISL_437430,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0215/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C14408T A20055G C20235T A23403G G25563T T27332A T27733G A29865G >MT450917 EPI_ISL_437431,2020-04-06,SARS-CoV-2/human/USA/VA-DCLS-0216/2020,United States / Virginia A1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT450918 EPI_ISL_437432,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0217/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T C20719T A23403G G25563T C29870A >MT450919 EPI_ISL_416410,2020-01-24,SARS-CoV-2/human/AUS/VIC02/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G26144T T28561K C29421Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT450920 EPI_ISL_416411,2020-01-25,SARS-CoV-2/human/AUS/VIC03/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A24443R G26144T T28561K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450921 EPI_ISL_416412,2020-03-02,SARS-CoV-2/human/AUS/VIC04/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C884T G1397A G8653T C12357T C13506T C26447T T28561K T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450922 EPI_ISL_416413,2020-03-05,SARS-CoV-2/human/AUS/VIC05/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G5453R C8782T C17747T A17858G C18060T A24694T T28144C T28561K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450923 EPI_ISL_416414,2020-03-06,SARS-CoV-2/human/AUS/VIC06/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C186Y C197S G1266R G1397A G1676K T1751Y G2769S G3839R C4052Y C4071Y G4124K A4589W T6335Y A7514M T7540Y G7898K A8062W T8418Y G9314K C10956Y G11161K G12106K G12248K A13303R T13450Y T13698Y C13990Y G14712K C14909Y A14926W G14935K G14968S A15095M G15836K G15840K C16163Y G16381K G16432K T16584K T17723Y G18697A G19072K G19824K G20378K T21147K T21728Y G22133R C22509Y G22754K C23334Y G23519K T23703Y A23883W G24386K G24557K T26297Y C26509Y C26846Y G27506K G28003S G28346K T28561K T28688C C28826Y G29255K C29625T G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450924 EPI_ISL_416415,2020-02-08,SARS-CoV-2/human/AUS/VIC07/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T3670Y C8782T C10038T C12733Y T17142W C23536Y T28144C T28561K G28878A G29742A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT450925 EPI_ISL_416514,2020-03-15,SARS-CoV-2/human/AUS/VIC08/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747T A17858G C18060T G25049K C27526Y T28144C TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450926 EPI_ISL_416515,2020-03-15,SARS-CoV-2/human/AUS/VIC09/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C14805T T17247C C23244T G26144T GTACGATC29747- AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450927 EPI_ISL_416516,2020-03-16,SARS-CoV-2/human/AUS/VIC10/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C14805T T17247C C23244T G26144T GTACGATC29747- AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450928 EPI_ISL_416517,2020-03-16,SARS-CoV-2/human/AUS/VIC11/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C2416T C3037T C14408T C14786T G20578T C22370M A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450929 EPI_ISL_416518,2020-03-16,SARS-CoV-2/human/AUS/VIC12/2020,Australia / Victoria / Melbourne ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A1219W T1494K C2062Y A2480G C2558T T6971C G6975T G6977A C7072T A8182R A8884W C9170T C10252Y C11074Y G11083T C14805T A15005W C17339T A19689R A22105R G26144T T28250Y T29452Y TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT450930 EPI_ISL_419733,2020-01-31,SARS-CoV-2/human/AUS/VIC13/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A2476G C5512M C8782T T28144C C29743T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450931 EPI_ISL_419734,2020-02-02,SARS-CoV-2/human/AUS/VIC14/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C13511M T13518K C17373T G22894R G29017R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT450932 EPI_ISL_419736,2020-03-07,SARS-CoV-2/human/AUS/VIC17/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450933 EPI_ISL_419737,2020-03-07,SARS-CoV-2/human/AUS/VIC18/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A2480G C2558T T6971C G6975T G6977A C8895Y C9170T G11083T C14805T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450934 EPI_ISL_419738,2020-03-08,SARS-CoV-2/human/AUS/VIC19/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1515G C9223T G11083T C14805T T17247C G21795A G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450935 EPI_ISL_419741,2020-03-08,SARS-CoV-2/human/AUS/VIC20/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450936 EPI_ISL_419740,2020-03-09,SARS-CoV-2/human/AUS/VIC21/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T T6971C G6975T G6977A C9170T G11083T C14805T G26144T C26464T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450937 EPI_ISL_419742,2020-03-09,SARS-CoV-2/human/AUS/VIC22/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C6638T C11758Y C14408T C18652Y A20755C A23079R A23403G G25563T T25763Y TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450938 EPI_ISL_419743,2020-03-09,SARS-CoV-2/human/AUS/VIC23/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T T6971C G6975T G6977A C9170T C14805T G26144T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT450939 EPI_ISL_419739,2020-03-09,SARS-CoV-2/human/AUS/VIC24/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450940 EPI_ISL_419744,2020-03-10,SARS-CoV-2/human/AUS/VIC25/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1515G C9223T C14805T T17247C G21795A G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450941 EPI_ISL_419745,2020-03-10,SARS-CoV-2/human/AUS/VIC26/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1440A G2891A C7011T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450942 EPI_ISL_419746,2020-03-10,SARS-CoV-2/human/AUS/VIC27/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A T998K C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450943 EPI_ISL_419747,2020-03-10,SARS-CoV-2/human/AUS/VIC28/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT450944 EPI_ISL_419748,2020-03-10,SARS-CoV-2/human/AUS/VIC29/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T11638C C14408T A23403G T23797Y C28232Y GGG28881AAC C29708T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450945 EPI_ISL_419749,2020-03-10,SARS-CoV-2/human/AUS/VIC30/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G19788K G22894R T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450946 EPI_ISL_419750,2020-03-10,SARS-CoV-2/human/AUS/VIC31/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450947 EPI_ISL_419751,2020-03-10,SARS-CoV-2/human/AUS/VIC32/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T T5471W C8782T T18736C G19684T C24034T G24816R T26729C C27635T G28077C T28144C A29700G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450948 EPI_ISL_419752,2020-03-10,SARS-CoV-2/human/AUS/VIC33/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450949 EPI_ISL_419753,2020-03-10,SARS-CoV-2/human/AUS/VIC34/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A1079C G1397A T7225C C9319T C19862T T27384C T28688C G29742T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450950 EPI_ISL_419755,2020-03-10,SARS-CoV-2/human/AUS/VIC35/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29433R A29700G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450951 EPI_ISL_419765,2020-03-10,SARS-CoV-2/human/AUS/VIC36/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G7128A G11083T C14805T T17247C G26144T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450952 EPI_ISL_419754,2020-03-11,SARS-CoV-2/human/AUS/VIC37/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T3412W C5849Y C14408T A23403G C26447T GGG28881AAC TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450953 EPI_ISL_419756,2020-03-11,SARS-CoV-2/human/AUS/VIC38/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C10350T C14408T C15277T C15324T G20887R G22894R A23403G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450954 EPI_ISL_419757,2020-03-11,SARS-CoV-2/human/AUS/VIC39/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A4015G G4951A C14408T A23092W A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450955 EPI_ISL_419758,2020-03-11,SARS-CoV-2/human/AUS/VIC40/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T T10771C C17747T A17858G C18060T T28144C G29751T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450956 EPI_ISL_419760,2020-03-11,SARS-CoV-2/human/AUS/VIC41/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T T10771C C17747T A17858G C18060T T28144C C28315Y G29751T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450957 EPI_ISL_419761,2020-03-11,SARS-CoV-2/human/AUS/VIC42/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6312A C13730T C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450958 EPI_ISL_419763,2020-03-11,SARS-CoV-2/human/AUS/VIC43/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450959 EPI_ISL_419767,2020-03-11,SARS-CoV-2/human/AUS/VIC44/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A26530G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450960 EPI_ISL_419802,2020-03-11,SARS-CoV-2/human/AUS/VIC45/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C401Y C3037T C14408T C16733Y T22896Y A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450961 EPI_ISL_419816,2020-03-11,SARS-CoV-2/human/AUS/VIC46/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1646G G7553R G8111R C8782T T9129Y C17747T A17858G C18060T T28144C T28756Y TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT450962 EPI_ISL_419759,2020-03-12,SARS-CoV-2/human/AUS/VIC47/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T T6971C G6975T G6977A C9170T C14805T G23755C G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450963 EPI_ISL_419762,2020-03-12,SARS-CoV-2/human/AUS/VIC48/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C21301M A23403G G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450964 EPI_ISL_419764,2020-03-12,SARS-CoV-2/human/AUS/VIC49/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C18060Y A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450965 EPI_ISL_419766,2020-03-12,SARS-CoV-2/human/AUS/VIC50/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450966 EPI_ISL_419826,2020-03-12,SARS-CoV-2/human/AUS/VIC51/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- T490A C3177T C8782T T15900Y T18736C G19684T C24034T T26729C C27635T G28077C T28144C C29085T A29700G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT450967 EPI_ISL_419768,2020-03-12,SARS-CoV-2/human/AUS/VIC52/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T11638C C13047T C14408T A23403G GGG28881AAC C29708T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450968 EPI_ISL_419769,2020-03-12,SARS-CoV-2/human/AUS/VIC53/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450969 EPI_ISL_419770,2020-03-12,SARS-CoV-2/human/AUS/VIC54/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A26530G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450970 EPI_ISL_419776,2020-03-12,SARS-CoV-2/human/AUS/VIC55/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T5362W G11083T C14805T T17247C C18457T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450971 EPI_ISL_419777,2020-03-12,SARS-CoV-2/human/AUS/VIC56/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T A25050G T26729C C27635T G28077C T28144C A29700G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450972 EPI_ISL_419779,2020-03-12,SARS-CoV-2/human/AUS/VIC57/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1646G G5927R C8782T C17747T A17858G C18060T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450973 EPI_ISL_419784,2020-03-12,SARS-CoV-2/human/AUS/VIC58/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T T28688C G29742T TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT450974 EPI_ISL_419771,2020-03-13,SARS-CoV-2/human/AUS/VIC59/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6310A C6312A C13730T C19524T C23929T C28311T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450975 EPI_ISL_419772,2020-03-13,SARS-CoV-2/human/AUS/VIC60/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G7007R C8782Y G11083K G18180R C26088Y G26526K T28144Y C28868A TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT450976 EPI_ISL_419773,2020-03-13,SARS-CoV-2/human/AUS/VIC61/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G2001K C4653Y T11932Y G12067R T13078Y C14805T A15702W T17247C G17705K A18331W T19420Y A22623R G22894R G26144T G26842K G26995S G28580K ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT450977 EPI_ISL_419774,2020-03-13,SARS-CoV-2/human/AUS/VIC62/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A26530G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450978 EPI_ISL_419775,2020-03-13,SARS-CoV-2/human/AUS/VIC63/2020,Australia / Victoria ATTA1- C241T C3037T C14408T A23403G A26530G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT450979 EPI_ISL_419778,2020-03-13,SARS-CoV-2/human/AUS/VIC64/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C6638T C14408T A20755C A23403G G25563T C25721Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450980 EPI_ISL_419780,2020-03-13,SARS-CoV-2/human/AUS/VIC66/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T T28688C G29742T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT450981 EPI_ISL_419781,2020-03-13,SARS-CoV-2/human/AUS/VIC67/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T T28144C TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT450982 EPI_ISL_419782,2020-03-13,SARS-CoV-2/human/AUS/VIC68/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T G25340A T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450983 EPI_ISL_419783,2020-03-13,SARS-CoV-2/human/AUS/VIC69/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T G13118K C17747T A17858G C18060T A24694T G25340A T28144C TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450984 EPI_ISL_419786,2020-03-13,SARS-CoV-2/human/AUS/VIC70/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C14805T T17247C G23755K G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450985 EPI_ISL_419785,2020-03-14,SARS-CoV-2/human/AUS/VIC73/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450986 EPI_ISL_419787,2020-03-14,SARS-CoV-2/human/AUS/VIC75/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T A4515W AA13635WW C14408T A23403G A26530G TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450987 EPI_ISL_419788,2020-03-14,SARS-CoV-2/human/AUS/VIC76/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T G5463R C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G T29840W AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450988 EPI_ISL_419789,2020-03-14,SARS-CoV-2/human/AUS/VIC77/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT450989 EPI_ISL_419791,2020-03-14,SARS-CoV-2/human/AUS/VIC79/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C2558T A10081R G11083T C14805T G26144T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT450990 EPI_ISL_419792,2020-03-14,SARS-CoV-2/human/AUS/VIC80/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C2558T C14805T A21137G G26144T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT450991 EPI_ISL_419793,2020-03-14,SARS-CoV-2/human/AUS/VIC81/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C2558T G11083T C14724Y C14805T G26144T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450992 EPI_ISL_419794,2020-03-14,SARS-CoV-2/human/AUS/VIC82/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T211Y C2558T C14805T G23984R G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT450993 EPI_ISL_419799,2020-03-14,SARS-CoV-2/human/AUS/VIC83/2020,Australia / Victoria ATTAAAGGTT1- C14805T C16733Y T17247C C23244T G26144T GTACGATC29747- AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT450994 EPI_ISL_419803,2020-03-14,SARS-CoV-2/human/AUS/VIC84/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A1515R C9223Y G11083T C14805T T17247C T23335W T25236K G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT450995 EPI_ISL_419795,2020-03-15,SARS-CoV-2/human/AUS/VIC85/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C8782T T18736C G19684T C21642Y C24034T T26729C C27635T G28077C T28144C A29700G TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT450996 EPI_ISL_419796,2020-03-15,SARS-CoV-2/human/AUS/VIC86/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450997 EPI_ISL_419797,2020-03-15,SARS-CoV-2/human/AUS/VIC87/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A2480G C2558T A4952M G11083T C14805T C19763T G25049K G26144T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT450998 EPI_ISL_419798,2020-03-15,SARS-CoV-2/human/AUS/VIC88/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T C14805T C19763T G26144T C29580M TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT450999 EPI_ISL_419800,2020-03-15,SARS-CoV-2/human/AUS/VIC89/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C17104T A20268G A23403G T24847W G29734C TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451000 EPI_ISL_419801,2020-03-15,SARS-CoV-2/human/AUS/VIC90/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A17993G A20742R A23403G G25538R GGG28881AAC TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451001 EPI_ISL_419804,2020-03-15,SARS-CoV-2/human/AUS/VIC91/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T A1515R C3037T C9223Y C14408T A20268G A23403G C28854T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451002 EPI_ISL_419809,2020-03-15,SARS-CoV-2/human/AUS/VIC92/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451003 EPI_ISL_419815,2020-03-15,SARS-CoV-2/human/AUS/VIC93/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G1440A G2891A A4515W C7011T C7594Y C13377Y G21123R CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451004 EPI_ISL_419805,2020-03-16,SARS-CoV-2/human/AUS/VIC94/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451005 EPI_ISL_419806,2020-03-16,SARS-CoV-2/human/AUS/VIC95/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C17639T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451006 EPI_ISL_419807,2020-03-16,SARS-CoV-2/human/AUS/VIC96/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- ATG1605- C4683T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451007 EPI_ISL_419808,2020-03-16,SARS-CoV-2/human/AUS/VIC97/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451008 EPI_ISL_419810,2020-03-16,SARS-CoV-2/human/AUS/VIC98/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G11083K C14408T A23403G A26530G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451009 EPI_ISL_419811,2020-03-16,SARS-CoV-2/human/AUS/VIC99/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G1748R C2416T C3037T T3370Y G9092A C14408T C14786T G20578T A23403G G25563T T25956C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451010 EPI_ISL_419812,2020-03-16,SARS-CoV-2/human/AUS/VIC100/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451011 EPI_ISL_419813,2020-03-16,SARS-CoV-2/human/AUS/VIC101/2020,Australia / Victoria ATTAAAGGTT1- G1440A G2891A C7011T G11083K G25593S C26568Y A28999M C29774Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451012 EPI_ISL_419817,2020-03-16,SARS-CoV-2/human/AUS/VIC102/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C11074Y C23422T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451013 EPI_ISL_419814,2020-03-17,SARS-CoV-2/human/AUS/VIC103/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C583Y G2246R C3177T C8782T C9803Y C11747Y T14451Y T18736C G19684T T22981W C24034T A25050G T26729C C27635T G28077C T28144C A29700G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451014 EPI_ISL_419818,2020-03-17,SARS-CoV-2/human/AUS/VIC104/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C379A C1059T A1308R C3037T A4515W C7420Y C14408T T21980K A23403G G25563T C25587Y G28985R C29642Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451015 EPI_ISL_419819,2020-03-17,SARS-CoV-2/human/AUS/VIC105/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T T18381C C18877T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451016 EPI_ISL_419720,2020-03-17,SARS-CoV-2/human/AUS/VIC107/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C2523T C3037T C14408T G22894R A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451017 EPI_ISL_419714,2020-03-18,SARS-CoV-2/human/AUS/VIC108/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A C3177T C4400T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451018 EPI_ISL_419718,2020-03-18,SARS-CoV-2/human/AUS/VIC109/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T C14408T C20233Y A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451019 EPI_ISL_419716,2020-03-18,SARS-CoV-2/human/AUS/VIC110/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451020 EPI_ISL_419715,2020-03-18,SARS-CoV-2/human/AUS/VIC111/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C8782T C17550Y C17747T A17858G C18060T A23014D A24694T T28144C C29642Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451021 EPI_ISL_419821,2020-03-18,SARS-CoV-2/human/AUS/VIC112/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451022 EPI_ISL_419822,2020-03-18,SARS-CoV-2/human/AUS/VIC113/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T CC1059TY C2523T T2834K C3037T C14408T G22014K A23403G G25563T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451023 EPI_ISL_419725,2020-03-18,SARS-CoV-2/human/AUS/VIC114/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T5393Y A5475W C14408T A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451024 EPI_ISL_419717,2020-03-19,SARS-CoV-2/human/AUS/VIC115/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451025 EPI_ISL_419721,2020-03-19,SARS-CoV-2/human/AUS/VIC116/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T T6971C G6975T G6977A C9170T G11083T C14805T C17373Y C24734T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451026 EPI_ISL_419727,2020-03-19,SARS-CoV-2/human/AUS/VIC117/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T A13951T C17550Y T18736C G19684T G22894R C24034T T26729C C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451027 EPI_ISL_419719,2020-03-20,SARS-CoV-2/human/AUS/VIC118/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451028 EPI_ISL_419726,2020-03-19,SARS-CoV-2/human/AUS/VIC119/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451029 EPI_ISL_419722,2020-03-19,SARS-CoV-2/human/AUS/VIC120/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1515G C9223T C14805T T17247C G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451030 EPI_ISL_419723,2020-03-18,SARS-CoV-2/human/AUS/VIC121/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1515G G5435R C9223T C14805T T17247C G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451031 EPI_ISL_419724,2020-03-20,SARS-CoV-2/human/AUS/VIC122/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T C20629Y A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451032 EPI_ISL_419731,2020-03-20,SARS-CoV-2/human/AUS/VIC123/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C2507T C3037T C3373A C14408T GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451033 EPI_ISL_419728,2020-03-20,SARS-CoV-2/human/AUS/VIC126/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451034 EPI_ISL_419729,2020-03-20,SARS-CoV-2/human/AUS/VIC127/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A2480G C2558T T6971C G6975T G6977A C9170T G11083T C14805T G26144T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451035 EPI_ISL_419730,2020-03-20,SARS-CoV-2/human/AUS/VIC128/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2507T C3037T C3373A C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451036 EPI_ISL_419823,2020-03-21,SARS-CoV-2/human/AUS/VIC130/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T A9307G G13118T C17747T A17858G C18060T C22480T A24694T T28144C TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451037 EPI_ISL_419824,2020-03-21,SARS-CoV-2/human/AUS/VIC131/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C10851T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451038 EPI_ISL_419827,2020-03-22,SARS-CoV-2/human/AUS/VIC134/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2507T C3037T C3373A C14408T A23403G C26570Y GGG28881AAC GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451039 EPI_ISL_419828,2020-03-22,SARS-CoV-2/human/AUS/VIC135/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A25449G GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451040 EPI_ISL_419829,2020-03-22,SARS-CoV-2/human/AUS/VIC136/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451041 EPI_ISL_419830,2020-03-22,SARS-CoV-2/human/AUS/VIC137/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C13740T C14408T C15324T C23206T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451042 EPI_ISL_419834,2020-02-23,SARS-CoV-2/human/AUS/VIC138/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAG1- C8782T T14313Y C26088T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451043 EPI_ISL_419836,2020-03-15,SARS-CoV-2/human/AUS/VIC139/2020,Australia / Victoria ATTAAAGGTTTATACC1- C4084Y C8782T C17678Y C17747T A17858G C18060T A24694T T28144C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451044 EPI_ISL_419837,2020-03-16,SARS-CoV-2/human/AUS/VIC140/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C3634T C8782T C17747Y A17858G C18060T T28144C AC29761- CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451045 EPI_ISL_419838,2020-03-16,SARS-CoV-2/human/AUS/VIC141/2020,Australia / Victoria ATTAAAGGTTTATACC1- C241T C3037T C14408T C22945M G23025R A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451046 EPI_ISL_419839,2020-03-16,SARS-CoV-2/human/AUS/VIC142/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T G12052T C14408T C22998S AA23040RR C23054S A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451047 EPI_ISL_419840,2020-03-16,SARS-CoV-2/human/AUS/VIC143/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C313T C3037T C14408T C21139T A23403G GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451048 EPI_ISL_419841,2020-03-17,SARS-CoV-2/human/AUS/VIC144/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A23403G T25473C GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451049 EPI_ISL_419842,2020-03-17,SARS-CoV-2/human/AUS/VIC145/2020,Australia / Victoria ATTA1- T1368C C6990T G11083T C14805T G18985T C23707T G26144T G28378T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451050 EPI_ISL_419843,2020-03-17,SARS-CoV-2/human/AUS/VIC146/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C2558T G11083T C14805T T23143Y C25207Y G26144T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451051 EPI_ISL_419844,2020-03-17,SARS-CoV-2/human/AUS/VIC147/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C379A C1059T C3037T C14408T C22224T G22973S AG23092RK A23403G G25563T G27163T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451052 EPI_ISL_419845,2020-03-17,SARS-CoV-2/human/AUS/VIC148/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451053 EPI_ISL_419846,2020-03-17,SARS-CoV-2/human/AUS/VIC149/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6504T C14408T A23403G G27996T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451054 EPI_ISL_419847,2020-03-17,SARS-CoV-2/human/AUS/VIC150/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A C683Y C3177T C8782T C11833Y T18736C G19684T C24034T G24914S T26714K T26729C C27635T G28077C T28144C A29700G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451055 EPI_ISL_419848,2020-03-17,SARS-CoV-2/human/AUS/VIC151/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- A1460R T5449K A5452W C5884T C8782Y G11083K C14805Y T17247C C17747Y A17858R C18060Y G22464R G26144K CGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29743- >MT451056 EPI_ISL_419849,2020-03-17,SARS-CoV-2/human/AUS/VIC152/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- T1107Y G11083T C14805T T17247C G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451057 EPI_ISL_419850,2020-03-17,SARS-CoV-2/human/AUS/VIC153/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C313T C3037T C14408T C22224T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451058 EPI_ISL_419851,2020-03-17,SARS-CoV-2/human/AUS/VIC154/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C3784T C14408T A20268G A23403G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451059 EPI_ISL_419852,2020-03-17,SARS-CoV-2/human/AUS/VIC155/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C2523T C3037T C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451060 EPI_ISL_419853,2020-03-17,SARS-CoV-2/human/AUS/VIC156/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T A23403G GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451061 EPI_ISL_419854,2020-03-17,SARS-CoV-2/human/AUS/VIC157/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T C17104T A20268G A21630R A23403G C28603Y G29734C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451062 EPI_ISL_419855,2020-03-18,SARS-CoV-2/human/AUS/VIC158/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G8102T C14408T G14712A C14877T G17193T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451063 EPI_ISL_419856,2020-03-18,SARS-CoV-2/human/AUS/VIC159/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G5387K C8782T C9803T C17747T A17858G C18060T G20773K A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451064 EPI_ISL_419857,2020-03-18,SARS-CoV-2/human/AUS/VIC160/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T A16076R C17747Y A17858G C18060T A24694T T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451065 EPI_ISL_419859,2020-03-18,SARS-CoV-2/human/AUS/VIC162/2020,Australia / Victoria ATTAAAGGTTT1- C8782T C17747Y A17858G C18060T A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451066 EPI_ISL_419860,2020-03-18,SARS-CoV-2/human/AUS/VIC163/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2507T C3037T C3373A C14408T A23403G GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451067 EPI_ISL_419861,2020-03-18,SARS-CoV-2/human/AUS/VIC164/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C8025T C9319M T9475Y C14408T G19300R A20268G T20369Y T20459W A23403G G29734C TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT451068 EPI_ISL_419862,2020-03-18,SARS-CoV-2/human/AUS/VIC165/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C17747T A17858G T17978Y C18060T A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451069 EPI_ISL_419863,2020-03-18,SARS-CoV-2/human/AUS/VIC166/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C2416T C3037T A4316G G11113T C14408T T22930Y A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451070 EPI_ISL_419864,2020-03-18,SARS-CoV-2/human/AUS/VIC167/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C379A C1059T C2595Y C3037T A6464R C14408T C22224T A23403G G25563T G27163T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451071 EPI_ISL_419865,2020-03-18,SARS-CoV-2/human/AUS/VIC168/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A20755C A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451072 EPI_ISL_419866,2020-03-18,SARS-CoV-2/human/AUS/VIC169/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T3478Y G11083T C14805T G20247K G26144T G28842T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451073 EPI_ISL_419867,2020-03-18,SARS-CoV-2/human/AUS/VIC170/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C13740T C14408T C15324T C23206T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451074 EPI_ISL_419868,2020-03-18,SARS-CoV-2/human/AUS/VIC171/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACG1- G388T A2480G C2558T G11083T G11376T C14805T T22965C G26144T C27600T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451075 EPI_ISL_419869,2020-03-18,SARS-CoV-2/human/AUS/VIC172/2020,Australia / Victoria ATTAAAGGTTTA1- A2480G C2558T G7405K C8892Y G11376T C14805T G26144T C27600T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451076 EPI_ISL_419870,2020-03-18,SARS-CoV-2/human/AUS/VIC173/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C3253T C8782T C17747Y A17858G C18060T T28144C TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451077 EPI_ISL_419871,2020-03-18,SARS-CoV-2/human/AUS/VIC174/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451078 EPI_ISL_419872,2020-03-18,SARS-CoV-2/human/AUS/VIC175/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A20755C A23403G G25563T C29247T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451079 EPI_ISL_419873,2020-03-18,SARS-CoV-2/human/AUS/VIC176/2020,Australia / Victoria ATTAAA1- T17K G11083T G13627T C14805T C15540T C17586Y A19175R G26144T G26909K A28338G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451080 EPI_ISL_419874,2020-03-18,SARS-CoV-2/human/AUS/VIC177/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C5365Y C8782T C17747Y A17858G C18060T A24694T G25340A C25626Y T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451081 EPI_ISL_419875,2020-03-18,SARS-CoV-2/human/AUS/VIC178/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G T25473C T27233Y GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451082 EPI_ISL_419876,2020-03-18,SARS-CoV-2/human/AUS/VIC179/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- -11075TT G11084T C14805T T17247C G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451083 EPI_ISL_419878,2020-03-19,SARS-CoV-2/human/AUS/VIC181/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C23929T C28311T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451084 EPI_ISL_450212,2020-03-19,SARS-CoV-2/human/AUS/VIC182/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T490A C3177T C8782T C16995T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451085 EPI_ISL_419879,2020-03-19,SARS-CoV-2/human/AUS/VIC183/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C3796T C10619M C14408T A23403G C23557Y GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451086 EPI_ISL_419880,2020-03-19,SARS-CoV-2/human/AUS/VIC184/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T T1791Y C2455Y C3037T C10626Y C14408T C21711T C22227Y A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451087 EPI_ISL_419881,2020-03-19,SARS-CoV-2/human/AUS/VIC185/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G204T C241T C1059T C3037T G8676T C14408T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451088 EPI_ISL_419882,2020-03-19,SARS-CoV-2/human/AUS/VIC186/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G210T A2480G C2558T G11083T C14805T G26144T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451089 EPI_ISL_419883,2020-03-19,SARS-CoV-2/human/AUS/VIC187/2020,Australia / Victoria ATTA1- G210T A2480G C2558T G11083T C14805T G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451090 EPI_ISL_419884,2020-03-19,SARS-CoV-2/human/AUS/VIC188/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C6312A G11083T C13730T C16767Y A21267G G22335T C23929T C28311T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451091 EPI_ISL_419885,2020-03-19,SARS-CoV-2/human/AUS/VIC189/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C8782T C12741T C17747T A17858G C18060T C21642T A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451092 EPI_ISL_419886,2020-03-19,SARS-CoV-2/human/AUS/VIC190/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451093 EPI_ISL_419887,2020-03-19,SARS-CoV-2/human/AUS/VIC191/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C679T C3037T C14408T C16386T A23403G GGG28881AAC CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451094 EPI_ISL_419888,2020-03-19,SARS-CoV-2/human/AUS/VIC192/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A23403G A26530G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451095 EPI_ISL_419889,2020-03-19,SARS-CoV-2/human/AUS/VIC193/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G1440A G2891A T4509K T4512Y T4623W C7011T G29808K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451096 EPI_ISL_419890,2020-03-19,SARS-CoV-2/human/AUS/VIC194/2020,Australia / Victoria ATTAAAGGTT1- A6806R G11083T C14805T A23064W G24236T G25183T G26144T T28743C G28881A G29692T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451097 EPI_ISL_419891,2020-03-19,SARS-CoV-2/human/AUS/VIC195/2020,Australia / Victoria ATTAAAGGTTTA1- C241T C3037T G4180A C14408T C17104T A20268G A23403G G29734C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451098 EPI_ISL_419892,2020-03-19,SARS-CoV-2/human/AUS/VIC196/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C2416T C3037T C14408T G20578T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451099 EPI_ISL_419893,2020-03-19,SARS-CoV-2/human/AUS/VIC197/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A4446W G10265A C14408T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451100 EPI_ISL_419894,2020-03-19,SARS-CoV-2/human/AUS/VIC198/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A23403G TGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29807- >MT451101 EPI_ISL_419895,2020-03-19,SARS-CoV-2/human/AUS/VIC199/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T T19839C A23403G C24099T GGG28881AAC CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451102 EPI_ISL_419896,2020-03-19,SARS-CoV-2/human/AUS/VIC201/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T T27546C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451103 EPI_ISL_419897,2020-03-19,SARS-CoV-2/human/AUS/VIC202/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T C14408T G20578T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451104 EPI_ISL_419898,2020-03-19,SARS-CoV-2/human/AUS/VIC203/2020,Australia / Victoria ATTAAAGG1- A2480G C2558T T10480C G11083T C14805T T26130C G26144T G27217T C27559T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451105 EPI_ISL_419899,2020-03-19,SARS-CoV-2/human/AUS/VIC204/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T G25340A T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451106 EPI_ISL_419900,2020-03-19,SARS-CoV-2/human/AUS/VIC205/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T G17122K C17550Y C17747T A17858G C18060T A24694T T28144C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451107 EPI_ISL_419901,2020-03-19,SARS-CoV-2/human/AUS/VIC206/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1926S C3037T C14408T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451108 EPI_ISL_419902,2020-03-19,SARS-CoV-2/human/AUS/VIC207/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451109 EPI_ISL_419903,2020-03-20,SARS-CoV-2/human/AUS/VIC208/2020,Australia / Victoria ATTAAAGGTTTA1- A7479G C9857Y G11083T C14805T T17247C C25572T G26144T C28887T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451110 EPI_ISL_419904,2020-03-20,SARS-CoV-2/human/AUS/VIC209/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A C3177T C6040T C8782Y C8950T G12478A T18736C C19185Y T19713C C24034T T26729C G28077C T28144C C28896G C29451T A29700G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451111 EPI_ISL_419905,2020-03-20,SARS-CoV-2/human/AUS/VIC210/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A20268G A23403G A24121G C28854T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451112 EPI_ISL_419906,2020-03-20,SARS-CoV-2/human/AUS/VIC211/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C14408T G17562T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451113 EPI_ISL_419907,2020-03-20,SARS-CoV-2/human/AUS/VIC212/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T A7953R C14408T T16990W A22337R T22731Y T22782Y A23403G T25319W A25326W GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451114 EPI_ISL_419908,2020-03-20,SARS-CoV-2/human/AUS/VIC213/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451115 EPI_ISL_419909,2020-03-20,SARS-CoV-2/human/AUS/VIC214/2020,Australia / Victoria ATTAAAGGT1- C241T C1059T C3037T G3307A G12824R C14408T G16700K A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451116 EPI_ISL_419910,2020-03-20,SARS-CoV-2/human/AUS/VIC215/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A C3177T C6258Y C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451117 EPI_ISL_419911,2020-03-20,SARS-CoV-2/human/AUS/VIC216/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2523T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451118 EPI_ISL_419912,2020-03-20,SARS-CoV-2/human/AUS/VIC217/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T G613A C3037T C14408T G22346A A23403G TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT451119 EPI_ISL_419913,2020-03-20,SARS-CoV-2/human/AUS/VIC218/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C527T A2480G C2558T G11083T T11182C C13721T C14805T G23593T G26144T C26885T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451120 EPI_ISL_419914,2020-03-20,SARS-CoV-2/human/AUS/VIC219/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1545Y C3037T T7579W G9389K C14408T A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451121 EPI_ISL_419915,2020-03-20,SARS-CoV-2/human/AUS/VIC220/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C5211Y C14408T C17985T A23403G C23423T C24844T G25563T C29353T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451122 EPI_ISL_419917,2020-03-20,SARS-CoV-2/human/AUS/VIC222/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T A9307G G13118T C17747T A17858G C18060T C22480T A24694T T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451123 EPI_ISL_419918,2020-03-20,SARS-CoV-2/human/AUS/VIC223/2020,Australia / Victoria ATTA1- C3096T G11083T C12781T G13627T C14805T C15540T G17944T G26144T A28338G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451124 EPI_ISL_419919,2020-03-20,SARS-CoV-2/human/AUS/VIC224/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G613A C3037T C14408T G22346A A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451125 EPI_ISL_419920,2020-03-20,SARS-CoV-2/human/AUS/VIC225/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G957A G5441K A5452R C8782T G11083T C17747T A17858G C18060T T28144C ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451126 EPI_ISL_419921,2020-03-20,SARS-CoV-2/human/AUS/VIC226/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T A1015G C3037T A3625C C14408T T17688C A23403G G28357K GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451127 EPI_ISL_419922,2020-03-20,SARS-CoV-2/human/AUS/VIC227/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241Y C1059Y T1368Y C3037Y C6990Y G11083K C14408Y C14805Y C20736Y A23403R C23707Y C24844Y G25563K G26144K G26558K GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451128 EPI_ISL_419923,2020-03-20,SARS-CoV-2/human/AUS/VIC228/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T A1015G C3037T A3625C C14408T T17688C A23403G GGG28881AAC ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT451129 EPI_ISL_419924,2020-03-21,SARS-CoV-2/human/AUS/VIC229/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T A13024R C17747T A17858G C18060T A24694T C25771Y T28144C GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451130 EPI_ISL_419926,2020-03-21,SARS-CoV-2/human/AUS/VIC231/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6312A G11083T C13730T C18680T C23929T C28311T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451131 EPI_ISL_419927,2020-03-21,SARS-CoV-2/human/AUS/VIC232/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451132 EPI_ISL_419928,2020-03-21,SARS-CoV-2/human/AUS/VIC233/2020,Australia / Victoria ATTAAAGGTTTA1- C66T C7334T A7479G G11083T C14805T C15222T T17247C C21575T C25572T G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451133 EPI_ISL_419929,2020-03-21,SARS-CoV-2/human/AUS/VIC234/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2091T C2416T C3037T G8371T C14408T C19586Y A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451134 EPI_ISL_419931,2020-03-21,SARS-CoV-2/human/AUS/VIC236/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A22798G A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451135 EPI_ISL_419932,2020-03-21,SARS-CoV-2/human/AUS/VIC237/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A1115R C6312A C7093T G11083T C13730T T14313C G21123T C23929T C28311T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451136 EPI_ISL_419933,2020-03-21,SARS-CoV-2/human/AUS/VIC238/2020,Australia / Victoria ATTA1- C241T C3037T C14408T A23403G GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451137 EPI_ISL_419934,2020-03-21,SARS-CoV-2/human/AUS/VIC239/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C15371T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451138 EPI_ISL_419935,2020-03-21,SARS-CoV-2/human/AUS/VIC240/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1572Y C3037T C14408T T19839C A23403G A25968R GGG28881AAC TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451139 EPI_ISL_419936,2020-03-21,SARS-CoV-2/human/AUS/VIC241/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747T A17858G C18060T G20773R A24694T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451140 EPI_ISL_419938,2020-03-21,SARS-CoV-2/human/AUS/VIC243/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C10851T C14408T A23403G C25521T G25563T G25690R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451141 EPI_ISL_419939,2020-03-21,SARS-CoV-2/human/AUS/VIC244/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAG1- C4540T C8782T T9477A C11669M C14805T G25979T G26724K T28144C C28311T C28657T C28863T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451142 EPI_ISL_419940,2020-03-21,SARS-CoV-2/human/AUS/VIC245/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T G3014A C3037T C10851T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451143 EPI_ISL_419941,2020-03-21,SARS-CoV-2/human/AUS/VIC246/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T11515A C14408T A23403G G25563T G28451C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451144 EPI_ISL_419942,2020-03-21,SARS-CoV-2/human/AUS/VIC247/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C10851T C14408T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451145 EPI_ISL_419943,2020-03-21,SARS-CoV-2/human/AUS/VIC248/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C10851T C14408T G20931T A23403G C23439T G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451146 EPI_ISL_419944,2020-03-21,SARS-CoV-2/human/AUS/VIC249/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1427T C3037T G3419A C14408T A23403G GGG28881AAC AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451147 EPI_ISL_419945,2020-03-21,SARS-CoV-2/human/AUS/VIC250/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T A2713M C3037T C14408T A23403G GGG28881AAC C29724Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451148 EPI_ISL_419946,2020-03-21,SARS-CoV-2/human/AUS/VIC251/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G2528A C6312A C9967T G11083T C13730T C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451149 EPI_ISL_419947,2020-03-21,SARS-CoV-2/human/AUS/VIC252/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C11941T C14408T A23403G G27281T GGG28881AAC TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451150 EPI_ISL_419948,2020-03-21,SARS-CoV-2/human/AUS/VIC253/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451151 EPI_ISL_419949,2020-03-21,SARS-CoV-2/human/AUS/VIC254/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A20268G A23403G A24121G A27947R C28854T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451152 EPI_ISL_420036,2020-03-21,SARS-CoV-2/human/AUS/VIC256/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A C14805T G21316K G25979T T28144C C28311T C28657T C28863T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451153 EPI_ISL_419950,2020-03-21,SARS-CoV-2/human/AUS/VIC257/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A20268G A23403G A24121G A27947R C28854T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451154 EPI_ISL_419951,2020-03-21,SARS-CoV-2/human/AUS/VIC258/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C21648T A23403G C23673T G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451155 EPI_ISL_419952,2020-03-21,SARS-CoV-2/human/AUS/VIC259/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C18348Y C21711T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451156 EPI_ISL_419953,2020-03-21,SARS-CoV-2/human/AUS/VIC260/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2706T C3037T C5348T C12970T C14408T A23403G A23416T G25563T C28528T C29119T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451157 EPI_ISL_419954,2020-03-21,SARS-CoV-2/human/AUS/VIC261/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C21711T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451158 EPI_ISL_419955,2020-03-21,SARS-CoV-2/human/AUS/VIC262/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C482Y G558K G660K G663K G1018K C1076T G1397A G1406K G2036K G2604K G3004K G3564K G3896K G5155K G5196K G5233R G5354K G5375B G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G8790K G9141K G9249K A9749G G10098K G10754K G10986K G11083T G11535K G12041K G12164K G13193K G13240K G13571K G14277K G14548R G16068K G17096K G17848K G20128K G23288K G23302K G23505K G24557K G24933K C27964T G28079K G28559K T28688C C29253Y G29742T G29779K G29781K TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451159 EPI_ISL_419956,2020-03-21,SARS-CoV-2/human/AUS/VIC263/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C10851T C14183T C14408T C23127Y A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451160 EPI_ISL_419957,2020-03-22,SARS-CoV-2/human/AUS/VIC264/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G613A C3037T C14408T G15898K G22346A A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451161 EPI_ISL_419958,2020-03-22,SARS-CoV-2/human/AUS/VIC265/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C T28853K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451162 EPI_ISL_419959,2020-03-22,SARS-CoV-2/human/AUS/VIC266/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G613A C3037T C14408T G22346A A23403G ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451163 EPI_ISL_419960,2020-03-22,SARS-CoV-2/human/AUS/VIC267/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G17562T C21714Y A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451164 EPI_ISL_419961,2020-03-22,SARS-CoV-2/human/AUS/VIC268/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C2110Y A7479G G11083T C14805T T17247C C25572T G26144T C28887T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451165 EPI_ISL_419962,2020-03-22,SARS-CoV-2/human/AUS/VIC269/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T GTCATGTTA510- C3037T C7732T C14408T A23403G C27046T GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451166 EPI_ISL_419963,2020-03-22,SARS-CoV-2/human/AUS/VIC270/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G C29739T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451167 EPI_ISL_419964,2020-03-22,SARS-CoV-2/human/AUS/VIC271/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G C29739T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451168 EPI_ISL_419965,2020-03-22,SARS-CoV-2/human/AUS/VIC272/2020,Australia / Victoria ATTAAAGGTTTA1- C1076T G1397A C2470Y G11083T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451169 EPI_ISL_419966,2020-03-22,SARS-CoV-2/human/AUS/VIC273/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A187G C241T C3037T C8140Y C14408T A23403G C25916T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451170 EPI_ISL_419967,2020-03-22,SARS-CoV-2/human/AUS/VIC274/2020,Australia / Victoria ATTA1- C241T C3037T C6723T T12748Y C14408T A23403G T26094C G28077K TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451171 EPI_ISL_419968,2020-03-22,SARS-CoV-2/human/AUS/VIC275/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G G25429T C26461T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451172 EPI_ISL_419969,2020-03-22,SARS-CoV-2/human/AUS/VIC276/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C16289Y C21789T C23929T C23934T C28311T T28963A CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451173 EPI_ISL_419970,2020-03-22,SARS-CoV-2/human/AUS/VIC277/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451174 EPI_ISL_419971,2020-03-22,SARS-CoV-2/human/AUS/VIC278/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C7165T T11959C C14408T A20268G A23403G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451175 EPI_ISL_419972,2020-03-22,SARS-CoV-2/human/AUS/VIC279/2020,Australia / Victoria ATTAAA1- C241T C1059T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451176 EPI_ISL_419973,2020-03-22,SARS-CoV-2/human/AUS/VIC280/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C3096T G11083T C12781T G13627T C14805T C15540T G17944T G26144T A28338G TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451177 EPI_ISL_419974,2020-03-22,SARS-CoV-2/human/AUS/VIC283/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C15324T G15982T A23403G G28233T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451178 EPI_ISL_419975,2020-03-22,SARS-CoV-2/human/AUS/VIC284/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T A23403G C29739T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451179 EPI_ISL_419976,2020-03-22,SARS-CoV-2/human/AUS/VIC285/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C15324T A23403G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451180 EPI_ISL_419977,2020-03-22,SARS-CoV-2/human/AUS/VIC286/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C15324T A23403G C25710T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451181 EPI_ISL_419978,2020-03-22,SARS-CoV-2/human/AUS/VIC287/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G C24797T G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451182 EPI_ISL_419979,2020-03-22,SARS-CoV-2/human/AUS/VIC288/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G957A A1547G G7042T C8782T C17747T A17858G C18060T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451183 EPI_ISL_419980,2020-03-22,SARS-CoV-2/human/AUS/VIC289/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C3037T T7438C C14408T A23403G C29353T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451184 EPI_ISL_419983,2020-03-23,SARS-CoV-2/human/AUS/VIC292/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2523T C3037T C14408T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451185 EPI_ISL_419984,2020-03-23,SARS-CoV-2/human/AUS/VIC293/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T G10368A A15205G C17569T C26088T T28144C A28885G TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451186 EPI_ISL_419985,2020-03-23,SARS-CoV-2/human/AUS/VIC294/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T C27964T T28688C G29742T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451187 EPI_ISL_419986,2020-03-23,SARS-CoV-2/human/AUS/VIC295/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A G12274T C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451188 EPI_ISL_419987,2020-03-23,SARS-CoV-2/human/AUS/VIC296/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G18589T A23403G C25528T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451189 EPI_ISL_419988,2020-03-23,SARS-CoV-2/human/AUS/VIC297/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K G660K G663K C1912T G2036K C3037T C3373A C3551Y G3564K G5375K G5617K G5847K G5880K G7017K G7038K G7214K G8790K G9141K G9249K G10101K G10986K C11195T G11535K G12164K G13571K G14277K C14408T G17096K G17848K G23343K A23403G G24557K G24933K G28079K C28866T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451190 EPI_ISL_419989,2020-03-23,SARS-CoV-2/human/AUS/VIC298/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2523T C3037T G3564K C14408T A23403G G24933K G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451191 EPI_ISL_419990,2020-03-23,SARS-CoV-2/human/AUS/VIC299/2020,Australia / Victoria ATTAAAGGTT1- C186A C2558T G10870K G11083T C14805T G26144T C26570Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451192 EPI_ISL_419991,2020-03-23,SARS-CoV-2/human/AUS/VIC300/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C920Y C3037T C3784T G11083K C14408T A20268G A23403G C28651T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451193 EPI_ISL_419992,2020-03-23,SARS-CoV-2/human/AUS/VIC301/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C2558T T5404W C14805T C21843Y G26144T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451194 EPI_ISL_419993,2020-03-23,SARS-CoV-2/human/AUS/VIC302/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C15324T G17100R G22918T A23403G G28690T G29825R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451195 EPI_ISL_419994,2020-03-23,SARS-CoV-2/human/AUS/VIC303/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G18318T A23403G G25429T C25916T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451196 EPI_ISL_419995,2020-03-23,SARS-CoV-2/human/AUS/VIC304/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- A3904W C4540T C8782T T9477A C14805T C17304Y G25979T T28144C C28311T C28657T C28863T C29608Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451197 EPI_ISL_419996,2020-03-23,SARS-CoV-2/human/AUS/VIC305/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C140Y C3096T C11074Y G11083T G13627T C14805T G15359R C15540T G26144T A28338G G29212T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451198 EPI_ISL_419997,2020-03-23,SARS-CoV-2/human/AUS/VIC306/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C482Y G558K G660K G663K G1018K C1059T G2036K C2523T G2604K G2769K C3037T C3551Y G3564K G4505K G5847K G5880K G6483K G7017K G7038K C7194Y G7214K G8790K G9141K G9249K G10167K G10986K G11535K G12164K G13571K G14277K C14408T G14548R G15769K G16068K G16787K G17096K G17848K G18297K G18318K G21123K G22018K G22899K A23403G G24557K G24933K G25563T G28079K G28517K G28559K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451199 EPI_ISL_419998,2020-03-23,SARS-CoV-2/human/AUS/VIC307/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C482Y G558K G660K G663K C2416T G3004K C3037T C3551Y G3564K G5880K G7017K G7038K G8790K G9141K G9249K G10986K G12164K G12274R G13571K C14408T C14786T G17096K G19252K G20578T A23403G G24557K G24933K G25563T C26681T G28079K TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451200 EPI_ISL_419999,2020-03-23,SARS-CoV-2/human/AUS/VIC308/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C2523T C3037T C14408T G16206K T19533W A20403R A23403G G25563T G26398R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451201 EPI_ISL_420000,2020-03-23,SARS-CoV-2/human/AUS/VIC309/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451202 EPI_ISL_420001,2020-03-23,SARS-CoV-2/human/AUS/VIC310/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451203 EPI_ISL_420002,2020-03-23,SARS-CoV-2/human/AUS/VIC311/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451204 EPI_ISL_420003,2020-03-23,SARS-CoV-2/human/AUS/VIC312/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C15324T G22918K A23403G C23557T G24857R G28690T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451205 EPI_ISL_420004,2020-03-24,SARS-CoV-2/human/AUS/VIC313/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- G285K G558K G663K G839K G862K G942K G945K C1076T G1181K G1397A G1406K G1488K G2036K G2381K G2604K G3004K A3048W G3050K G3146R G3259K G3479K G3482K AC3504WY G3509K G3564B T3592Y G3663S G3731K G3896K G4261K G4694K G4854K GG5155KK G5196K G5200K G5233R G5617K C5796Y C5826Y G5847K G5880K G6170K C6468Y G6483K G6804K C6968Y G7010K G7017K G7038K C7194Y G7214K G8027K G8075K G8696K G8790K G8901K G9950K G10058K GG10097KK G10101K G10167K C10277Y G10283K G10368K G10575K G10675K G10754K G10986K G10996K G11083T A11101M G11417K G11535K G11693K G12164K G12491K G12671K G12802K G13193K G13729K A13888W G14188K G14197K G14277K G14428K G15075K C15113Y G15202K G15380K G15769K G16068K G16188K G16508K C16580Y C16646Y G16663K C16729Y G16787K G16988K G17096K G17848K G17915K C18138Y G18170K G18297K G18318K A18354M C18946Y T19016Y T19215Y G19478K G19480K G19679K G20128K G20627K G20925K C21090Y G21100K G21123K G21786K G22018K G23149K CG23291YK G23302K G23343K C23410Y G23505K G23663K G23747K C23766Y G24040K A24300W G24557K G24933K G25013K G25352K G25354K G25660K G25793K C25836Y C25976Y G26428K G27033K G27366K G27602K C27964T G28077K G28079K A28468W T28470Y G28479K A28496W T28510Y G28514B A28523W G28548K CG28556YK G28559K GG28631KB A28653R C28657Y T28688Y G28690R G28736K T28756Y C28994Y C28997Y G29195S G29348K G29702K G29706K C29732Y G29742T A29746W C29762Y G29766K G29779K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451206 EPI_ISL_420005,2020-03-24,SARS-CoV-2/human/AUS/VIC314/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C482Y G1397A G3564K G6159K A9109W G9111K G11083T G12164K G22899K A25381M T27384Y C27964T T28688Y AGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29687- >MT451207 EPI_ISL_420006,2020-03-24,SARS-CoV-2/human/AUS/VIC315/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C16848T A23403G GGG28881AAC C29837T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451208 EPI_ISL_420007,2020-03-24,SARS-CoV-2/human/AUS/VIC316/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G374A C8782T C17747T A17858G C18060T T21180Y T28144C C29353Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451209 EPI_ISL_420008,2020-03-24,SARS-CoV-2/human/AUS/VIC317/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G374A C8782T C17747T A17858G C18060T T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451210 EPI_ISL_420009,2020-03-24,SARS-CoV-2/human/AUS/VIC318/2020,Australia / Victoria ATTAAAGGTTTA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451211 EPI_ISL_420010,2020-03-24,SARS-CoV-2/human/AUS/VIC319/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451212 EPI_ISL_420011,2020-03-24,SARS-CoV-2/human/AUS/VIC320/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G C29353T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451213 EPI_ISL_420012,2020-03-24,SARS-CoV-2/human/AUS/VIC321/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C10851T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451214 EPI_ISL_420013,2020-03-24,SARS-CoV-2/human/AUS/VIC322/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T380K A1515G T6079C C9223T G11083T A14224G C14805T T17247C T19893Y G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451215 EPI_ISL_420014,2020-03-24,SARS-CoV-2/human/AUS/VIC323/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G A26864R C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451216 EPI_ISL_420015,2020-03-24,SARS-CoV-2/human/AUS/VIC324/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G A25449G GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451217 EPI_ISL_420016,2020-03-24,SARS-CoV-2/human/AUS/VIC325/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1912Y C3096Y G4298K G11083K G13627K C14805Y C15540Y G26144K A28338R G29212K GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451218 EPI_ISL_420017,2020-03-24,SARS-CoV-2/human/AUS/VIC326/2020,Australia / Victoria ATTAAAGGTT1- C3096T G11083T G13627T C14805T C15540T G26144T A28338G G29212T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451219 EPI_ISL_426637,2020-03-17,SARS-CoV-2/human/AUS/VIC327/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C2558T G11083T C14805T G26144T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451220 EPI_ISL_426638,2020-03-17,SARS-CoV-2/human/AUS/VIC328/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C2558T G11083T C14805T G26144T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451221 EPI_ISL_426639,2020-03-17,SARS-CoV-2/human/AUS/VIC329/2020,Australia / Victoria ATTA1- C241T C482Y G558K G660K G663K G2036K G3004K C3037T C3551Y G3564K G4505K G5384K G5847K G5880K C6468Y G6483K G7038K G8790K G9141K G9249K G10167K G10986K G11535K G12164K G14277K C14408T G14548R G15769K G16068K G17096K G17848K G18318K G20128K A23403G G24557K G24933K G28079K G29779K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451222 EPI_ISL_426640,2020-03-18,SARS-CoV-2/human/AUS/VIC330/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- T490A T658Y C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29700G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451223 EPI_ISL_426641,2020-03-18,SARS-CoV-2/human/AUS/VIC332/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G210K C241Y A2480R C2558Y C3037Y A5058R T7778Y G11083K G11810R C14408Y C14805Y AC19010MM A23403R G24858R G26144K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451224 EPI_ISL_426642,2020-03-18,SARS-CoV-2/human/AUS/VIC333/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C482Y G558K G660K G663K G2036K G2604K G3004K C3037T C3505Y G3564K G5375K G5617K G5880K G6483K G7017K G7038K G7246K G8790K G9141K G9249K G10986K G11535K G12164K G13240K G14277K C14408T G14548R G15199K G15202K G15769K G16188K G16787K G17096K G17848K G18318K G23288K G23343K A23403G G24557K G24933K T25473C T27233Y G28079K G28109K GGG28881AAC TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451225 EPI_ISL_426643,2020-03-19,SARS-CoV-2/human/AUS/VIC334/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451226 EPI_ISL_426644,2020-03-20,SARS-CoV-2/human/AUS/VIC335/2020,Australia / Victoria ATTAAAGGTTTATACCTTC1- C8782T C17747Y A17858G C18060T C24374Y A24694T T28144C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451227 EPI_ISL_426645,2020-03-20,SARS-CoV-2/human/AUS/VIC336/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8782T C17747Y A17858G C18060T A24694T C27999Y T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451228 EPI_ISL_426646,2020-03-20,SARS-CoV-2/human/AUS/VIC337/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T A23403G G26116R C29739T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451229 EPI_ISL_426647,2020-03-20,SARS-CoV-2/human/AUS/VIC338/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- T1570C C8782T T9477A A10323G C14805T G25979T T28144C C28657T C28863T G29705T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451230 EPI_ISL_426648,2020-03-20,SARS-CoV-2/human/AUS/VIC339/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T G3955K T11638C C14408T A23403G C27911Y GGG28881AAC C29708T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451231 EPI_ISL_426649,2020-03-20,SARS-CoV-2/human/AUS/VIC340/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C7011T C14408T C16289T G17058A G19072T A23403G C25006Y G25429T C25624T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451232 EPI_ISL_426650,2020-03-20,SARS-CoV-2/human/AUS/VIC341/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A20268G A23403G A24121G G26814K C28854T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451233 EPI_ISL_426651,2020-03-20,SARS-CoV-2/human/AUS/VIC342/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C3096T G11083T G13627T C14805T C15540T G26144T A28338G G29212T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451234 EPI_ISL_426652,2020-03-20,SARS-CoV-2/human/AUS/VIC343/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C5223T C14408T A20268G A23403G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451235 EPI_ISL_426653,2020-03-20,SARS-CoV-2/human/AUS/VIC344/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C3096T G11083T G13627T C14805T C15540T C21090Y G26144T A28338G G29212T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451236 EPI_ISL_426654,2020-03-20,SARS-CoV-2/human/AUS/VIC345/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G3248A C14408T A18710G A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451237 EPI_ISL_426655,2020-03-20,SARS-CoV-2/human/AUS/VIC346/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C11916Y C14408T C15141Y C18998Y A23403G G25563T G29540R CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451238 EPI_ISL_426656,2020-03-20,SARS-CoV-2/human/AUS/VIC347/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T G2945A C3037T C11916T C14408T A23403G G25563T G26466A CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451239 EPI_ISL_426657,2020-03-20,SARS-CoV-2/human/AUS/VIC348/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C3130T C7843T C14408T T22939C A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451240 EPI_ISL_450213,2020-03-20,SARS-CoV-2/human/AUS/VIC349/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- T490A C3177T C8782T G15093R T18736C G19684T C24034T T26729C C27635T G28077C T28144C A29703G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451241 EPI_ISL_426658,2020-03-20,SARS-CoV-2/human/AUS/VIC350/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C8782T T18736C G19684T C24034T T26729C C27635T G28077C T28144C C29085T A29700G GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451242 EPI_ISL_426659,2020-03-20,SARS-CoV-2/human/AUS/VIC351/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A C10183M T10504Y C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451243 EPI_ISL_426660,2020-03-20,SARS-CoV-2/human/AUS/VIC352/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G285K C482Y G558K G660K G663K G945K G1018K G1440A G2036K G2604K G2891A G3004K C3551Y G3564K G4163K G4505K A4549R G4908K C5221Y G5233R G5880K G6483K G6804K C6968Y G7017K G7038K G7246K G8696K G8790K G9141K G9249K G10754K G10986K G11535K G12164K G13029K G13193K G13571K G13850K G14277K G14428K G14548R G15075K G15199K G15769K G16068K G16188K G16508K G16738K G16741K G16988K G17096K GG17848KK G18318K G19086K G19252K G20128K G21123K G22018K G22257K G23162K G23343K C23763Y G24557K G24933K G25352K G28077K G28079K G28086K G28089K G28517K G28559K G29135K T29699W G29781K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451244 EPI_ISL_426661,2020-03-21,SARS-CoV-2/human/AUS/VIC353/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C8660T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451245 EPI_ISL_426662,2020-03-21,SARS-CoV-2/human/AUS/VIC354/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C4002T G10097A T11278Y C13536T C14184T C14408T C21058T A23403G C23731T G28086T A28811G GGG28881AAC TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451246 EPI_ISL_426663,2020-03-21,SARS-CoV-2/human/AUS/VIC355/2020,Australia / Victoria ATTAAAGGTTTA1- G957A A1547G C8782T C17747Y A17858G C18060T C18264M T28144C GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451247 EPI_ISL_426664,2020-03-21,SARS-CoV-2/human/AUS/VIC356/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6638M C14408T C21742Y A23403G GGG28881AAC TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451248 EPI_ISL_426665,2020-03-21,SARS-CoV-2/human/AUS/VIC357/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C379A C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451249 EPI_ISL_426666,2020-03-21,SARS-CoV-2/human/AUS/VIC358/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G663K G3564K C4540Y C5540Y G5880K C6468Y G6483K G7017K G7214K G7246K C8756Y C8782T G8790K G9141K T9477A G10754K G11535K G12164K G13193K G13240K C14805T G16068K G17096K G17848K C18138M G20128K C21911Y G22018K C23291Y C23410Y G23505K C23766Y G24933B G25352K G25979T T28144C C28311T G28517K C28657T C28863T G29705K ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451250 EPI_ISL_426667,2020-03-22,SARS-CoV-2/human/AUS/VIC359/2020,Australia / Victoria ATTAAAGGTTTATAC1- A1087R C8782T C17010T C17747Y A17858R C18060T T28144C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451251 EPI_ISL_426668,2020-03-22,SARS-CoV-2/human/AUS/VIC360/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGT1- C1059T C3037T G3248A C14408T G15574K G17035K A18710G A23403G G23958K G25563T C27476Y G28162K A28972R CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451252 EPI_ISL_426669,2020-03-22,SARS-CoV-2/human/AUS/VIC361/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGG1- C241T C3037T C3373A C14408T A23403G C23538Y C26895Y C28000T GGG28881AAC CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451253 EPI_ISL_426670,2020-03-22,SARS-CoV-2/human/AUS/VIC362/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T G3259A C14408T C17397T A23403G GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451254 EPI_ISL_426671,2020-03-22,SARS-CoV-2/human/AUS/VIC363/2020,Australia / Victoria AT1- C241T C3037T C14408T G17721K A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451255 EPI_ISL_426672,2020-03-22,SARS-CoV-2/human/AUS/VIC364/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G374A C6936T C8782T C17747Y A17858G C18060T C25546A T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451256 EPI_ISL_426673,2020-03-22,SARS-CoV-2/human/AUS/VIC365/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G957A A1547G C8782T C10036T C17747Y A17858G C18060T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451257 EPI_ISL_426674,2020-03-22,SARS-CoV-2/human/AUS/VIC366/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T G3259A C14408T C17397T A23403G G26814K GGG28881AAC G28904K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451258 EPI_ISL_426675,2020-03-22,SARS-CoV-2/human/AUS/VIC367/2020,Australia / Victoria ATTAAAGG1- C8782T T9477A C14805T G25979T T28144C C28657T C28760A C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451259 EPI_ISL_426676,2020-03-22,SARS-CoV-2/human/AUS/VIC368/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G660K G663K G1406K G2036K G2247K G2604K G3004K C3037T G3259K C3551Y G3564K G4505K A4987G G5155K G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G7363K G8696K G8790K G9141K G9249K G10098K G10101K G10167K G10986K G11535K G12164K G13240K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K G15769K G16188K G16787K G17096K GG17848KK G18297K C18431T G20128K G21281K G22899K G23162K G23288K A23403G G24557K G24933K G26262K G28079K G28109K G28559K G28857R GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451260 EPI_ISL_426679,2020-03-22,SARS-CoV-2/human/AUS/VIC372/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G4309T C5512T C14408T G21724T A23403G T27687C GGG28881AAC CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451261 EPI_ISL_426680,2020-03-22,SARS-CoV-2/human/AUS/VIC373/2020,Australia / Victoria ATTA1- C241T C3037Y C14408Y C18877Y A23403G G25979T T28144Y C28760M C28863Y AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451262 EPI_ISL_426681,2020-03-22,SARS-CoV-2/human/AUS/VIC374/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T G285K C482Y G558K G660K G663K G945K G2036K G2604K G3004K C3037T G3259K G3564K G3896K G4505K G4854K G4908K G5200K G5233R G5617K G5847K G5880K G6170K C6468Y G6483K G6804K G7017K G7038K C7194Y G7214K G7246K G8696K G8790K G9141K G9249K G10098K G10167K G10368K G10754K G10986K G11535K G12041K G12164K G13193K CG13239YK G13571K G13850K G14277K C14408T C14536Y G15199K G15202K G15769K G16068K G16188K G16508K G16741K G16787K G16988K G17096K GG17848KK G18297K G18318K G18653K C18656Y G19086K G19252K G19480K G20126K G20128K A20268G G20627K G21123K C22006Y G22018K G22257K G23288K C23298Y G23302K G23343K A23403G G23505K G23663K C23766Y G24557K G24933K G28077K G28079K G28086K G28089K G28517K G28559K GG29705KK G29779K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451263 EPI_ISL_426682,2020-03-22,SARS-CoV-2/human/AUS/VIC375/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G285K C482Y G558K G660K G663K G945K G1406K G2036K G2604K G3004K C3037T G3564K G3896K G4505K G5233R G5375K T5408Y G5617K G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G7363K G8696K G8787K G8790K C9110Y G9141K G9249K G9802T G10098K G10167K G10754K G10986K G11535K G12041K G12164K G13240K G13571K G14277K C14408T C14536Y G14548R G15199K G15769K G16068K G16787K G17096K G17848K G18297K G18318K G19252K G20128K A20268G G21123K G22018K C23298Y G23343K A23403G C23766Y G24557K G24933K G28077K G28079K G28559K G29779K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451264 EPI_ISL_426683,2020-03-22,SARS-CoV-2/human/AUS/VIC376/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G247T C379A C1059T C3037T C14408T C22224T A23403G G25563T G27163T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451265 EPI_ISL_426684,2020-03-22,SARS-CoV-2/human/AUS/VIC377/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C482Y G558K G660K G663K G2036K G3004K C3037T C3551Y G3564K G5375K G7038K G8790K G9141K G9249K G10986K G11535K G12164K G13571K G14277K C14408T G15769K G17096K G18318K G22018K G22899K G23288K A23403G G24557K G24933K G28079K GGG28881AAC G29254T G29263K G29266K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451266 EPI_ISL_426686,2020-03-22,SARS-CoV-2/human/AUS/VIC379/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G285K G558K G660K G663K G945K G1406K G2036K G2604K G3564K G4505K G5233R C5796Y G5847K G5880K C6468Y G6483K C6695A G6804K G7017K G7038K C7194Y G7214K G7246K G8688K C8756Y C8782T G8790K G9141K G9249K G10098K G10167K G10368K G10754K G11535K G12041K G12164K G13240K G13571K G14277K C14536Y G15769K G16068K G16508K G16787K G16988K G17096K C17747Y A17858G C18060T C18263Y G18297K G18318K G19480K G20128K G21123K G22018K C23291Y G23302K G23343K G23505K C23766Y G24557K A24694T G24933B G25352K G28077K G28079K T28144C G28517K G28559K G29135K G29779K G29781K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451267 EPI_ISL_426687,2020-03-23,SARS-CoV-2/human/AUS/VIC380/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C203Y C241T C1059T C3037T C3714Y C6701Y C13458Y C14408T G18651R C19263T A23403G C23603Y G25563T C28253Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451268 EPI_ISL_426688,2020-03-23,SARS-CoV-2/human/AUS/VIC381/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540Y C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451269 EPI_ISL_426689,2020-03-23,SARS-CoV-2/human/AUS/VIC382/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G285K C482Y G558K G660K G663K G945K G1018K C1059T G1406K G2036K G2604K C3037T G3259K C3505Y C3551Y G3564K G4678A G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G8696K G8790K G9141K G9249K G10098K G10101K G10167K G10986K G11535K G12041K G12164K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K G15769K G16068K G16188K G16508K G16787K G17096K GG17848KK G18170K C18263Y G18297K G18318K G19252K G19480K G21123K C22006Y G22018K G22899K G23162K G23288K G23343K A23403G C23766Y G24557K C24844T G24933K G25352K G25563T G25621K G26262K G28077K G28079K G28517K G28559K G29321K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451270 EPI_ISL_426690,2020-03-23,SARS-CoV-2/human/AUS/VIC383/2020,Australia / Victoria ATTAAA1- C241T C1059T C3037T G5463R C11919T C14408T C21711T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451271 EPI_ISL_426691,2020-03-23,SARS-CoV-2/human/AUS/VIC384/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G17944T A23403G A23922G T25051Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451272 EPI_ISL_426692,2020-03-23,SARS-CoV-2/human/AUS/VIC385/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C482Y G558K G660K G663K G2036K G2604K G3004K G3259K C3365T C3551Y G3564K G4505K G5375K G5378K G5617K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G7363K G8696K G8790K G9141K G9249K G10101K G10167K G10986K G11083T G11535K G12164K G13240K G13571K G14277K G14548R C14805T G15199K G15202K G15769K G16068K G16188K G16787K G17096K G17848K G18297K G18318K G19252K G21123K G22018K G22899K G23162K G23505K C23707T G24557K G24933K G26144T G28077K G28079K G28086K G28559K G29779K G29781K TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451273 EPI_ISL_426693,2020-03-23,SARS-CoV-2/human/AUS/VIC386/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G285K T490W G558K G660K G663K G945K C1912Y G2036K C3177Y C3551Y G3564K G3896K C4084Y G5233R G5345K G5617K G5847K G5880K C6468Y G6483K G7017K G7038K G7214K G7246K G8688K C8756Y C8782T G8790K G9141K G9249K G10098K G10167K G10754K G10986K G11535K G12041K G12164K G13240K G14277K G15769K G16068K G16508K G16787K G17096K C17747Y G17848K A17858R C18060Y G18318K T18736Y G19480K G19679K G19684K G20128K C23291Y G23343K G23505K C23766Y C24034Y G24557K A24694W G24933K G25352K T26729Y G27033K C27635Y G28079K T28144C G28517K C29666Y G29705K T29760Y G29779K G29781K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451274 EPI_ISL_426694,2020-03-23,SARS-CoV-2/human/AUS/VIC387/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K C3037T C3505Y C3551Y G3564K G7038K G8790K G9141K G10986K G11535K G12164K C14408T G17096K G22018K A23403G C23664Y C23766Y G24557K G24933K G28517K G28559K GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451275 EPI_ISL_426695,2020-03-23,SARS-CoV-2/human/AUS/VIC388/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K G1145A G2036K G2101K C2939Y G3004K C3037T G3564K G3689K T5577K G5617K C5796Y G5847K G5880K G8696K G8790K G10590K G10986K G11535K G12164K G13571K G13729K G14277K C14408T G14548K G15075K G15769K G17096K G20128K G23343K A23403G G24557K G24933K G25352K G27906T G28079K GGG28881AAC G29348K A29676R G29736K G29800S G29828K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451276 EPI_ISL_426696,2020-03-23,SARS-CoV-2/human/AUS/VIC389/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- G285K C482Y G558K G660K G663K G945K G1406K G2036K G2604K G3004K G3259K C3551Y G3564K G3896K G5155K G5233R G5375K G5378K G5617K C5796Y G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G8696K G8787K G8790K C9110Y G9141K G9249K G10098K G10101K G10167K G10754K G10986K G11083T G11535K G12041K G12164K G13193K G13240K G13571K G14277K C14536Y G14548R C14805T G15199K G15202K G15769K G16068K G16188K G16508K G16787K G16988K G17096K T17247C G17848K G18297K G18318K G19252K G20128K G22018K G22899K G23288K C23298Y G23302K G23343K G23505K C23766Y G24557K G24933K G26144T G26262K G28077K G28079K G28109K G28559K GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451277 EPI_ISL_426905,2020-03-23,SARS-CoV-2/human/AUS/VIC390/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6310A C6312A G11083T G12685T C13730T C15656T G20398R C23929T C28311T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451278 EPI_ISL_426697,2020-03-24,SARS-CoV-2/human/AUS/VIC394/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G660K G663K G2604K G3004K C3037T C3373A C3551Y G3564K G5332K G5880K G7017K G7038K G7246K G8790K G9141K G9249K G10986K C11195T G11535K G12164K G13571K G14277K C14408T G14548R G15769K G17096K A17940W G19252K G21123K A23403G G24557K G24933K G28079K G28089K G28559K GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451279 EPI_ISL_426698,2020-03-24,SARS-CoV-2/human/AUS/VIC395/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G285K C482Y G558K G660K G663K G945K G1018K C1059T G1406K G2036K T2561C G2604K G3004K C3037T G3259K C3505Y C3551Y G3564K G3896K G5233R C5348Y G5354K G5375K G5617K C5796Y G5847K G5880K C6468Y G6483K G6804K G7017K G7038K C7194Y G7214K G7246K G7363K G8696K G8787K G8790K G9141K G9249K G10098K G10101K G10167K G10266K G10675K G10754K G10986K G11417K G11535K C11916T G12041K G12164K G13240K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K G15769K G16068K G16188K G16508K G16787K G17096K GG17848KK G18170K C18263Y G18297K G18318K C19018T G19086K G19252K G19480K G19679K G20128K G21123K G22018K G22859K G22899K G23162K G23288K G23343K A23403G G23505K C23766Y G24557K G24933K G25352K G25563T G25621K G26262K G28077K G28079K G28086K G28089K G28517K G28559K G29321K G29348K TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451280 EPI_ISL_426700,2020-03-24,SARS-CoV-2/human/AUS/VIC397/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C482Y G558K G660K G663K G3004K G3259K G3564K G5155K G5847K G5880K C6312A C6468Y G6483K G7017K G7038K G7214K G8790K G9141K G9249K G10167K G10754K G10986K G11535K G12164K G13240K G13571K G13726K C13730T G14277K G15769K G16068K G16325K G16741K G17096K G17849K C19185Y G20128K G22018K G23505K C23929T G24557K G24933K C27294Y G28077K G28079K C28311T G29779K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451281 EPI_ISL_426701,2020-03-24,SARS-CoV-2/human/AUS/VIC398/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K C3037T G3564K G7038K G8790K G9141K G9249K G12164K C14408T A23403G G24557K G24933K A26530G G28079K TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT451282 EPI_ISL_426702,2020-03-24,SARS-CoV-2/human/AUS/VIC399/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G660K G663K G1406K G2036K G2604K G3004K C3037T G3564K G5155K G5378K G5617K C5796Y G5847K G5880K C6468Y G6483K G7017K G7038K C7194Y G7214K G7246K G8787K G8790K G9141K G9249K G10098K G10754K G10986K G11535K G12041K G12164K G13193K G13240K G13571K G14277K C14408T G14548R C15324T G15769K G16068K G16988K G17096K G17848K G18297K G20128K G23288K C23298Y G23302K G23343K A23403G G24557K G24933K C25710T G26262K G28077K G28079K G28559K G29779K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451283 EPI_ISL_426705,2020-03-24,SARS-CoV-2/human/AUS/VIC402/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G285K G553K G558K G663K C841Y G945K G1018K C1059T G1181K G1406K G1488K G1607K G2036K G2247K G2250K G2381K G2604K G2769K G3004K C3037T G3050K G3259K C3501Y A3504W G3564K G3731K G3896K G4505K G4854K C5140Y GG5155KK G5196K G5200K C5221Y G5233R G5375K G5384K C5427Y G5617K C5796Y C5826Y G5847K G5880K G6170K G6446K C6468Y G6483K G6804K C6968Y G7017K G7038K G7214K G7246K G7363K G8027K G8075K G8372K G8459K G8688K G8696K G8787K G8790K G8901K C9110Y G9141B G9950K G10059K GG10097KK G10101K G10157K G10167K C10198Y G10266K G10368K G10675K G10754K G10996K G11115K G11417K G11535K G11693K G12041K G12164K G12491K G12578K G12833K G13161K G13193K CG13239YK G14188K G14197K G14277K C14408T C14536Y G15075K G15199K G15202K G15287K G15380K G15769K G16068K G16188K G16436K G16442K G16508K C16646Y G16663K G16696K G16741K G16787K G16988K G17096K G17722K C17831Y GG17848KK G17915K C18138M G18170K C18263Y G18297K G18318K G18445K G18449K G18948K G18951K G19086K G19219K G19250K G19252K G19446K G19478K G19480K G19627R G19679K G19802K G20126K G20128K G20627K G20922K C21090Y G21100K G21123K G21786K G22018K G22257K G22859K G23016K G23090K G23162K CG23291YK C23298Y C23300Y G23302K G23343K A23403G G23505K G23519K G23663K C23745Y C23766Y CG23855YK G23873K G24557K G24933B G25013K G25305K G25354K G25563T G25621K G26031K G26428K G27033K G27366K G27506K G27602K G27604K G28077K G28079K G28086K G28089K G28109K G28180K G28476K G28517K G28559K G29135K G29321K G29348K C29364T G29703K G29705K G29779K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451284 EPI_ISL_426707,2020-03-24,SARS-CoV-2/human/AUS/VIC404/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C482Y G558K G2036K G2604K C3037T C3551Y G3564K G4505K G7038K G7246K G8790K G9249K G11535K G12164K C14408T G15769K G18318K G22899K A23403G G24557K G24933K G27358T GGG28881AAC GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451285 EPI_ISL_426708,2020-03-25,SARS-CoV-2/human/AUS/VIC406/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C482Y G558K G660K C1076T G1397A G2036K G2604K C3551Y G3564K G4505K G5924K G6483K G7038K G8550K G8790K G9249K G11083T G11535K G12164K G14277K G14548R G15769K G16787K G17096K G18318K G19006K G19009K G19480K G22899K G24557K G24933K C27964T G28079K G28517K G28559K T28688C G29321K G29742T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451286 EPI_ISL_426709,2020-03-25,SARS-CoV-2/human/AUS/VIC407/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C482Y G558K G660K C1076T G1397A G2036K G2604K G3004K G3564K G4505K G5375K G5880K G7038K G7246K G8790K G9249K G10986K G11535K G12164K G13571K G14548R G15199K G15769K G17096K G22018K G22661T G22899K G23162K G24557K G24933K C27964T G28079K G28559K T28688C G29321K G29742T G29779K G29781K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451287 EPI_ISL_426710,2020-03-26,SARS-CoV-2/human/AUS/VIC408/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T G680A C3037T C14408T A23403G T25811Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451288 EPI_ISL_426711,2020-03-26,SARS-CoV-2/human/AUS/VIC409/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451289 EPI_ISL_426713,2020-03-26,SARS-CoV-2/human/AUS/VIC413/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G285K G553K G558K G663K G945K G1018K G1074K G1406K G1488K G1607K G2036K G2101K G2381K G2604K G2769K G3004K C3037T G3050K G3179K TG3211KR G3216K G3251K G3259K C3480Y C3501Y A3504W G3564K G3896K G4488K G4505K G4854K G4908K G5155K G5200K C5221Y G5233R G5354K G5375K G5617K C5796Y C5826Y G5847K G5880K G6446K C6468Y G6483K G6804K G7010K G7017K G7038K G7214K G7246K G7363K G7805R G8459K G8678R G8688K G8696K G8787K G8790K G8943K C9110Y G9141K G9249K G10098K G10167K G10266K G10368K G10675K G10754K G11392K G11417K G11535K G12041K G12160K G12164K G12491K G12833K G13161K G13193K CG13239YK G13850K G14188K G14197K A14261W G14277K C14408T C14536Y G15075K G15199K G15202K G15769K G16068K G16188K G16436K C16466Y G16508K C16626Y G16738K G16741K G16787K G16988K G17096K C17518Y G17668K G17716K C17831Y GG17848BK C18263Y G18297K G18318K G18445K G19086K G19250K G19252K G19388K G19446K G19478K G19480K G19582K G19679K G20128K G20627K G20915K G20922K G21123K G21281K G21307B C21716Y G22018K G22257K G22859K G22899K G22933K G23016K G23162K C23291Y C23298Y G23302K G23343K A23403G G23663K A23738W C23745Y C23766Y G23768K G23775K CG23855YK G23873K G24497K G24557K G24933K G25352K T25612C G25621K C25936Y G26428K G27033K G27366K G27506K G27602K G28079K G28086K G28089K G28109K G28517K G28559K G28781K G29348K GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451290 EPI_ISL_426714,2020-03-26,SARS-CoV-2/human/AUS/VIC414/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C5842T T7438C C14408T A23403G C29085Y C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451291 EPI_ISL_426715,2020-03-25,SARS-CoV-2/human/AUS/VIC415/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451292 EPI_ISL_426716,2020-03-23,SARS-CoV-2/human/AUS/VIC416/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T1368C G3354K C6990T T7763Y G14272K C14805T G17259T C19018T C20736T A22237W T22239W C23707T G26144T T27698W C27998M G28195K GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451293 EPI_ISL_426717,2020-03-25,SARS-CoV-2/human/AUS/VIC417/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T C23054H A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451294 EPI_ISL_426719,2020-03-25,SARS-CoV-2/human/AUS/VIC419/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T78W A220W C241T C346Y G374K G407K G472K C492Y C560Y C657Y G701K C815Y G1200S C1449T G1595K C1762Y G1827K A1981W G2017S C2113Y G2873K C3037T T4064Y G4136K A4498M G4852K G6530K T6547Y T7288Y T7317Y G7393R T7438C C8079Y G8084R C8157Y G8375K C9448Y T9986Y G10160S T11116Y C11190Y G11242K C11249Y T11619Y C12353Y C14408T A15325W T15330Y G16618R A16682M T17796Y G19657K T20177Y T20537Y T20966Y T21144Y A21308R C22663Y A23403G G23519K C23785Y G24546K G24764K C26351Y T26590W A26864G A26910M A26965R C27015Y G27126K T27138K T27374Y C27542Y G27544S T27682Y C27739Y G27758K G29033K C29353T C29466Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451295 EPI_ISL_426721,2020-03-25,SARS-CoV-2/human/AUS/VIC421/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T G19656T A22231R A23403G A26487- C27046T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451296 EPI_ISL_426722,2020-03-25,SARS-CoV-2/human/AUS/VIC422/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T2301Y C3096T T9776Y C12781T G13627T C14805T C15540T G17944T C18232Y G20925K C23897Y G25273T G26144T C26958Y C27644Y A28338G T28902C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451297 EPI_ISL_426723,2020-03-25,SARS-CoV-2/human/AUS/VIC423/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C100Y G2659S G3638K T5705W C14666S C17586Y C17747Y A17858G C18060T G24050K G25074K T28144C TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451298 EPI_ISL_426724,2020-03-25,SARS-CoV-2/human/AUS/VIC424/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T AAGTCATTT686- A2315R C3037T G3179K A3870R G3939R A4079M G6902K G7667S T8822W G10739K C11022Y G11123K C13862Y C14195Y C14408T G14432R G14624K C17430Y C17891Y C18877T C19983Y T20502Y G21224R G22627R A23403G G25563T G25687K T27170Y T29317Y G29494K ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451299 EPI_ISL_426725,2020-03-25,SARS-CoV-2/human/AUS/VIC425/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C10851T C14408T G20931T A23403G C23439T G25563T G29030K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451300 EPI_ISL_426726,2020-03-25,SARS-CoV-2/human/AUS/VIC426/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- C1912Y A2480G C2558T G11083T C14805T A21137R G26144T T26593Y G27478T C28534Y G29033R CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451301 EPI_ISL_426727,2020-03-25,SARS-CoV-2/human/AUS/VIC427/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2507T C3037T C3373A C14408T A23403G GGG28881AAC TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451302 EPI_ISL_426728,2020-03-25,SARS-CoV-2/human/AUS/VIC428/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- A2480G C2558T T11075Y G11083T C14805T A21137G G26144T G27478T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451303 EPI_ISL_426729,2020-03-26,SARS-CoV-2/human/AUS/VIC429/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C10851T C14408T G20931T A23403G C23439T G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451304 EPI_ISL_426730,2020-03-26,SARS-CoV-2/human/AUS/VIC430/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C635Y C6695A C8782T A17460R C17747T A17858G C18060T A24694T T28144C G29000T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT451305 EPI_ISL_426731,2020-03-25,SARS-CoV-2/human/AUS/VIC431/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C506Y C1059T C3037T T4101Y G5704K C14178Y C14408T T15528Y A23148R A23403G G25204K G25563T T28756Y ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451306 EPI_ISL_426732,2020-03-25,SARS-CoV-2/human/AUS/VIC433/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C657Y C999Y C1288Y C1931Y C1938Y C2061Y C3140Y C3177Y C3817Y C4540T C6285Y C6813Y C7382Y T7730Y C8626Y C8782T C8873Y T9477A C10422Y C11919Y C12438Y C14805T C15509Y C15848Y C15857Y C16178Y C16699Y C16792Y C17410Y C17421Y C17678Y C18289Y C18322Y C18572Y T18909Y C19269Y C19290Y C19322Y C19366Y C19512Y C19572Y C19910Y C21145Y C21260Y C21476Y C21933Y C22000Y C22295Y C22858Y C22875Y T22903W C22987Y A23003R C23082H C23154Y C23481Y C23816Y C23895Y C24026Y C24138Y C25006Y C25626Y G25979T C26270Y C26542Y C27046Y C27167Y C27509Y T28144C C28311T C28657T C28751Y C28863T C29057Y C29061Y C29073Y C29087Y C29120Y C29137Y G29162K C29253Y C29318Y C29769Y CCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29835- >MT451307 EPI_ISL_426733,2020-03-25,SARS-CoV-2/human/AUS/VIC434/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C346Y C1288Y C1568Y C1931Y C1938Y C2061Y C2691Y C3140Y C3176Y C3501Y C3634T C3817Y C3923Y C4965Y C4980Y C4990Y C5597Y C6224Y C6285Y C6336Y C6471Y C6781Y C7262Y C8299Y C8668Y C8782T C8809Y C8820Y C8836Y C8841Y C8922Y C8950Y C10422Y C10718Y C10833Y C12213Y C12398Y C12438Y C13356Y C13443Y C13536Y C15509Y C15848Y C15857Y C16178Y C16792Y C17410Y C17678Y C17710Y C17747T C17845Y A17858G C18060T C18289Y C18647Y C19255Y C19273Y C19322Y C19572Y C19910Y C20148Y C20199Y C21145Y C21173Y C21216Y C21242Y C21260Y C21263Y G21354K C21933Y C22000Y C22295Y C22323Y C22875Y C22982Y C22986Y C23481Y C23895Y C24026Y C24138Y C25006Y C25642Y C25703Y C25708Y C25738Y C25844Y C25886Y C26270Y C26333Y C26405Y C26542Y C27503Y C27509Y T28144C C28603Y C28751Y C28923Y C29037Y CA29187YR C29236Y AC29761- CCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29835- >MT451308 EPI_ISL_426734,2020-03-26,SARS-CoV-2/human/AUS/VIC437/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6723T C14408T A23403G T26094C C29614Y GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451309 EPI_ISL_426735,2020-03-26,SARS-CoV-2/human/AUS/VIC438/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T GTT521- C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451310 EPI_ISL_426736,2020-03-26,SARS-CoV-2/human/AUS/VIC439/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451311 EPI_ISL_426737,2020-03-26,SARS-CoV-2/human/AUS/VIC440/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C593Y C3037T G10310A C14408T A23403G C25350T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451312 EPI_ISL_426738,2020-03-27,SARS-CoV-2/human/AUS/VIC441/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1044Y C3037T G3286R G12569K G13379S C14408T C14805Y G15007K A20268G A23403G G28048K G28576S CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451313 EPI_ISL_426739,2020-03-27,SARS-CoV-2/human/AUS/VIC442/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- A187G C241T C2536Y C3037T A13058R C14408T A23403G TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451314 EPI_ISL_426740,2020-03-27,SARS-CoV-2/human/AUS/VIC443/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2919Y C3037T C14408T C16349Y C19488M A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451315 EPI_ISL_426743,2020-03-27,SARS-CoV-2/human/AUS/VIC447/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A T9037C C11832T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451316 EPI_ISL_426744,2020-03-24,SARS-CoV-2/human/AUS/VIC448/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGA1- C241T C1059T C3037T C5768Y G13379S C14408T A23403G G25563T G25879T C28826Y G28968K TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451317 EPI_ISL_426745,2020-03-24,SARS-CoV-2/human/AUS/VIC449/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C15324T G15982T A23403G C23506Y G25522R G28233T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451318 EPI_ISL_426746,2020-03-25,SARS-CoV-2/human/AUS/VIC450/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G4162T C14408T A23403G G24368T G25563T G29195B AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451319 EPI_ISL_426747,2020-03-25,SARS-CoV-2/human/AUS/VIC451/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G A26530G G29779T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451320 EPI_ISL_426748,2020-03-25,SARS-CoV-2/human/AUS/VIC452/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G578K G674K C1059T G2323R T2545Y C3037T T4660Y T5349Y T9139Y C9474Y C9491Y G10400S G12248R C14408T T16836Y A18039W C18656Y T20061W T20708Y G21430K C21711T C22281Y A23403G G25563T G28593K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451321 EPI_ISL_426749,2020-03-25,SARS-CoV-2/human/AUS/VIC453/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C304T C337Y C601Y C1059T C3037T G13900T C14408T A23403G G25563T G27505K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451322 EPI_ISL_426750,2020-03-25,SARS-CoV-2/human/AUS/VIC454/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- T1368C C6990T G11083T C14805T C20736T C23707T C23996T G25598T G26144T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451323 EPI_ISL_426751,2020-03-25,SARS-CoV-2/human/AUS/VIC456/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G11083T C14805T T17247C T22328Y G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451324 EPI_ISL_426752,2020-03-26,SARS-CoV-2/human/AUS/VIC458/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C18877T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451325 EPI_ISL_426753,2020-03-26,SARS-CoV-2/human/AUS/VIC460/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T G11083K C14408T A23403G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451326 EPI_ISL_426754,2020-03-27,SARS-CoV-2/human/AUS/VIC461/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C18680T C21219Y A23021R C23929T C28311T A29086R ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451327 EPI_ISL_426755,2020-03-27,SARS-CoV-2/human/AUS/VIC462/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T TGGTCATGT508- C2416T C3037T T3356Y A3948R A4049R A5715R T6893Y AG7177WR G8371T A10978R C14408T C14688T G18903K A23403G T23850W A24037R G25019K C25373S G25563T G27613K C28388Y G28526K C28732Y T29344W TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451328 EPI_ISL_426756,2020-03-26,SARS-CoV-2/human/AUS/VIC463/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C21648T A23403G C23673T G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451329 EPI_ISL_426757,2020-03-26,SARS-CoV-2/human/AUS/VIC464/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATC1- C241T G558K G660K G1074K G1421A C3037T G3085K A3740M G4841R G5375K G5554K A6517W G7038K T7438C T9401Y A9873R G10571K T10663K G10739K G11535K C11779M T12486Y C14183Y T14401Y C14408T G14548R C14614Y A14836M T14853Y G15318K T16295Y C16937Y G17562K G17849K G19082K C19615Y C22890S A23403G G23821K G23867K G24933K T25689Y C27393Y C29007Y C29353T A29723- G29810T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451330 EPI_ISL_426758,2020-03-27,SARS-CoV-2/human/AUS/VIC465/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C233Y C241T G613A G2076S G2468S C3037T G3839R T7018K C7039Y G8084R C14408T G19480K A20265W A23056W A23064W C23078M A23403G T23695Y C25521Y G25947K T26298Y C28253Y G28979R CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451331 EPI_ISL_426759,2020-03-27,SARS-CoV-2/human/AUS/VIC466/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6433M C14408T A19321H G20213R A20268G A23403G A24121G C25275Y G25641K C28854T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451332 EPI_ISL_426760,2020-03-27,SARS-CoV-2/human/AUS/VIC467/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C6723T C14408T A23403G T26094C A29031W TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451333 EPI_ISL_426762,2020-03-26,SARS-CoV-2/human/AUS/VIC470/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C203Y C952Y G957A C1288Y A1547G C1601Y C1938Y C2223Y C3173Y C3501Y C3817Y C4980Y C4990Y C5291Y C6230Y C6384Y C6843Y C8626Y C8782T C9240Y C10422Y C11022Y C11902Y C12438Y C13957Y C14235Y C14573Y C15857Y C16178Y C16637Y C16792Y C17410Y C17430Y C17461Y C17573Y C17747T A17858G C18060T C18647Y C19259Y C19269Y C19273Y C19910Y C20206Y C21145Y C21431Y C21476Y C21678Y C21933Y C22000Y C22009Y C22214Y C22295Y C22858Y C22875Y C23099Y C23141Y C23481Y C23816Y C24134Y C24138Y C25006Y C25665Y C25669H C25672Y C25685Y C25710Y C25728Y C25731Y C25749Y C25821Y C25854Y C26270Y C26276Y C26447Y C26521Y C26542Y C27213Y C27509Y T28144C C28310Y C28728Y C28754Y C28958Y C29028Y C29034Y C29037Y C29057Y C29085T C29835Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451334 EPI_ISL_426906,2020-03-28,SARS-CoV-2/human/AUS/VIC473/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C313T C3037T C6395T C14408T A23403G G28851T GGG28881AAC ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451335 EPI_ISL_426907,2020-03-28,SARS-CoV-2/human/AUS/VIC475/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C664Y C3037T T7438C C14408T A23403G C23692Y T24152C C29304M C29353T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451336 EPI_ISL_426908,2020-03-28,SARS-CoV-2/human/AUS/VIC476/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T G285A C3037T T7438C C14408T T15166C A22911R A23403G G26284K A26864G C27600T A29015W C29353T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451337 EPI_ISL_426909,2020-03-28,SARS-CoV-2/human/AUS/VIC477/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T T7438C C14408T T15166Y C20762Y A23403G A26864R G29032K C29353T C29523Y CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451338 EPI_ISL_426910,2020-03-28,SARS-CoV-2/human/AUS/VIC478/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T T7438C C14408T T15166C A23403G A26864G G29175R C29353T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451339 EPI_ISL_426911,2020-03-28,SARS-CoV-2/human/AUS/VIC479/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C2485Y C3037T T3797K T7438C C14408T T15166C C15720T A23403G T23473Y A25765W A26864G C29353T T29515K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451340 EPI_ISL_426912,2020-03-29,SARS-CoV-2/human/AUS/VIC481/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C635Y C1489T C2644Y C3037T C11824Y C14408T C17766T A20268G A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451341 EPI_ISL_426914,2020-03-29,SARS-CoV-2/human/AUS/VIC483/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C4002T A4490R G10097A C10209M C13536T C14408T G21538T A23403G C23731T GGG28881AAC C29774T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451342 EPI_ISL_426915,2020-03-29,SARS-CoV-2/human/AUS/VIC484/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A4396R T13137Y C14408T A20268G A23403G A23848M T25464Y T25938W CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451343 EPI_ISL_426916,2020-03-29,SARS-CoV-2/human/AUS/VIC485/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T3973Y G4136K C5147Y T7438C C13454Y C14408T T15166C G22147K A23403G T25929Y A26864G C29353T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451344 EPI_ISL_426917,2020-03-29,SARS-CoV-2/human/AUS/VIC486/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C241T C3037T T7438C C14408T T15166C A19799R A23403G A26864G C29353T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451345 EPI_ISL_426918,2020-03-29,SARS-CoV-2/human/AUS/VIC487/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C1150T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451346 EPI_ISL_426919,2020-03-29,SARS-CoV-2/human/AUS/VIC488/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C A23403G A26864G C29353T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451347 EPI_ISL_426920,2020-03-29,SARS-CoV-2/human/AUS/VIC489/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C3037T C14408T A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451348 EPI_ISL_426921,2020-03-30,SARS-CoV-2/human/AUS/VIC490/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T T7438C C14408T T15166C C15720T A23403G A26864G C29211Y C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451349 EPI_ISL_426922,2020-03-30,SARS-CoV-2/human/AUS/VIC491/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T T7438C C14408T T15166C C15720T A23403G A26864G C29353T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451350 EPI_ISL_426765,2020-03-23,SARS-CoV-2/human/AUS/VIC492/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C110Y G285K G558K G660K G663K G1406K G1488K G2036K G2247K G2604K G3004K G3259K C3501Y G3564K G4505K G4854K G5155K G5196K G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K G7214K G7246K G7363K G8688K G8696K G8790K G8943K G8999K G9141K G9249K G10098K G10101K G10167K G10266K G10754K G11392K G11535K G12164K G13161K G13193K CG13239YK G13571K G14277K C14536Y C14805T G15199K G15202K G15769K G16068K G16188K G16741K G16787K G16988K G17096K GG17848KK C18138M G18297K G18318K G19086K G20128K G21123K G21281K C21716Y G22018K G22899K G23162K C23291Y G23343K G23505K G23663K C23766Y C23855Y G24557K G24933K G25352K G25621K G26144T G26262K C26606T G28077K G28079K G28109K G28517K G28559K G28842T T29207Y G29348K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451351 EPI_ISL_426766,2020-03-22,SARS-CoV-2/human/AUS/VIC493/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G285K G558K G660K G663K G945K G1018K C1059T G1406K G2036K G2604K C3037T G3259K C3501Y C3505Y G3564K G4505K G4854K G5233R G5375K G5847K G5880K G7017K G7038K C7194Y G7214K G7246K G8696K G8787K G8790K C9110Y G9141K G9249K G10101K G10167K G10266K G10754K G10986K G11083K G11535K G12041K G12164K G13571K G14277K C14408T C14536Y G14548R C15154T G15769K G17096K G17848K C18138M G18297K G18318K G19086K A20755C G21281K G22018K G23108K G23162K G23288K C23298Y G23343K A23403G C23745Y C23766Y G24557K G24933K G25563T G26262K G28077K G28079K G28109K G28517K G28559K A29006M G29321K G29781K GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451352 EPI_ISL_426768,2020-03-23,SARS-CoV-2/human/AUS/VIC495/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C5211T C14408T C17985Y A23403G C23423T C24844T G25563T G29097K C29353T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451353 EPI_ISL_426769,2020-03-23,SARS-CoV-2/human/AUS/VIC496/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C313T C3037T C14408T A23403G GGG28881AAC C29614T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451354 EPI_ISL_426771,2020-03-23,SARS-CoV-2/human/AUS/VIC498/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G660K C1059T G2036K G2604K G3004K C3037T G3259K G3564K G4505K G5233R G5375K G5880K C6468Y G6483K G7038K G7214K G7246K G7363K G8790K G9141K G9249K C10851T G10986K G11535K G12164K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K G15769K G16188K G16787K G17096K G17849K G18297K G19086K G19252K G22018K G22899K G23162K A23403G C23766Y G24557K G24933K G25563T G28077K G28079K G28086K G28109K G28559K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451355 EPI_ISL_426772,2020-03-24,SARS-CoV-2/human/AUS/VIC500/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C7108Y C7764Y G11534A C14408T C22476Y A23403G G27703T GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451356 EPI_ISL_426775,2020-03-23,SARS-CoV-2/human/AUS/VIC504/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6723T C14408T G22801K A23403G T26094C G28827K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451357 EPI_ISL_426778,2020-03-23,SARS-CoV-2/human/AUS/VIC508/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G285K G558K G660K G1018K G1406K G1607K G2036K G2101K G2250K G2604K C3037T G3479K C3505Y G3564K G3731K G4505K G4854K C5170Y G5375K G5847K G5880K C6468Y G6804K G7017K G7038K C7194Y G7214K C7967S T8815Y G8817K G8925K G8943K G9141K G10098K G10122K G10986K G11115K G11535K G12041K G12164K G13505K G13571K G13624K G14277K C14408T G14428K G14548R G15025K G15575K G15769K G16068K G16508K G16988K G17096K G18170K G18318K G18643K G18677K G19009K G20128K G20627K G22018K G22364K G23162K A23169M C23300Y G23343K A23403G C23492Y G23856K G24102K G24145K G24557K G24933K G25352K C25976Y C27046T G28079K G28559K A28680R C28720Y A28792W GGG28881AAC G29348K G29449K G29737K C29769Y G29781K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451358 EPI_ISL_426789,2020-03-23,SARS-CoV-2/human/AUS/VIC520/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G285K C482Y G558K G660K G663K G2036K G2604K G3004K C3037T G3259K C3505Y G3564K G4505K G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K C7194Y G7214K G7246K T7438C G8696K G8790K G9141K G9249K G10167K G10754K G10986K G11392K G11535K G12041K G12164K G13161K G13193K G13240K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K G15769K G16188K G16787K G17096K GG17848KK G18297K G18318K G19086K G19252K G20128K G21123K G22018K C22376Y C22458Y G22484K G23162K G23288K G23343K A23403G C23766Y G24557K G24933K G26262K G28077K G28079K G28086K G28089K G28109K G28559K C29353T G29779K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451359 EPI_ISL_426791,2020-03-24,SARS-CoV-2/human/AUS/VIC523/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C364Y C478M G728D C745S C1221Y G2769K C3037T G4288K T5290Y C5298Y C5339Y G7038K G7214K G7517K G8943K C9051Y C9763Y G10154K G10157K G10575K C10628Y G10675K G10959S T11920W G12355K C14408T G15476K G16188R G16246K C16648Y C16887Y C17440Y G18318K C19018Y G19627D G19679K T21011K T21326W C22560M G23292K A23403G T23467Y T24412Y T24763Y G24776R G24933K T25612Y C25936Y G28079K C28606S CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451360 EPI_ISL_426792,2020-03-24,SARS-CoV-2/human/AUS/VIC525/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G558K A975M G2036K G2604K C3365T G3564K G4505K G5924K G8550K G8790K G11535K G14277K C14805T G15769K G17096K G17848K G19006K G19009K C23707T G24933K G26144T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451361 EPI_ISL_426793,2020-03-24,SARS-CoV-2/human/AUS/VIC527/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6723T C14408T A23403G T26094C TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451362 EPI_ISL_426794,2020-03-24,SARS-CoV-2/human/AUS/VIC528/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C1938Y C4073Y A16319R A17858G C18060T A21355W C21614T A24694T G25720K T26067Y C27527M T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451363 EPI_ISL_426795,2020-03-24,SARS-CoV-2/human/AUS/VIC529/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T G13624K C14408T A23403G G25563T G26951A C27657Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451364 EPI_ISL_426796,2020-03-23,SARS-CoV-2/human/AUS/VIC530/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C4809T C14408T A23403G A26530G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451365 EPI_ISL_426797,2020-03-24,SARS-CoV-2/human/AUS/VIC531/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C10851T C14408T A23403G G25563T C28776Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451366 EPI_ISL_426798,2020-03-23,SARS-CoV-2/human/AUS/VIC532/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G374A C398Y C6936T C8782T C17747Y A17858G C18060T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451367 EPI_ISL_426799,2020-03-24,SARS-CoV-2/human/AUS/VIC533/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1392T C3037T G3251T C14408T A23403G G25563T C26625T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451368 EPI_ISL_426800,2020-03-25,SARS-CoV-2/human/AUS/VIC534/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C527Y C3037T C6330S A6444R T7438C A8811W G9479K C14408T C17410Y T17872Y A23403G A26864G C29353T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451369 EPI_ISL_426802,2020-03-24,SARS-CoV-2/human/AUS/VIC536/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G285K C482Y G558K G660K G663K G945K G1406K G2036K G2381K G2604K G3004K C3037T G3259K C3505Y G3564K G4505K G4854K G4908K G5155K C5221Y G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K G7214K G7246K G7363K G8696K G8790K G8999K G9141K G9249K G10167K G10266K G10698K G10754K G10986K G11392K G11535K G12041K G12164K G12491K G13161K G13193K CG13239YK G13571K G14277K C14408T G14428K C14536Y G14548D G15075K G15199K G15202K G15769K G16068K G16188K G16741K G16787K G16988K G17096K GG17848KK C18138M G18297K G18318K G19086K G19252K G20128K G21123K G22018K G22859K G22899K G23162K G23288K G23343K A23403G C23766Y C23855Y G24557K G24933K G25621K G26262K A26530G G28077K G28079K G28086K G28089K G28109K G28559K G29072K G29210K G29348K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451370 EPI_ISL_426804,2020-03-23,SARS-CoV-2/human/AUS/VIC538/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C482Y G558K C1059T G2036K C2523T T2587Y C3037T C3551Y G3564K G4505K G7038K G8790K G9249K G12164K C14408T G15769K G18318K G22899K A23403G G24933K G25563T G28079K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451371 EPI_ISL_426806,2020-03-24,SARS-CoV-2/human/AUS/VIC541/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G285K C482Y G558K G660K G663K G2036K G2604K G3004K C3037T G3564K G4505K G4908K G5375K G5880K C6468Y G6483K G6804K G7017K G7038K G7246K G8790K G9141K G9249K G10698K G10986K G11535K G12164K G13571K G14277K C14408T C14536Y G14548R G15199K G15202K C15324T G15769K G17096K G17849K G18297K G19086K G19252K G21123K G22018K G23162K A23403G C23766Y G24557K G24933K G28077K G28079K G28086K G28089K G28559K G29135K G29321K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451372 EPI_ISL_426807,2020-03-23,SARS-CoV-2/human/AUS/VIC544/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C241T C1059T C2523T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451373 EPI_ISL_426808,2020-03-24,SARS-CoV-2/human/AUS/VIC545/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T A2018G C3037T A3940R C14408T C20628Y A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451374 EPI_ISL_426809,2020-03-24,SARS-CoV-2/human/AUS/VIC546/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C1392T C3037T G3251T G13379S C14408T C21772Y A23403G G25563T C26625T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451375 EPI_ISL_426810,2020-03-25,SARS-CoV-2/human/AUS/VIC547/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A T9037C C11832T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451376 EPI_ISL_426811,2020-03-25,SARS-CoV-2/human/AUS/VIC548/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G7042T C14408T A23403G GGG28881AAC A29086M CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451377 EPI_ISL_426812,2020-03-23,SARS-CoV-2/human/AUS/VIC549/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G101A C241T G285K G558K G660K G663K C1059T G1406K G1488K G2036K G2381K G2604K G3004K C3037T G3259K C3501Y A3504W G3564K G4505K G4854K G5155K G5233R G5375K G5378K G5617K G5847K G5880K C6468Y G6483K C6504Y G6804K G7017K G7038K G7214K G7246K G8696K G8787K G8790K G8999K G9141K G9249K G10101K G10167K G10754K G10986K G11392K G11535K C11916T G12041K G12164K G13161K G13193K CG13239YK G13571K G14277K C14408T C14536Y G15199K G15202K G15769K G16068K G16188K G16787K G16988K G17096K G17848K C18138M G18297K G18318K G19086K G19252K G20128K G21123K G22018K G22859K G23162K C23291Y G23343K A23403G C23766Y C23855Y G24557K G24933K G25352K G25563T G25621K G26262K G28077K G28079K G28109K G28559K G29348K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451378 EPI_ISL_436689,2020-03-23,SARS-CoV-2/human/AUS/VIC550/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G558K G2036K G2604K G3564K G4505K C6312A G7038K G8550K G8790K G9249K G11535K G12164K C13730T G14277K G15769K G17096K G18318K G19006K G19009K G22331K G22899K G23505K C23929T G24557K G24933K C28311T G28517K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451379 EPI_ISL_426813,2020-03-25,SARS-CoV-2/human/AUS/VIC551/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T G285K G558K G660K G663K C1059T G1406K G1488K G2036K G2381K G2604K G3004K C3037T G3259K C3501Y A3504W G3564K G3896K G4505K G4854K G5155K G5233R G5375K G5378K G5617K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K G7214K G7246K G7363K G8696K G8787K G8790K G8999K G9141K G9249K G10101K G10167K G10754K G10986K G11392K G11535K G12041K G12164K G13161K G13193K CG13239YK G13571K G14277K C14408T C14536Y G14548D G15199K G15202K G15769K G16068K G16188K G16787K G16988K G17096K G17848K C18138M G18297K G18318K G19086K G19252K G19480K G20128K G21123K G22018K G22899K G23162K C23291Y C23298Y G23302K G23343K A23403G C23766Y CG23855YK G24557K G24933K G25352K G25563T G25593S G26262K G27506K G28077K G28079K G28109K G28559K A29147R G29266K G29321K G29779K G29781K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451380 EPI_ISL_426814,2020-03-25,SARS-CoV-2/human/AUS/VIC553/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C1059T C3037T C14408T G17562T A23403G G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451381 EPI_ISL_426816,2020-03-25,SARS-CoV-2/human/AUS/VIC555/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C482Y ATG518- G558K G660K C1059T G2036K G2604K C3037T G3564K G4505K G7038K G8696K G8790K G9141K G9249K G11535K C11916T G12164K G14277K C14408T G15769K G17096K G18318K C19018T G22899K G23288K A23403G G24557K G24933K G25563T G28079K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451382 EPI_ISL_426817,2020-03-25,SARS-CoV-2/human/AUS/VIC556/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T C14805T T18237Y G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451383 EPI_ISL_426819,2020-03-25,SARS-CoV-2/human/AUS/VIC558/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G3564K C14408T C20148T A23403G G24933K G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451384 EPI_ISL_426820,2020-03-24,SARS-CoV-2/human/AUS/VIC559/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G377K G558K G660K G663K G840K C1059T G1406K G2036K G2235K G2247K G2604K G2769K G3004K C3037T C3480Y G3564B G4505D G5199B C5221Y G5233R G5294K G5375K C5784Y G5847K G6804K G7038K G7214K A8933M G9249K G10098K G10101K G10986K G11535K G12164K G12795K G13034K G13539K G14277K C14408T G14548R G15380K G15769K G16188K G16787K G17096K C18263Y G18297K G18318K G18445K G18551K G18643K G19086K G20126K G20128K G20627K G23162K G23288K A23403G G23576K G23775K G23856K G24104K G24124K C24422Y G24557K G24933K G25563T G25894K G26262K C27114Y G28077K G28079K G28134K C28332Y G28576R G28580K C28754Y G29030K G29157K G29266T G29706K G29764K A29792W CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451385 EPI_ISL_426821,2020-03-25,SARS-CoV-2/human/AUS/VIC560/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C11916T C14408T C18998T G22225T A23403G G23868T G25563T G29540A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451386 EPI_ISL_426822,2020-03-25,SARS-CoV-2/human/AUS/VIC561/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G558K G660K G2036K G2604K C3037T G3259K C3505Y C3551Y G3564K G4505K G5375K G6483K G7038K G7246K G7363K G8790K G9141K G9249K G10986K G11535K G12164K G13571K G14277K C14408T C14536Y G14548R G15202K G15769K G17096K G18318K G20128K C20762T C21575T G22018K TG22463YK G22899K G23288K A23403G C23766Y G24557K G24933K G26262K G28079K GGG28881AAC G29321K G29779K TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451387 EPI_ISL_426823,2020-03-24,SARS-CoV-2/human/AUS/VIC562/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1457Y C3037T G6410A A10323R C14408T C18877T A23403G C25339Y G25563T C28887Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451388 EPI_ISL_426824,2020-03-24,SARS-CoV-2/human/AUS/VIC563/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T7438C C14408T A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451389 EPI_ISL_426825,2020-03-25,SARS-CoV-2/human/AUS/VIC565/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C482Y G558K G660K G2604K G3004K G3564K G4505K C4540T G5375K G7038K G7246K G8688K C8782T G8790K G9141K G9249K T9477A G10986K G11535K G12164K G13571K G14548R C14805T G15199K G15769K G17096K A22351W G22899K G24557K G24933K G25979T G28079K T28144C C28253S C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451390 EPI_ISL_426826,2020-03-25,SARS-CoV-2/human/AUS/VIC566/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K C1059T C3037T C3551Y G3564K G4505K G7038K G8790K G9249K G12164K C14408T G15769K G22899K A23403G G24933K G25563T G28079K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451391 EPI_ISL_426831,2020-03-25,SARS-CoV-2/human/AUS/VIC571/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G660K T833C C1059T G2036K G2604K C3037T G3564K G5375K G6483K G7038K G7246K G8790K G9141K G9249K G10986K G11535K G12164K G13571K C14408T G14548R G17096K G17848K G22899K G23288K A23403G G24557K G24933K G25563T C27964T G28079K G29321K C29774T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451392 EPI_ISL_426832,2020-03-25,SARS-CoV-2/human/AUS/VIC572/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C482Y G558K G2036K A2480G C2558T G3564K G4505K G7038K C8078T G8790K C8917T G9249K G10631A C10889T G11083T G11535K G12164K G14277K C14805T G15769K G16795T G17096K G18318K G22018K G22899K G23505K G24557K G24933K G26144T G28079K G28180K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451393 EPI_ISL_426833,2020-03-26,SARS-CoV-2/human/AUS/VIC574/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G285K C313T C482Y G558K G660K G663K G2036K G2604K G3004K C3037T G3251K G3259K C3505Y G3564K G4505K G4854K G4908K G5155K G5233R G5375K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K G7214K G7246K G7363K G8696K G8790K G8999K C9110Y G9141K G9249K G10266K G10754K G10986K G11392K G11535K G12164K G13161K G13193K CG13239YK G13571K G14197K G14277K C14408T C14536Y G14548R G15075K G15199K G15202K G15769K G16188K G16741K G16787K G17096K GG17848KK C18261T C18263Y G18297K G18318K G19086K G19252K G20128K G21123K G22018K G22859K G22899K G23162K G23288K G23343K A23403G C23766Y C23855Y G24497K G24557K C24863T G24933K G25135T G25690T G26262K G27506K G28077K G28079K G28086T G28109K G28559K GGG28881AAC G29348K G29779K G29781K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451394 EPI_ISL_426835,2020-03-26,SARS-CoV-2/human/AUS/VIC576/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T G3564K C14408T G20002A A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451395 EPI_ISL_426836,2020-03-26,SARS-CoV-2/human/AUS/VIC578/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241Y G285K C482Y G558K G660K G663K G2036K G2604K G3004K C3037Y G3251K G3259K G3564K G4505K C5007Y G5375K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K G7214K G7246K G7363K G8696K G8790K C8917Y G9141K G9249K G10266K G10986K G11392K G11535K G12164K G13161K G13193K G13240K G13571K G14197K G14277K C14408Y C14536Y G14548R G15199K G15202K G15769K G16188K G16741K G16787K G17096K GG17848KK C17898Y G18056K G18297K G18318K G19086K G19252K G22018K G22859K G22899K G23162K G23343K A23403R C23766Y G24497K G24557K G24933K G27506K G28077K G28079K G28086K G28089K G28109K G28559K G29348K T29581W C29739Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451396 EPI_ISL_426837,2020-03-25,SARS-CoV-2/human/AUS/VIC580/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K C1059T C3037T G3564K G4505K G7038K C10851T G12164K C14408T G20931T C21297M T21314Y A23403G C23439T G24933K G25563T G29220R ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT451397 EPI_ISL_426838,2020-03-25,SARS-CoV-2/human/AUS/VIC581/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T G285K C482Y G558K G660K G663K G2036K G3004K C3037T G3564K G4505K C5039A G5375K G7038K G7246K G8790K G9141K G9249K C9996Y G10986K G11535K G12164K G13240K G13571K G14277K C14408T C14536Y G14548R G15202K G15760A G15769K C15960Y G16188K G17096K G17668K G18297K G18318K G19086K G19252K A20268G G22899K G23139K G23162K G23302K A23403G C23766Y G24557K G24933K G28077K G28079K G28559K C29095Y C29525Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451398 EPI_ISL_426839,2020-03-25,SARS-CoV-2/human/AUS/VIC582/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G558K C1059T G2036K G2447T G2914A C3037T G3564K G4505K G5924K G8790K G11535K C14408T G15708T C16260T G22899K A23403G G24933K G25563T C28821A TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451399 EPI_ISL_426840,2020-03-25,SARS-CoV-2/human/AUS/VIC583/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G558K G660K G663K C1420Y G2036K G2604K C3037T G3564K G4505K C5039A G5375K G5880K C6468Y G6483K G7038K G7214K G7246K G7363K G8790K G9141K G9249K G10986K G11535K G12164K G13240K G13571K G14277K C14408T C14536Y G14548R G15760A G15769K G17096K G17848K A20268G G22018K G22899K A23403G C23766Y G24557K G24933K G26262K G28079K G29135K G29260K G29263K T29293Y G29321K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451400 EPI_ISL_426841,2020-03-25,SARS-CoV-2/human/AUS/VIC584/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C482Y G558K G2036K C3551Y G3564K G4505K C4540T C8782T G8790K T9477A G11535K C14805T G15769K G22899K G23096R G24933K G25979T C27498Y T28144C C28311T C28657T C28863T C29167Y G29179K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451401 EPI_ISL_426842,2020-03-25,SARS-CoV-2/human/AUS/VIC585/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C482Y G558K G2036K G3564K G4505K C4540T C8782T G8790K T9477A G11535K C14805T G15769K G19006K G19009K G22899K G24933K G25979T T28144C C28253S C28311T C28657T C28863T C29198Y G29234K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451402 EPI_ISL_426843,2020-03-24,SARS-CoV-2/human/AUS/VIC586/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G558K G660K G2036K G2250K A2435R C2558T G3259K G4505K G4854K G5375K G5880K C6040T C6468Y G6483K G7038K G7246K G8550K G8696K G8790K G9249K G10098K G10986K G11535K G12164K A12334T G12795K G14277K C14536Y G14548R C14805T G15199K G15769K G16787K G17096K GG17848KK G18297K G18318K G19009K G19086K G20623K G22018K G22899K G24557K G24933K G26144T G28079K C28087G G28559K G28812K G28980K G29033K T29035Y G29321K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451403 EPI_ISL_426844,2020-03-25,SARS-CoV-2/human/AUS/VIC587/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C482Y G558K G2036K C3037T C3551Y G3564K G4505K G5924K G11535K C14408T G15769K C18877T G19006K A23403G G24933K G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451404 EPI_ISL_426846,2020-03-22,SARS-CoV-2/human/AUS/VIC589/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C482Y G558K G2036K C3037T G3564K G4505K C5223T G5253K G7038K G8790K G9249K G12164K C14408T G15769K G17096K G18318K A20268G A23403G G24557K G24933K G28079K A29316W G29781K TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451405 EPI_ISL_426847,2020-03-22,SARS-CoV-2/human/AUS/VIC590/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G660K G2036K G2604K C3037T C3551Y G3564K C5223T G5253K G5847K G7038K G8747K G8790K G9141K G9249K G10167K C10335Y G10986K G11535K G12164K G13571K G14277K C14408T G15769K G17096K G19480K A20268G C21370H A23403G C23766Y G24557K G24933K G25352K G28077K G28079K G28517K G28559K G29321K G29779K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451406 EPI_ISL_426848,2020-03-22,SARS-CoV-2/human/AUS/VIC591/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G285K G558K G660K G663K G1018K G1406K G1440A G1488K G2036K G2101K G2381K G2604K G2769K G2891A G3216K G3259K C3501Y A3504W G3564K G3896K G4505K G4854K G5155K G5196K C5221Y G5233R G5375K C5796Y C5826Y G5847K G5880K G6446K G6463T G6483K G6804K G7017K G7038K G7214K G7246K G8550K G8688K G8696K G8790K G9141K G9249K G10098K G10101K G10167K G10266K G10986K G11535K G12160K G12164K G13240K G13571K G14197K G14277K G14428K C14536Y G14548D G15230K G15769K G16068K G16188K G16508K G16663K G16787K G17096K GG17848KK C18138M G18170K G18297K G18318K G18445K G19009K G19086K G19446K G19480K G19679K G20128K G20627K G22018K G23288K G23505K G23576K C23766Y CG23855YK G24557K G24933K G25352K G25621K G26262K A27669G G28079K G28326K G28517K G28559K G28781K G29348K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451407 EPI_ISL_426849,2020-03-23,SARS-CoV-2/human/AUS/VIC592/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T G558K G660K G663K G2604K C2822Y C3037T G3564K G4505K C4596Y C5826Y G7038K G7246K G8925K G8999K G9141K G9249K G9999K G11048K G11535K G13540K C14408T G14548K G15769K G17096K T19580Y A23403G G23900K G24557K G24933K G25644T G28079K G28517K G28559K GGG28881AAC A29039W G29764K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451408 EPI_ISL_426850,2020-03-23,SARS-CoV-2/human/AUS/VIC593/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G558K G1440A G2891A G3564K G24933K C28868T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451409 EPI_ISL_426851,2020-03-25,SARS-CoV-2/human/AUS/VIC594/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C3037T C14408T C15371T A23403G GGG28881AAC C29120M G29220R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451410 EPI_ISL_426854,2020-03-25,SARS-CoV-2/human/AUS/VIC597/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C313T C3037T C14408T G21220K A23403G G28337T G28812S GGG28881AAC C29200Y TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451411 EPI_ISL_426855,2020-03-25,SARS-CoV-2/human/AUS/VIC598/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G3564K C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451412 EPI_ISL_426856,2020-03-25,SARS-CoV-2/human/AUS/VIC599/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451413 EPI_ISL_426859,2020-03-26,SARS-CoV-2/human/AUS/VIC604/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C379Y C990Y C1288Y C1594Y C2061Y C2223Y C2862Y C3037T C3501Y C3505Y C3817Y C4980Y C4990Y C5291Y C5615Y C6224Y C7063Y C7979Y C8299Y C9811Y C10408Y C10422Y C11022Y C11919Y C12459Y C13068Y C13643Y C13957Y C14408T C15509Y C15848Y C15857Y A16011G C16178Y C16792Y C17410Y C17430Y C17710Y C17738Y C19255Y C19259Y C19264Y C19273Y C19313Y C19317Y A19338R A19356W C19390Y C19572Y C19910Y C20081Y C20206Y C21133Y C21145Y C21855Y C21933Y C22000Y C22314Y C22560Y C22875Y C23154Y A23403G C23422Y C23481Y C23498Y C23785Y C23812Y C23895Y C24130Y C24134Y C24138Y C24319Y A24862G C25006Y C25339Y C25624Y C25626Y C25642Y C25688Y C25702Y C25854Y C26276Y C27167Y C28115Y C28310Y C28697Y C28728Y C28751Y C29013Y C29028Y C29034Y C29037Y C29318Y C29835Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451414 EPI_ISL_426860,2020-03-27,SARS-CoV-2/human/AUS/VIC605/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C4158T C10851T C14408T G20931T A23403G C23439T G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451415 EPI_ISL_426861,2020-03-27,SARS-CoV-2/human/AUS/VIC606/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C18877T C22445M A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451416 EPI_ISL_426862,2020-03-27,SARS-CoV-2/human/AUS/VIC607/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C4158T C10851T C14408T G20931T G21796S A23403G C23439T G25563T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451417 EPI_ISL_426863,2020-03-27,SARS-CoV-2/human/AUS/VIC609/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G441K A518W G558K G765K T876Y G1055K C1059T G2036K G2229K G2718K C3037T G3212K G3239K G3446K G3564K G4144K G4286K G4454K G5023K C5147Y G5378K G5617K G6358K G6527K G6530K G6804K T7345Y T7474Y G7805R T8209W G8936K T10153Y T10831Y AA11023MW A11041R G11535K G12164K G13508R C14408T G15769K G17848K C18037M G18266K A19614M C21370Y G21693K G22989K T23011Y C23058Y A23403G G24145K C24147Y A24182M C24381Y C24904Y G24933K G25010K G25013K G25203K G25305K G25352K G25354K G25563T C25600Y C25821Y G25939K G25955K G26266K CT27411YY T28470Y G28559K G28690R C29007S C29347Y G29736T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451418 EPI_ISL_426864,2020-03-26,SARS-CoV-2/human/AUS/VIC610/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T C15407Y A23403G A26864R C29353T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451419 EPI_ISL_426865,2020-03-27,SARS-CoV-2/human/AUS/VIC611/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G11083K C14408T A23403G G25563T G25593S AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451420 EPI_ISL_426866,2020-03-26,SARS-CoV-2/human/AUS/VIC612/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T G25593C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451421 EPI_ISL_426867,2020-03-26,SARS-CoV-2/human/AUS/VIC613/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C2555Y C3037T G12261A C14408T C19170T G19509A G21394K G22424K A23403G G24933K C25006Y C28716S GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451422 EPI_ISL_426869,2020-03-26,SARS-CoV-2/human/AUS/VIC614/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- G8925S T14458K C16468T C17747Y A17858G C18060T T21802C A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451423 EPI_ISL_426870,2020-03-28,SARS-CoV-2/human/AUS/VIC615/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A -11075TTT G11083T C27964T T28688C G29742T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451424 EPI_ISL_426871,2020-03-26,SARS-CoV-2/human/AUS/VIC616/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2507T C3037T C3373A A3870R T6237Y G7019K T7992K G8084R T9813K A10788M T11522K T11612Y C14408T C14790Y T15207Y C17167Y A18135W A23403G C24213Y C25626Y GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451425 EPI_ISL_426872,2020-03-26,SARS-CoV-2/human/AUS/VIC617/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T T22447Y A23403G G25563T G25593C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451426 EPI_ISL_426923,2020-03-28,SARS-CoV-2/human/AUS/VIC619/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451427 EPI_ISL_426924,2020-03-28,SARS-CoV-2/human/AUS/VIC620/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G19549R A20268G A23403G TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451428 EPI_ISL_426925,2020-03-28,SARS-CoV-2/human/AUS/VIC621/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451429 EPI_ISL_426926,2020-03-29,SARS-CoV-2/human/AUS/VIC622/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451430 EPI_ISL_426927,2020-03-28,SARS-CoV-2/human/AUS/VIC623/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C19118T C26088T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451431 EPI_ISL_426928,2020-03-28,SARS-CoV-2/human/AUS/VIC624/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C203Y C241T C1059T C3037T T5773W A8635R G8706K C8782Y C14408T T18228Y C21648T C21677Y C21933Y A23403G C23673T C23718Y G25563T G25877K T26099W G26754K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451432 EPI_ISL_426929,2020-03-28,SARS-CoV-2/human/AUS/VIC625/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C9180T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451433 EPI_ISL_426931,2020-03-29,SARS-CoV-2/human/AUS/VIC627/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C1076T G1397A -11075TTT G11083T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451434 EPI_ISL_426932,2020-03-29,SARS-CoV-2/human/AUS/VIC628/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T G22427K A23403G T24152C C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451435 EPI_ISL_426873,2020-03-25,SARS-CoV-2/human/AUS/VIC629/2020,Australia / Victoria ATTAAAGGTTTATACC1- C1076T G1397A G11083T C27964T T28688C G29742T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451436 EPI_ISL_426874,2020-03-26,SARS-CoV-2/human/AUS/VIC630/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G285K C482Y G558K G660K G663K G945K G1018K C1076T G1397A G1406K G1488K G2036K G2604K G3004K G3259K C3551Y G3564K G4505K G4854K G5233R G5375K G5617K G5847K G5880K C6468Y G6483K G6804K G7017K G7038K C7194Y G7214K G7246K G7363K G8688K G8696K G8790K G8999K G9141K G9249K G10167K G10754K G10986K G11083T G11392K G11535K G12160K G12164K G13161K G13193K CG13239YK G13571K G14277K C14536Y G14548D G15199K G15202K G15769K G16068K G16188K G16741K G16787K G16988K G17096K G17668K GG17848KK C18138M G18297K G18318K G19086K G19252K G19480K G20128K G20627K G21123K G22018K G22899K G23162K G23288K C23291Y G23343K G23505K C23766Y C23855Y G24497K G24557K G24933K G25621K G26262K G27506K C27964T G28077K G28079K G28086K G28559K T28688C C29087Y G29348K G29742T G29779K G29781K GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451437 EPI_ISL_426875,2020-03-27,SARS-CoV-2/human/AUS/VIC633/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A14747G A20755C A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451438 EPI_ISL_426876,2020-03-28,SARS-CoV-2/human/AUS/VIC635/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451439 EPI_ISL_426877,2020-03-28,SARS-CoV-2/human/AUS/VIC636/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747Y A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451440 EPI_ISL_426933,2020-03-28,SARS-CoV-2/human/AUS/VIC637/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6723T C14408T A23403G T26094C C29555T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451441 EPI_ISL_426934,2020-03-29,SARS-CoV-2/human/AUS/VIC638/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451442 EPI_ISL_426935,2020-03-29,SARS-CoV-2/human/AUS/VIC639/2020,Australia / Victoria A1- C241T C3037T C4331Y A9707G C14408T C18877T A22404R A23403G C25511Y G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451443 EPI_ISL_426937,2020-03-29,SARS-CoV-2/human/AUS/VIC641/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C635Y C1059T C3037T C14408T C18176Y G20176S A21845M A23403G G25563T G29711T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451444 EPI_ISL_426938,2020-03-29,SARS-CoV-2/human/AUS/VIC642/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACA1- G680A C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451445 EPI_ISL_426939,2020-03-28,SARS-CoV-2/human/AUS/VIC643/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTTTCAACGAGAAAACACACGTCCAACTCAGTTTGCCTGTTTTACA1- C1059T C3037T C3130T A7512R C7518M T7623K A7626R C7843T G13383S C14408T T22939C A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451446 EPI_ISL_426940,2020-03-28,SARS-CoV-2/human/AUS/VIC644/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C1392T C3037T G3251T C10138Y C14408T G22093T A23403G G25563T C26625T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451447 EPI_ISL_426941,2020-03-28,SARS-CoV-2/human/AUS/VIC645/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G11083T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451448 EPI_ISL_426942,2020-03-24,SARS-CoV-2/human/AUS/VIC646/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A C3177T C6285T C8782T C15960T T18736C G19684T C24034T C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451449 EPI_ISL_426943,2020-03-28,SARS-CoV-2/human/AUS/VIC647/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T C8140Y C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451450 EPI_ISL_426945,2020-03-28,SARS-CoV-2/human/AUS/VIC649/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C4540T G6513K G7544K T9477A G13723K C14805T C23435Y G24095K G25033R C25267Y A25385W G25979T T26300Y T28144C C28311T C28556Y C28657T C28863T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451451 EPI_ISL_426947,2020-03-28,SARS-CoV-2/human/AUS/VIC651/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T C15857T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451452 EPI_ISL_426948,2020-03-28,SARS-CoV-2/human/AUS/VIC652/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451453 EPI_ISL_426949,2020-03-28,SARS-CoV-2/human/AUS/VIC653/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C3037T C14408T T19839C A23403G C24213Y GGG28881AAC G29654A GGAGTACGATCGAG29744- ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451454 EPI_ISL_426950,2020-03-28,SARS-CoV-2/human/AUS/VIC654/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A8413R G12661K C14408T C16111T C16323Y A23403G GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451455 EPI_ISL_426951,2020-03-28,SARS-CoV-2/human/AUS/VIC655/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T A2018G C3037T C5622T C14408T T21995C A23403G C23422Y G25563T G29175R TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451456 EPI_ISL_426952,2020-03-28,SARS-CoV-2/human/AUS/VIC656/2020,Australia / Victoria ATTAAAGGTTTA1- C4540T C8782T A9175M T9477A C14805T G17632R A25393R G25979T C26340Y C26934M T28144C C28311T C28657T C28863T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451457 EPI_ISL_426953,2020-03-28,SARS-CoV-2/human/AUS/VIC657/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C18877T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451458 EPI_ISL_426954,2020-03-28,SARS-CoV-2/human/AUS/VIC658/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C203Y C241T C3037T C14408T A18008R A23403G G26951K GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451459 EPI_ISL_426955,2020-03-27,SARS-CoV-2/human/AUS/VIC659/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G1440A G2891A A6944G C9430T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451460 EPI_ISL_426956,2020-03-28,SARS-CoV-2/human/AUS/VIC660/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C300T C6312A G11083T C13730T C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451461 EPI_ISL_426957,2020-03-27,SARS-CoV-2/human/AUS/VIC661/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G5305K G11083T C14805T T17247C A23085R G26144T G29175K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451462 EPI_ISL_426958,2020-03-27,SARS-CoV-2/human/AUS/VIC662/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6695A C8782T C17747T A17858G C18060T G23126T A24694T T28144C G29000T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451463 EPI_ISL_426960,2020-03-27,SARS-CoV-2/human/AUS/VIC664/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6573T C14408T A23403G C25528T GGG28881AAC G29294K GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451464 EPI_ISL_426961,2020-03-27,SARS-CoV-2/human/AUS/VIC665/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T G558K C1059T C3037T G3259K G3564K G3896K G6513K G7214K G8790K G10986K G11605K G11954K G12164K G12578K G13571K G14277K C14408T G16508K G17096K G19679K G20578K G20922K A22524R A23403G G24933K G25563T G26526K C27812T G28079K G29543K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451465 EPI_ISL_426962,2020-03-27,SARS-CoV-2/human/AUS/VIC666/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A20268G T21715Y A23403G C28854T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451466 EPI_ISL_426963,2020-03-27,SARS-CoV-2/human/AUS/VIC667/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- G1440A G2891A C4668T G29260A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451467 EPI_ISL_426964,2020-03-27,SARS-CoV-2/human/AUS/VIC668/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- T10600C G11083T C14805T T17247C G22708T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451468 EPI_ISL_426965,2020-03-27,SARS-CoV-2/human/AUS/VIC669/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T490A C3177T G4080K C6285T C8782T A8810R C15960T T18736C G19553K G19684T C24034T C27635T G28077C T28144C A29700G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451469 EPI_ISL_426966,2020-03-27,SARS-CoV-2/human/AUS/VIC670/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6723T C14408T A23403G T26094C C27425Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451470 EPI_ISL_426968,2020-03-27,SARS-CoV-2/human/AUS/VIC672/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C5544T C11941T C14408T A23403G G27281T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451471 EPI_ISL_426969,2020-03-26,SARS-CoV-2/human/AUS/VIC673/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G3030K C3037T G10310A T16835Y G17225K G19037K A23403G G25346K C25350T G26529S C27584Y T27824Y C29835Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451472 EPI_ISL_426970,2020-03-27,SARS-CoV-2/human/AUS/VIC674/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451473 EPI_ISL_426971,2020-03-27,SARS-CoV-2/human/AUS/VIC676/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451474 EPI_ISL_426972,2020-03-27,SARS-CoV-2/human/AUS/VIC677/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C22677M A23403G G25563T G25593S C29296Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451475 EPI_ISL_426973,2020-03-27,SARS-CoV-2/human/AUS/VIC678/2020,Australia / Victoria ATTAAAGG1- C6312A G11083T C13730T A20232R C22987Y C23130M C23929T C28311T G29156K C29303M CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451476 EPI_ISL_426975,2020-03-27,SARS-CoV-2/human/AUS/VIC680/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C1076T G1397A -11075TT G11084T T28688C A28955T G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451477 EPI_ISL_426976,2020-03-27,SARS-CoV-2/human/AUS/VIC681/2020,Australia / Victoria ATTAAAGGTTTA1- C1076T G1397A A6342R -11075TT G11084T T28688C A28955T CA29187YR G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451478 EPI_ISL_426977,2020-03-29,SARS-CoV-2/human/AUS/VIC682/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451479 EPI_ISL_426978,2020-03-29,SARS-CoV-2/human/AUS/VIC683/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G11086T T28688C A28955T G29742T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451480 EPI_ISL_426979,2020-03-29,SARS-CoV-2/human/AUS/VIC684/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T G319A C593Y C1059T C3037T G4080S C4626Y C5183Y T10898K G11375A C12664T C14408T C19017T C21114T A23403G C24213Y C25521Y G25563T T25832Y CC27643YY C27769Y C29754Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451481 EPI_ISL_426980,2020-03-28,SARS-CoV-2/human/AUS/VIC685/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- A2480G C2558T C8078T C8917T G10631A C10889T G11083T C14805T G16795T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451482 EPI_ISL_426981,2020-03-29,SARS-CoV-2/human/AUS/VIC687/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451483 EPI_ISL_426982,2020-03-29,SARS-CoV-2/human/AUS/VIC689/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C9438T C14408T C15324T T17970W A23403G A26566R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451484 EPI_ISL_426985,2020-03-27,SARS-CoV-2/human/AUS/VIC693/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G1228R G2921R C3037T C4002T G10097A C10747Y C13536T C14408T A23403G C23731T T24886W GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451485 EPI_ISL_426986,2020-03-28,SARS-CoV-2/human/AUS/VIC694/2020,Australia / Victoria AT1- C241T C3037T C5039A C5849T C14408T G15760A A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451486 EPI_ISL_426987,2020-03-28,SARS-CoV-2/human/AUS/VIC695/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T A2923R C3037T A6728R C12420Y C14408T A23403G C23854T C25262Y G25563T G25593C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451487 EPI_ISL_426988,2020-03-28,SARS-CoV-2/human/AUS/VIC696/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1392Y C3037T C14408T A23403G C25658T C28000Y GGG28881AAC TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451488 EPI_ISL_426989,2020-03-28,SARS-CoV-2/human/AUS/VIC697/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A2480G C2558T C8078T C8917T G10631A C10889T G11083T C14805T G16795T A22401R G26144T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451489 EPI_ISL_426990,2020-03-27,SARS-CoV-2/human/AUS/VIC700/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6723T C14408T A23403G T26094C G28827K TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451490 EPI_ISL_426878,2020-03-21,SARS-CoV-2/human/AUS/VIC701/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C6781T C8782T C17747T A17858G C18060T G19072T G19542T G23593T A24694T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451491 EPI_ISL_426992,2020-03-30,SARS-CoV-2/human/AUS/VIC705/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C815Y C1514T G1922R C3037T C4475Y C4586Y A6584R C8626Y C8673Y C10647Y G12442R C14408T G15118K G16075K A19823W A21345W A23403G T24084Y G26143K C27046T T28575Y GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451492 EPI_ISL_426993,2020-03-30,SARS-CoV-2/human/AUS/VIC706/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T A4518G C14408T A23403G C25350T C25731Y C29034Y C29200M AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451493 EPI_ISL_426994,2020-03-29,SARS-CoV-2/human/AUS/VIC707/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C14408T A23403G G25563T G25593C G27214T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451494 EPI_ISL_426995,2020-03-29,SARS-CoV-2/human/AUS/VIC708/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G G24821K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451495 EPI_ISL_426998,2020-03-29,SARS-CoV-2/human/AUS/VIC711/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- T490A C3177T C10790Y A12820R C15960T T18736C C19164M G19684T T22228Y C24034T G27602K C27635T G28077C T28144C A29700G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451496 EPI_ISL_426999,2020-03-29,SARS-CoV-2/human/AUS/VIC712/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451497 EPI_ISL_427000,2020-03-29,SARS-CoV-2/human/AUS/VIC713/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451498 EPI_ISL_427001,2020-03-27,SARS-CoV-2/human/AUS/VIC716/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T1368C C2094Y C6195Y C6990T C14805T C20736T C23707T C23996T G25598T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451499 EPI_ISL_427002,2020-03-27,SARS-CoV-2/human/AUS/VIC718/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T T7438C C12528T C14408T A23403G C29353T C29666Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451500 EPI_ISL_427003,2020-03-28,SARS-CoV-2/human/AUS/VIC720/2020,Australia / Victoria ATTAAAGGTTTATACCTTC1- C241T C1514T C3037T C14408T A23403G C27046T G28817K GGG28881AAC C29284M AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451501 EPI_ISL_427004,2020-03-27,SARS-CoV-2/human/AUS/VIC721/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G957A A1547G A4287R G4807K G9242K T9475Y C10433Y G11055K G15285K G17254K A17858R C18060T T21632Y G26634S T28144C TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451502 EPI_ISL_427005,2020-03-29,SARS-CoV-2/human/AUS/VIC722/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1926M C3037T A5969M C8964Y G9123K G9245K T10387K G10793R T12628W G17383R G17533R T19350W A20214R G22809R A23403G C25642Y G27358T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451503 EPI_ISL_427007,2020-03-29,SARS-CoV-2/human/AUS/VIC727/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- G1440A C2062Y G2891A C4421Y A6944G C7968Y C9430T C10422Y C13517Y C15857Y G19582K C21145Y C21742T C22295Y C22949Y C26313T C28751Y C29037Y T29251K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451504 EPI_ISL_427008,2020-03-29,SARS-CoV-2/human/AUS/VIC729/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C3501Y C6843Y T7438C C10422Y C14408T C15857Y C18526Y C19264Y C19273Y C19318Y C19502Y C19545Y C21145Y T21408Y C21587Y C21621Y C22000Y C22560Y C22875Y A23403G C25006Y C25836Y C26542Y C27494Y C28728Y C28896Y C28905Y C28977Y C29034Y C29037Y C29318Y C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451505 EPI_ISL_427009,2020-03-30,SARS-CoV-2/human/AUS/VIC730/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G1696K C3037T C6573T G6755K T6890W G8204R A9236R C10775Y C14408T A23403G C25528T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451506 EPI_ISL_427010,2020-03-30,SARS-CoV-2/human/AUS/VIC731/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C313T C3037T C14408T T20064C A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451507 EPI_ISL_427011,2020-03-30,SARS-CoV-2/human/AUS/VIC732/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C3176Y A13943R C14408T G21423K A22013R A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451508 EPI_ISL_427012,2020-03-30,SARS-CoV-2/human/AUS/VIC733/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T C24904Y A28018W T28144C C29149Y G29422R TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451509 EPI_ISL_427013,2020-03-30,SARS-CoV-2/human/AUS/VIC734/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451510 EPI_ISL_427014,2020-03-30,SARS-CoV-2/human/AUS/VIC735/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451511 EPI_ISL_427015,2020-03-30,SARS-CoV-2/human/AUS/VIC736/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C635Y C2644Y C8782T C17747Y A17858G C18060T C20429Y A24694T C26212Y T28144C C28253Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451512 EPI_ISL_427016,2020-03-30,SARS-CoV-2/human/AUS/VIC737/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451513 EPI_ISL_427017,2020-03-30,SARS-CoV-2/human/AUS/VIC738/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451514 EPI_ISL_427018,2020-03-30,SARS-CoV-2/human/AUS/VIC739/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1514T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451515 EPI_ISL_427019,2020-03-30,SARS-CoV-2/human/AUS/VIC741/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T C17747T A17858G C18060T A24694T C24904Y T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451516 EPI_ISL_427020,2020-03-29,SARS-CoV-2/human/AUS/VIC742/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T GTTATG515- C3037T C10456T C14408T A23403G GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451517 EPI_ISL_427022,2020-03-29,SARS-CoV-2/human/AUS/VIC744/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6573T C14408T A23403G C25528T GGG28881AAC T29264K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451518 EPI_ISL_427023,2020-03-29,SARS-CoV-2/human/AUS/VIC745/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C6573T C14408T A23403G C25528T GGG28881AAC TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451519 EPI_ISL_427024,2020-03-29,SARS-CoV-2/human/AUS/VIC746/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- T490A G2398R C3177T C6285T C8782T C15960T T18736C G19684T C24034T C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451520 EPI_ISL_427025,2020-03-31,SARS-CoV-2/human/AUS/VIC747/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G6352T C10956T C27688T C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451521 EPI_ISL_427026,2020-03-30,SARS-CoV-2/human/AUS/VIC748/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C3817Y G10265A C10422Y C14408T C19264Y T19623Y C21145Y C22323Y C22875Y A23403G C23481Y C25006Y C25626Y C26873Y C27509Y GGG28881AAC C29034Y C29037Y C29057Y C29095Y C29318Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451522 EPI_ISL_427028,2020-03-30,SARS-CoV-2/human/AUS/VIC751/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- -11075TTT G11083T G13627T C14805T C15540T G26144T A28338G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451523 EPI_ISL_427029,2020-03-30,SARS-CoV-2/human/AUS/VIC752/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C228T G1397A G9479T A9514G G26720C T28688C T28835C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451524 EPI_ISL_427030,2020-03-30,SARS-CoV-2/human/AUS/VIC753/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C3096T G11083T G13627T C14805T C15540T G26144T C27513T T27984C A28338G GAGTGTACAGTGAACAAT29755- AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451525 EPI_ISL_427031,2020-03-30,SARS-CoV-2/human/AUS/VIC754/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G G27877C GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451526 EPI_ISL_427032,2020-03-30,SARS-CoV-2/human/AUS/VIC755/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C2523T C3037T G5532K G7410R G11851S G12331R A12928R C14408T C14491Y C15848Y C15944Y A19031R C19604Y C20938Y T22573Y A22759W C23226Y A23403G G24755K G25563T G26951K A27489R TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451527 EPI_ISL_427034,2020-03-31,SARS-CoV-2/human/AUS/VIC757/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C2416T C3037T C3817Y C6432Y C8389Y C8717Y C11650Y T12112C C13629Y C14408T C15857Y A16942G C17738Y C21145Y G21974C C22000Y C22875Y A23403G G25563T C25692Y G26233T C27509Y C29073Y C29211Y C29274Y C29281Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451528 EPI_ISL_427036,2020-03-29,SARS-CoV-2/human/AUS/VIC760/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C6582Y C14184Y C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451529 EPI_ISL_427038,2020-03-29,SARS-CoV-2/human/AUS/VIC762/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C18877T A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451530 EPI_ISL_427039,2020-03-30,SARS-CoV-2/human/AUS/VIC763/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C203Y C635Y C683Y C3096Y C4058Y C5000A C9430Y T9477A C10156Y C13821Y C14805T A18114R G19962R C24213Y G25979T C26228Y G26526R C27735Y T28144C C28253Y C28657T C28863T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451531 EPI_ISL_427040,2020-03-29,SARS-CoV-2/human/AUS/VIC764/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451532 EPI_ISL_427041,2020-03-29,SARS-CoV-2/human/AUS/VIC765/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1091Y C3037T C7528Y T12010W C14408T C18877T A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451533 EPI_ISL_427042,2020-03-18,SARS-CoV-2/human/AUS/VIC766/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1440A C1943T G2891A C7011T A19365M C21377S G22141A T23030C C25046T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451534 EPI_ISL_427044,2020-03-20,SARS-CoV-2/human/AUS/VIC767/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1655K G5922K C6312A C8626Y C13730T C23929T C27481Y A27510W C28311T G28797S AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451535 EPI_ISL_427045,2020-03-20,SARS-CoV-2/human/AUS/VIC768/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451536 EPI_ISL_427046,2020-03-20,SARS-CoV-2/human/AUS/VIC769/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451537 EPI_ISL_450214,2020-03-18,SARS-CoV-2/human/AUS/VIC770/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451538 EPI_ISL_427047,2020-03-18,SARS-CoV-2/human/AUS/VIC771/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C106Y G1397A C2358S A3751W A3819R G4415R T4535Y G5735S C7564Y G10447R G12930K G13183K G13379K A13566R C13775Y C15298Y C16551Y C17288Y G17947K G24611R G24635K G24914K T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451539 EPI_ISL_427048,2020-03-20,SARS-CoV-2/human/AUS/VIC772/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A G11083T C13730T C23929T C28311T G29049R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451540 EPI_ISL_427049,2020-03-20,SARS-CoV-2/human/AUS/VIC773/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C6312A G11083T C13730T C23929T C28311T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451541 EPI_ISL_427050,2020-03-18,SARS-CoV-2/human/AUS/VIC774/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G A29015W C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451542 EPI_ISL_427051,2020-03-30,SARS-CoV-2/human/AUS/VIC776/2020,Australia / Victoria ATTAAAGGTTTA1- G185K C241T G837K G1458S G1478S C1878M C3037T G3047K G3085K T3877Y G4006K T5674Y G6323R G7463S G7561K G8171S G8185K G8372K T8482Y G10310A T10595Y G11179K G12274K G13816K C14408T G14428K G16591K G16741S G17278K GG18020KR G19891K G20477K G22244S G22257S G23349K A23403G G23661K G24872K G24953K G25013K G25334S C25350T G25409K G25471K C25511Y G28179K G29427K AGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29687- >MT451543 EPI_ISL_427053,2020-03-31,SARS-CoV-2/human/AUS/VIC778/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- G626T G3231K C3619Y C4829Y A5772W T8919Y G11083T C14805T T17247C A25122M G26144T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451544 EPI_ISL_427055,2020-03-30,SARS-CoV-2/human/AUS/VIC780/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G8102T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451545 EPI_ISL_427056,2020-03-30,SARS-CoV-2/human/AUS/VIC781/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C A23403G A26864G C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451546 EPI_ISL_427057,2020-03-30,SARS-CoV-2/human/AUS/VIC782/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451547 EPI_ISL_427058,2020-03-30,SARS-CoV-2/human/AUS/VIC783/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451548 EPI_ISL_427059,2020-03-30,SARS-CoV-2/human/AUS/VIC784/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6040T C6695A C8782T C17747T A17858G C18060T A21137R C23202Y A24694T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451549 EPI_ISL_427060,2020-03-30,SARS-CoV-2/human/AUS/VIC785/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A21944T A23403G C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451550 EPI_ISL_427061,2020-03-30,SARS-CoV-2/human/AUS/VIC786/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G680A C3037T C14408T C17172T A23403G C24213Y A29763T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451551 EPI_ISL_427062,2020-03-30,SARS-CoV-2/human/AUS/VIC787/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T T15166C C20762T A23403G A26864G C29353T C29523T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451552 EPI_ISL_427063,2020-03-31,SARS-CoV-2/human/AUS/VIC788/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T1339Y A2480G C2558T G9923A G11083T C14805T T25210C G26144T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451553 EPI_ISL_427064,2020-03-31,SARS-CoV-2/human/AUS/VIC789/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1594T C3037T C6388T G7936T C11109T C13335T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451554 EPI_ISL_427065,2020-03-31,SARS-CoV-2/human/AUS/VIC790/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C1594T C3037T T5915Y C6388Y G7936K C11109T C13335Y C14408T T19755Y A23403G G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451555 EPI_ISL_427066,2020-03-31,SARS-CoV-2/human/AUS/VIC791/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451556 EPI_ISL_427067,2020-03-31,SARS-CoV-2/human/AUS/VIC792/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C4540T G5008K C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451557 EPI_ISL_427068,2020-03-31,SARS-CoV-2/human/AUS/VIC793/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C635Y A2647M C3037T T7438C C14408T T15166C C15720T C19495H A19535R A23403G G24794K A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451558 EPI_ISL_427069,2020-03-31,SARS-CoV-2/human/AUS/VIC794/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T T15166C A23403G A26864G G29220R C29353T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451559 EPI_ISL_427070,2020-03-31,SARS-CoV-2/human/AUS/VIC796/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T C17119M A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451560 EPI_ISL_427071,2020-04-01,SARS-CoV-2/human/AUS/VIC797/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451561 EPI_ISL_427072,2020-04-01,SARS-CoV-2/human/AUS/VIC798/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C11962Y G13966R C14408T T15021C A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451562 EPI_ISL_427073,2020-04-01,SARS-CoV-2/human/AUS/VIC799/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A7990W C14408T C21648T A23403G C23673T G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451563 EPI_ISL_427074,2020-04-01,SARS-CoV-2/human/AUS/VIC800/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C G20995K A23403G A26864G G29332K C29353T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451564 EPI_ISL_427076,2020-04-01,SARS-CoV-2/human/AUS/VIC802/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T T15166C A23403G C26822Y A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451565 EPI_ISL_427077,2020-04-01,SARS-CoV-2/human/AUS/VIC803/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1473Y C3037T T7438C C14408T T15166C A23403G A26864G C29353T C29754Y TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451566 EPI_ISL_427078,2020-04-01,SARS-CoV-2/human/AUS/VIC804/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C241T C3037T T7438C C14408T A23403G A26864G G29033R C29353T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451567 EPI_ISL_427079,2020-03-16,SARS-CoV-2/human/AUS/VIC805/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T GT5743SY GG5765RS C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451568 EPI_ISL_427080,2020-03-23,SARS-CoV-2/human/AUS/VIC806/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C4002T G10097A C13536T C14184T C14408T C21058T A23403G C23731T T23781Y G28086T GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451569 EPI_ISL_427081,2020-03-24,SARS-CoV-2/human/AUS/VIC807/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T G4510T C7765T C14408T G20578T A22492R A23403G G25563T G27670T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451570 EPI_ISL_427082,2020-03-28,SARS-CoV-2/human/AUS/VIC808/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C3096T A8651M G8653K G11083T C12546Y C12781T G13627T C14805T C15540T C16375Y G17944T G22493K G26144T A28338G A29191W CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451571 EPI_ISL_427083,2020-03-28,SARS-CoV-2/human/AUS/VIC809/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T6814W T11638C G13379S C14408T A23403G GGG28881AAC C29708T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451572 EPI_ISL_427084,2020-04-01,SARS-CoV-2/human/AUS/VIC810/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T1578Y A3801R G6323R C6695A A8913W A13635W C17747Y A17858G C18060T A19267R G19342K T19354W T22175W G22569S C22950Y G23067R A23145R T23817Y A24694T T25627Y T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451573 EPI_ISL_427087,2020-04-02,SARS-CoV-2/human/AUS/VIC814/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C835Y C3037T A4308R T4922Y C5512T C10969Y G13379S C14408T C15185Y G21724T A23403G T27687C GGG28881AAC A29191W AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451574 EPI_ISL_427088,2020-04-02,SARS-CoV-2/human/AUS/VIC815/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T153Y C241T G2036S C2416T C3037T T3331Y G4510T C5900Y T7141Y T7263Y G7650K C7765T C9131Y C10741Y G11502K G12338S C12621Y G13346K G13379S T13890Y G13975K T14075Y C14408T C15017Y C15419Y G15705K C16362Y G16707K C19955Y A20150R G20578T G21100K A22003R A23403G G24547K C25469Y G25563T T25953Y C26044Y A26859R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451575 EPI_ISL_427089,2020-04-03,SARS-CoV-2/human/AUS/VIC816/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T T15021C T15144C C19151T A20935G A23403G TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451576 EPI_ISL_427090,2020-04-03,SARS-CoV-2/human/AUS/VIC818/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- G174C C1594T C3037Y C3177Y C3874Y C6285Y C8290Y C8782Y C11109T C13443Y G13538R C14408T C15960Y C17747Y A17858R C17874Y C18788T G19684K GTAGAAATT20210- C22523M T22896Y G25563K G28077S C28253Y A29700R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451577 EPI_ISL_427091,2020-04-03,SARS-CoV-2/human/AUS/VIC819/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C751Y A895R C2716Y G3720K G4505K G5199K G5564K A7024W G7070K AA11023MW TGAC11028KRMY TCAC11033YMMY TAG11040WRK T11046W G11083T G11321R G12647K G12685T A12949W G13126K A13135W G13379S C13730T A13869R C14645Y C15656T G16245R C16255Y C16289Y C17639Y A18001R C18338S C19524T G20578D C21005S G23161R C23929T C24904Y G24933K C25046Y C25469Y G25767K C28311T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451578 EPI_ISL_427092,2020-04-03,SARS-CoV-2/human/AUS/VIC820/2020,Australia / Victoria ATTA1- C241T C1059T C3037T C10851T C14183T C14408T A23403G G25563T C29732T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451579 EPI_ISL_427093,2020-04-03,SARS-CoV-2/human/AUS/VIC821/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T A2829W C3037T C3130Y C3747Y G4112K C4449S C5365Y C6114Y C6242Y T6301Y A7193W T8359Y C11594Y G13379S T13800W C14408T C15019Y G16280S T16527K G16660K C17036Y G18025K T18631Y C18754Y T18834Y G19394S T20642K C22987Y A23403G G24743K T25043Y C26423Y C26456Y G26501K C28556Y C28634Y G28839K G28922K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451580 EPI_ISL_427094,2020-04-03,SARS-CoV-2/human/AUS/VIC823/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C10851T C14183T C14408T C22480Y A23403G G25563T C29732T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451581 EPI_ISL_427095,2020-04-03,SARS-CoV-2/human/AUS/VIC824/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C635Y C1059T C3037T C3096Y A8651M C10851T C14183T C14408T A23403G G25563T G29041S C29304Y TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451582 EPI_ISL_427096,2020-04-03,SARS-CoV-2/human/AUS/VIC828/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C10755T C12854T C14408T C19813T A23403G C25587T GGG28881AAC G29745T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451583 EPI_ISL_427097,2020-04-04,SARS-CoV-2/human/AUS/VIC829/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7534Y C14408T G20756T A23403G T29327Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451584 EPI_ISL_427100,2020-04-04,SARS-CoV-2/human/AUS/VIC836/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C6285T C8782T C15960T T18736C G19684T G22364K G22487D C24034T C27635T G28077C T28144C A29700G TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451585 EPI_ISL_427101,2020-04-04,SARS-CoV-2/human/AUS/VIC837/2020,Australia / Victoria ATTAAAGGTTT1- C241T C1594T C3037T C3874Y C8290T C11109T C14408T C18788T C22523M A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451586 EPI_ISL_427102,2020-04-04,SARS-CoV-2/human/AUS/VIC842/2020,Australia / Victoria ATTAAAGGTTTATAC1- C241T C1059T C3037T G8185A C14408T T17380C T21931C G22430K A22438W G22442K C22522M A23403G C23785T G25563T T29214Y TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451587 EPI_ISL_427103,2020-04-04,SARS-CoV-2/human/AUS/VIC843/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451588 EPI_ISL_427104,2020-04-04,SARS-CoV-2/human/AUS/VIC844/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G368T C547T C3037T G9805T C14408T T23164W A23403G C27610M CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451589 EPI_ISL_427105,2020-04-04,SARS-CoV-2/human/AUS/VIC845/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1594T C3037T C3768Y C8290T C11109T C14408T C18788T C22523M A23403G G25563T G29399K CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451590 EPI_ISL_427106,2020-04-04,SARS-CoV-2/human/AUS/VIC846/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C884T G1397A C3040T G8653T -11075TT G11084T C14932T G27366K C27999T T28688C G29742T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451591 EPI_ISL_427107,2020-04-04,SARS-CoV-2/human/AUS/VIC847/2020,Australia / Victoria A1- C8782T C17747T A17858G C18060T A24694T T28144C CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451592 EPI_ISL_427108,2020-04-04,SARS-CoV-2/human/AUS/VIC848/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G23593K G25563T G27916T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451593 EPI_ISL_427109,2020-04-04,SARS-CoV-2/human/AUS/VIC849/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C683Y C1059T C3037T A8651M C11824Y C14408T A23403G G25563T C28253Y TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451594 EPI_ISL_427110,2020-04-04,SARS-CoV-2/human/AUS/VIC850/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T G13392K C14408T A22012R A23403G C25916Y GGG28881AAC TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451595 EPI_ISL_427111,2020-04-04,SARS-CoV-2/human/AUS/VIC851/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T T1116Y C2700Y C3037T C4921Y T5959Y A5971R C5996Y T6334W A6709R C7735Y C9198Y T9629Y C10765Y G13379S T13462Y C14408T C16792Y A17943R A20092M C21622Y C22523M C22551Y A23403G C23435Y C24096Y G24200R C24351S C24831Y A25596R C27641Y T28773Y GGG28881AAC C29259T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451596 EPI_ISL_427112,2020-04-04,SARS-CoV-2/human/AUS/VIC852/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T A8651M A11439R C14408T C23039Y A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451597 EPI_ISL_427113,2020-04-04,SARS-CoV-2/human/AUS/VIC853/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C241T C3037T C14408T A23403G CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451598 EPI_ISL_427114,2020-04-04,SARS-CoV-2/human/AUS/VIC854/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- G371K C679Y C1076T G1397A C2434Y G6473S A8073R G8999K T9519C C10030Y G11083T C13356Y T13963Y A15092R G16935K C17939Y C19901Y T20818Y C21741Y C22088Y G22225A C22523M G22661T T24412W T24924Y C25721Y C27964T G28068K T28688C G29742T TACAGTGAA29760- C29774Y GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451599 EPI_ISL_427115,2020-04-04,SARS-CoV-2/human/AUS/VIC856/2020,Australia / Victoria ATTAAAGGTTTATACC1- C241T C1191M C2416T C3037T T12112C C14408T C17690T G21974C A23403G G25563T G26233T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451600 EPI_ISL_427116,2020-04-05,SARS-CoV-2/human/AUS/VIC857/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C683Y C1059T C3037T A3090W C9113Y C14408T A23403G C24374Y G25563T C25572T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451601 EPI_ISL_427117,2020-04-05,SARS-CoV-2/human/AUS/VIC858/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C22523M A23403G C26996T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451602 EPI_ISL_427118,2020-04-05,SARS-CoV-2/human/AUS/VIC860/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G GGG28881AAC CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451603 EPI_ISL_427119,2020-04-05,SARS-CoV-2/human/AUS/VIC862/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G4399K A7479G G11083T C14805T T17247C C25572T G26144T C28887T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451604 EPI_ISL_427120,2020-04-05,SARS-CoV-2/human/AUS/VIC863/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G21800K G22380K A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451605 EPI_ISL_427121,2020-04-05,SARS-CoV-2/human/AUS/VIC864/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C815Y C2416T G2616K C3037T G3179K C6198Y C9700Y T12112C G12331R G13379S C14408T A16942G G21974C G22992K C23059Y A23403G G25563T G26233T A27290R T29038Y C29304M AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451606 EPI_ISL_450215,2020-04-05,SARS-CoV-2/human/AUS/VIC865/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G336K G2468S C3037T C6651S C14408T C15024Y C16733Y C17548Y C17690Y G17944T C21952Y G23016K A23403G C23481Y A23922G A24654R T25051Y A27921W AGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29716- >MT451607 EPI_ISL_427122,2020-04-05,SARS-CoV-2/human/AUS/VIC867/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T T12112C C14408T A16942G G21974C A23403G G25563T G26233T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451608 EPI_ISL_427123,2020-04-05,SARS-CoV-2/human/AUS/VIC868/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C2416T C3037T T12112C C14408T A16942G G21974C A23403G G25563T G26233T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451609 EPI_ISL_427124,2020-04-05,SARS-CoV-2/human/AUS/VIC869/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G1440A G2891A A27669G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451610 EPI_ISL_427125,2020-04-05,SARS-CoV-2/human/AUS/VIC870/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G22895S A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451611 EPI_ISL_427126,2020-04-05,SARS-CoV-2/human/AUS/VIC871/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451612 EPI_ISL_427128,2020-04-05,SARS-CoV-2/human/AUS/VIC873/2020,Australia / Victoria ATTAAAGGTTTATACCT1- C241T C3037T A8651M C14408T C22523M A23403G T23850W G25429T C26461T C27509Y TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451613 EPI_ISL_427129,2020-04-05,SARS-CoV-2/human/AUS/VIC874/2020,Australia / Victoria ATTAAAGGTTTAT1- C241T C3037T C6723T C9112Y C13568T C14408T G18745T A23403G T26094C TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451614 EPI_ISL_427130,2020-04-05,SARS-CoV-2/human/AUS/VIC875/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- T490A C3177T C6285T C8782T C15960T T18736C G19684T G22430K C22450M A23129V C24034T C27635T G28077C T28144C A29031R A29700G TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451615 EPI_ISL_427131,2020-04-05,SARS-CoV-2/human/AUS/VIC876/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G22331K A23403G T27299C GGG28881AAC T29148C TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451616 EPI_ISL_427134,2020-04-06,SARS-CoV-2/human/AUS/VIC879/2020,Australia / Victoria ATTAAAGGTTTA1- C1076T G1397A C9491T G11083T C21658T C22523M C27964T T28688C C29420T G29742T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451617 EPI_ISL_450216,2020-04-06,SARS-CoV-2/human/AUS/VIC880/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTC1- C241T T473Y C3037T G3794K G3878K G4207R C6723T C6843Y T7597Y A11030W G11954K G12031K C14076Y T14361Y G14369K C14408T T15504Y T15510W A15534W T15562Y T16605Y A18448M C18458Y G18546K G18651K G19219K C19789Y T22288Y A22525M A23403G TG24847CT C25916S T26094C C26228Y G28683K C28958Y A29040R G29781K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451618 EPI_ISL_427135,2020-04-06,SARS-CoV-2/human/AUS/VIC881/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G1145A C1191Y A1365R C3037T C5986Y C8079Y A10780R G13379S C14408T G15666R C19269Y G22424R A23403G G27906K GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451619 EPI_ISL_427137,2020-04-06,SARS-CoV-2/human/AUS/VIC884/2020,Australia / Victoria ATTAAAGGTTT1- C241T C3037T A8651M G13379S C14408T C22523M A23403G TAGGGGAACTTCTCC28879- TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451620 EPI_ISL_427138,2020-04-06,SARS-CoV-2/human/AUS/VIC885/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G13576R C14408T A23403G G25563T T29036Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451621 EPI_ISL_427139,2020-04-06,SARS-CoV-2/human/AUS/VIC886/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A C3177T C6285T C8782T T15756Y C15960T C17536Y T18736C G19684T C24034T C27635T G28077C T28144C A29700G CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451622 EPI_ISL_427140,2020-04-06,SARS-CoV-2/human/AUS/VIC887/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- G204K C4455T C8717Y C8917T C13225Y G13379S G13627T C14805T C15540T C17831Y T18477C A23129H G25785R G26144T C26542Y A28338G G28899A T29515Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451623 EPI_ISL_427141,2020-04-06,SARS-CoV-2/human/AUS/VIC888/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T4081Y C4301Y C4784Y T5788W C6250M A9075R C14408T T15465W C18338Y G19285K C20141Y C20143S C20574S A23403G T23434Y G25302K T25304K G25563T C27654Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451624 EPI_ISL_427142,2020-04-06,SARS-CoV-2/human/AUS/VIC890/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T GT5743SY C8782T C9430Y T9477A C14805T C21575T T22136W T22144W A24190R G25979T T28144C C28311T C28657T C28863T T29029Y A29039W CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451625 EPI_ISL_427144,2020-04-06,SARS-CoV-2/human/AUS/VIC892/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T GT5743SY GG5765RS C8782T T9477A G11083K C14805T T19452W T21243W G21334K A22948M T25750Y G25979T T28144C C28311T C28657T C28863T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451626 EPI_ISL_427145,2020-04-06,SARS-CoV-2/human/AUS/VIC893/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C75Y C241T G1001R C1218Y C3037T G3259K C4116Y G5123K C6723T G8351K T11176Y G13379S C14408T G16508K T16780Y A23129R A23403G C23435Y C25100Y T26094C C28462Y A29004M GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451627 EPI_ISL_427146,2020-04-06,SARS-CoV-2/human/AUS/VIC894/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C583Y G611K C1076T G1397A C1594S G2247K G2436K G5375K C5787Y A9874M G11083T G11535K G13043K G13379S G17848K G21686K G22661T C22851S C24517Y G24933K C27964T T28688C G29742T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451628 EPI_ISL_427147,2020-04-06,SARS-CoV-2/human/AUS/VIC895/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A C2455Y C7382Y G10059K G10098K -11075TT G11084T G11527R G20134K C27964T T28688C G29742T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451629 EPI_ISL_427148,2020-04-08,SARS-CoV-2/human/AUS/VIC898/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C G9479T G13379S C14408T A23403G A26864G G29210S C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451630 EPI_ISL_426881,2020-03-24,SARS-CoV-2/human/AUS/VIC912/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T G3564K T7438C C14408T C16393Y A23403G A26864R T28561K C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451631 EPI_ISL_427153,2020-03-27,SARS-CoV-2/human/AUS/VIC920/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G T28561K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451632 EPI_ISL_427155,2020-03-30,SARS-CoV-2/human/AUS/VIC927/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTT1- C241T C1059T C3037T C14408T G17193T A23403G G25563T T28561K G29135K C29409Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451633 EPI_ISL_427156,2020-03-30,SARS-CoV-2/human/AUS/VIC928/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C2523T C3037T C14408T T17190C A23403G G25563T T28561K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451634 EPI_ISL_427157,2020-03-30,SARS-CoV-2/human/AUS/VIC929/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6606Y C10889Y C14408T T15021Y C21327M T22040Y A23403G T28561K TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451635 EPI_ISL_427158,2020-03-30,SARS-CoV-2/human/AUS/VIC930/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C14408T T15021C A20935G A23403G T28561K G29030K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451636 EPI_ISL_427159,2020-03-30,SARS-CoV-2/human/AUS/VIC931/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G10097A C14408T A23403G C23731T T28561K G28580T GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451637 EPI_ISL_427160,2020-03-31,SARS-CoV-2/human/AUS/VIC932/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C1392T C3037T G3251T C14408T C21145Y C22875Y A23403G G25563T C26625T C29061Y C29215Y TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451638 EPI_ISL_430471,2020-03-25,SARS-CoV-2/human/AUS/VIC935/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6312A C9951Y G11083T C13730T T19697Y C23929T C28311T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451639 EPI_ISL_430470,2020-03-25,SARS-CoV-2/human/AUS/VIC936/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T2872C C3037T C13487Y C14408T A23403G GGG28881AAC T29036Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451640 EPI_ISL_430472,2020-03-25,SARS-CoV-2/human/AUS/VIC938/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451641 EPI_ISL_430639,2020-03-26,SARS-CoV-2/human/AUS/VIC942/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2106T C3037T C14408T C15154T A20755C A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451642 EPI_ISL_430640,2020-03-26,SARS-CoV-2/human/AUS/VIC946/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T12010Y C14408T G16221T A17829T C21057Y A23403G A26530G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451643 EPI_ISL_430644,2020-03-26,SARS-CoV-2/human/AUS/VIC947/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059Y G2945R C3037T C3130Y A7626R C7843Y C11916Y G13627K C14408T G17058R G19684K A23144R A23403R G25429K G25563K C25624Y G26466R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451644 EPI_ISL_430647,2020-03-26,SARS-CoV-2/human/AUS/VIC948/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451645 EPI_ISL_430641,2020-03-26,SARS-CoV-2/human/AUS/VIC949/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059Y G2945R C3037T C3130Y C7843Y C11916Y C14408T A23403G G25563K C25624Y G26466R G29032K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451646 EPI_ISL_430646,2020-03-26,SARS-CoV-2/human/AUS/VIC951/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1392Y A2480G C2558T G11083T G13571K C14805T G18255T C22088T G26144T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451647 EPI_ISL_430645,2020-03-26,SARS-CoV-2/human/AUS/VIC953/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6695A C8782T C17747T A17858G C18060T A24694T T28144C TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451648 EPI_ISL_430643,2020-03-26,SARS-CoV-2/human/AUS/VIC955/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C11455T C14408T G21724T T22362Y T22386Y A22481R A23403G GGG28881AAC C29034Y TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451649 EPI_ISL_430529,2020-03-27,SARS-CoV-2/human/AUS/VIC956/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C3037T C14408T C19170T G19509A C20178T A23403G G28077T C28531T GGG28881AAC TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451650 EPI_ISL_430649,2020-03-27,SARS-CoV-2/human/AUS/VIC957/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAG1- C241T C1059Y C3037T C11916Y C14408T A23403G G25563K GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451651 EPI_ISL_430663,2020-03-27,SARS-CoV-2/human/AUS/VIC959/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T G22403R T22423K A23403G G24368T G25563T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451652 EPI_ISL_430648,2020-03-27,SARS-CoV-2/human/AUS/VIC960/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059Y G2945R C3037T C3130Y C7843Y C11916Y C14408T C22414M A23403G G25563K G26466R GGG28881RRS AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451653 EPI_ISL_430654,2020-03-27,SARS-CoV-2/human/AUS/VIC961/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C6310A C6312A A9433G C13730T T19035A C19524T C23929T C28311T T29793C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451654 EPI_ISL_430656,2020-03-27,SARS-CoV-2/human/AUS/VIC962/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059Y C2485Y G2945R C3037T C3130Y G11365K C11916Y C14408T A16011R C21772Y T22408Y A23403G C24134Y A24862R G25563K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451655 EPI_ISL_430655,2020-03-27,SARS-CoV-2/human/AUS/VIC964/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C T11731Y C14408T T15166C A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451656 EPI_ISL_430650,2020-03-27,SARS-CoV-2/human/AUS/VIC965/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059Y G2945R C3037T C3130Y C7843Y C11916Y C14408T C16289Y G17562K A23403G G25563K C25624Y G26466R GGG28881RRS CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451657 EPI_ISL_430653,2020-03-27,SARS-CoV-2/human/AUS/VIC966/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C3096T G4960R T5820Y G13627T C14805T C15540T A19175R G26144T A28338G A29005R G29212T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451658 EPI_ISL_430660,2020-03-27,SARS-CoV-2/human/AUS/VIC967/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1862T C3037T C14408T G16221T A17829T A22460R A23403G A26530G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451659 EPI_ISL_430651,2020-03-27,SARS-CoV-2/human/AUS/VIC968/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C3037Y C3096T G11083K G13627K C14408Y C14805T C15540Y G25563K G26144K A28338R G29212T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451660 EPI_ISL_430652,2020-03-27,SARS-CoV-2/human/AUS/VIC969/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241Y C1059Y G2945R C3037Y C3130Y C7843Y G11083K C11916Y G13627K C14408Y C14805Y C15540Y A19368W G21394K A23403R A24121R G25563K C25624Y G26144K G26466R T28144Y A28338R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451661 EPI_ISL_430662,2020-03-27,SARS-CoV-2/human/AUS/VIC970/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241Y C1059Y C3037Y C3130Y A7479R C7843Y G11083K C14408Y C14805T T17247Y G25563K C25572Y G26144K C28887T G29810K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451662 EPI_ISL_430661,2020-03-27,SARS-CoV-2/human/AUS/VIC971/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G680A C3037T C14408T A23403G TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451663 EPI_ISL_430657,2020-03-28,SARS-CoV-2/human/AUS/VIC973/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241Y C1059Y C2536Y G2945R C3037T C3130Y C3177Y G4127R C7843Y C11916Y G13627K C14408Y C14805Y C15540Y A23403R G25563K G26144K G26466R A28338R G29338S CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451664 EPI_ISL_430659,2020-03-28,SARS-CoV-2/human/AUS/VIC974/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G A26864G C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451665 EPI_ISL_430658,2020-03-28,SARS-CoV-2/human/AUS/VIC975/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C3037T T7438C C14408T T15166C C22523S A23403G A26864G C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451666 EPI_ISL_430542,2020-03-29,SARS-CoV-2/human/AUS/VIC978/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGG1- C4540T C8782T T9477A C14805T G23909K G25979T T28144C C28311T C28657T C28863T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451667 EPI_ISL_430543,2020-03-30,SARS-CoV-2/human/AUS/VIC982/2020,Australia / Victoria ATTAAAGGTTTATACCTT1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451668 EPI_ISL_430545,2020-03-30,SARS-CoV-2/human/AUS/VIC983/2020,Australia / Victoria ATTA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451669 EPI_ISL_430552,2020-03-30,SARS-CoV-2/human/AUS/VIC984/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T C17403T C21711T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451670 EPI_ISL_430554,2020-03-30,SARS-CoV-2/human/AUS/VIC985/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C6606Y C14120Y C14408T T15021Y A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451671 EPI_ISL_430557,2020-03-30,SARS-CoV-2/human/AUS/VIC986/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- T1368C C6990T G11083T C14805T C20736T C23707T C23996T G25598T G26144T C29034Y C29178S CA29187YR AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451672 EPI_ISL_430558,2020-03-30,SARS-CoV-2/human/AUS/VIC987/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T T22417K A23403G G25563T TTTAGCACTCAATTTGCTTTT27568- A29015W TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451673 EPI_ISL_430544,2020-03-31,SARS-CoV-2/human/AUS/VIC988/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1385Y A1547W A2285R C3037T A3336M T6808Y C11499Y A11667R G12859K A12920M G13612S C14408T G16855R G17741K G19394K A20055H C20441Y G20578K G22857K C23298S A23403G G24197K A25136R G25429T G25555K A27315R TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451674 EPI_ISL_430551,2020-03-31,SARS-CoV-2/human/AUS/VIC989/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G A26864G C27630T C29353T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451675 EPI_ISL_430556,2020-03-31,SARS-CoV-2/human/AUS/VIC990/2020,Australia / Victoria ATTAAAG1- C241T C1059T C2523T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451676 EPI_ISL_430474,2020-03-31,SARS-CoV-2/human/AUS/VIC991/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G8179K C14408T C19017Y A20535R A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451677 EPI_ISL_430475,2020-03-31,SARS-CoV-2/human/AUS/VIC992/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C1076T G1397A A8031R -11075TT G11084T C12763Y A14870G G17790R T25316C C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451678 EPI_ISL_430477,2020-03-31,SARS-CoV-2/human/AUS/VIC993/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C4540T C8782T T9477A C14805T C17850Y C21789Y A23902R G25979T T28144C C28311T C28657T C28863T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451679 EPI_ISL_430478,2020-03-31,SARS-CoV-2/human/AUS/VIC994/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T G10310A C14408T T14700C C17072Y A23403G C25350T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT451680 EPI_ISL_430479,2020-03-31,SARS-CoV-2/human/AUS/VIC995/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C4540T C8782T T9477A C14805T C17470Y G17632A G25979T T28144C C28311T C28657T C28863T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451681 EPI_ISL_430480,2020-03-31,SARS-CoV-2/human/AUS/VIC996/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C228T G1397A G9479T A9514G G11083T G20247T G26720C T28688C T28835C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451682 EPI_ISL_430481,2020-03-31,SARS-CoV-2/human/AUS/VIC997/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A20268G A23403G G29734C CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451683 EPI_ISL_430482,2020-03-31,SARS-CoV-2/human/AUS/VIC998/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C12513T C14408T A23403G G25563T G25593C G27214T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451684 EPI_ISL_430484,2020-03-31,SARS-CoV-2/human/AUS/VIC1000/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T T7438C C14408T T15166C A21137G A23403G A26864G A28259G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451685 EPI_ISL_430485,2020-03-31,SARS-CoV-2/human/AUS/VIC1001/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A5898W C14408T C15324T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451686 EPI_ISL_430486,2020-03-31,SARS-CoV-2/human/AUS/VIC1002/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451687 EPI_ISL_430487,2020-03-31,SARS-CoV-2/human/AUS/VIC1003/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C6525Y T7438C C14408T T15166Y C22077Y T22118K A22123R A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451688 EPI_ISL_430488,2020-03-31,SARS-CoV-2/human/AUS/VIC1004/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T3808C A6332R T7438C C7834Y G9479T C14408T A23403G T26418W A26864G C29353T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451689 EPI_ISL_430491,2020-03-31,SARS-CoV-2/human/AUS/VIC1005/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C8770Y T8774W A8780R C14408T A23403G G25563T G25593C G29041S AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451690 EPI_ISL_430473,2020-03-31,SARS-CoV-2/human/AUS/VIC1008/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C15324T A23403G C25831T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451691 EPI_ISL_430560,2020-04-01,SARS-CoV-2/human/AUS/VIC1010/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G960A C1059T C3037T T4597Y C14408T A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451692 EPI_ISL_430547,2020-04-01,SARS-CoV-2/human/AUS/VIC1011/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C2937T C3037T C14408T C19402Y A20268G A23403G C24096Y C28887Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451693 EPI_ISL_430548,2020-04-01,SARS-CoV-2/human/AUS/VIC1012/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T G23342A A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451694 EPI_ISL_430553,2020-04-01,SARS-CoV-2/human/AUS/VIC1013/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2937T C3037T C14408T A20268G C22414M A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451695 EPI_ISL_430555,2020-04-01,SARS-CoV-2/human/AUS/VIC1014/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T T6163Y C10543T C14408T A15248R A20268G A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451696 EPI_ISL_430559,2020-04-01,SARS-CoV-2/human/AUS/VIC1015/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C5467T C14408T A23403G G25563T C27964T G28882T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451697 EPI_ISL_430476,2020-04-01,SARS-CoV-2/human/AUS/VIC1016/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C6310A C6312A A9433G G11083T C13730T C19524T C23929T C28311T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451698 EPI_ISL_430489,2020-04-01,SARS-CoV-2/human/AUS/VIC1017/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T C4777Y T7438C C14408T A23403G T24152C C29353T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451699 EPI_ISL_430490,2020-04-01,SARS-CoV-2/human/AUS/VIC1018/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C15324T G19021K G22918T A23403G G28690T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451700 EPI_ISL_430492,2020-04-01,SARS-CoV-2/human/AUS/VIC1020/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCA1- C241T C311Y C3037T C5544Y T8359Y G10097A G10119K C13356Y A15831G T17872K A19430R G21448S A23403G C23731T C25100Y G28580T C28775Y GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451701 EPI_ISL_430493,2020-04-01,SARS-CoV-2/human/AUS/VIC1021/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTG1- C241T C635Y G1697K G1757K C3037T C6285Y C6336S C9207Y C9561Y C9582Y C10279Y C14408T T14952Y C15324T C17733Y T18200Y C20480Y G21770K C22675Y A23403G C23912Y A27507R G28690T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451702 EPI_ISL_430530,2020-04-02,SARS-CoV-2/human/AUS/VIC1023/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A A1168W C3177T C6285T C8782T C15960T T18736C G19684T C24034T C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451703 EPI_ISL_430531,2020-04-02,SARS-CoV-2/human/AUS/VIC1024/2020,Australia / Victoria AT1- C241T C1059T C3037T A8879R C14408T G22442S A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451704 EPI_ISL_430532,2020-04-02,SARS-CoV-2/human/AUS/VIC1025/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451705 EPI_ISL_430664,2020-04-02,SARS-CoV-2/human/AUS/VIC1030/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCC1- C241T C635Y C3037T T7438C C14408T T15166C C22875Y A23403G A26864G C29353T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451706 EPI_ISL_430665,2020-04-02,SARS-CoV-2/human/AUS/VIC1032/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T7438C C14408T T15166C A17770W A23403G A26864G A29319M C29353T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451707 EPI_ISL_430537,2020-04-03,SARS-CoV-2/human/AUS/VIC1033/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A5789M A13631W G13639K C14408T C19269Y A20268G A23403G G29734C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451708 EPI_ISL_430533,2020-04-03,SARS-CoV-2/human/AUS/VIC1037/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C3261T C14408T C20320T A23403G GGG28881AAC G29254T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451709 EPI_ISL_430534,2020-04-03,SARS-CoV-2/human/AUS/VIC1038/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C3037T C3817Y C14408T A22356R A23403G C26996T GGG28881AAC TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451710 EPI_ISL_430535,2020-04-03,SARS-CoV-2/human/AUS/VIC1039/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T6427C C6573T C14408T A23403G C25528T GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451711 EPI_ISL_430536,2020-04-03,SARS-CoV-2/human/AUS/VIC1041/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C29738T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT451712 EPI_ISL_430538,2020-04-03,SARS-CoV-2/human/AUS/VIC1042/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G8852A G11083T T22451W C27964T T28688C G29742T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451713 EPI_ISL_430539,2020-04-03,SARS-CoV-2/human/AUS/VIC1043/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T T14466K C27964T T28688C G29742T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451714 EPI_ISL_430540,2020-04-03,SARS-CoV-2/human/AUS/VIC1044/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- G1440A G2891A C14898T A27669G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451715 EPI_ISL_430546,2020-04-03,SARS-CoV-2/human/AUS/VIC1045/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T T13638W C14408T C15810Y A23128M A23403G G25563T C28253Y A28336W C28432Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451716 EPI_ISL_430550,2020-04-03,SARS-CoV-2/human/AUS/VIC1046/2020,Australia / Victoria ATTAA1- C241T C1059T C3037T C14408T G23311T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451717 EPI_ISL_430561,2020-04-03,SARS-CoV-2/human/AUS/VIC1047/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T T7438C C14408T A22053M C23130Y A23148M A23403G C25300Y A26864G C29203Y G29300S C29353T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451718 EPI_ISL_430562,2020-04-03,SARS-CoV-2/human/AUS/VIC1048/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T T15166C A23403G T25111Y A26864G G29123S CT29205SW C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451719 EPI_ISL_430563,2020-04-03,SARS-CoV-2/human/AUS/VIC1049/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T T6457Y T7438C C14408T T15166C T21226H A23403G A26864G C29013Y C29353T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451720 EPI_ISL_430599,2020-04-03,SARS-CoV-2/human/AUS/VIC1050/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G558K A846M G1158K C3037T G3167K C3176T G3509K G4146K T4858W G5384K G5953K T6893Y C7072Y T7438C C7528Y T7818Y G8018K T8559W T9354Y T11076Y G11358K C11594Y G13379S C14408T G15150K T15166C C15963Y G16117S G16246K CTACAG18374YYWMMR G19877K G20569K G20627S C22689Y C23191M A23403G A23667W C23745Y T24126Y G24140K A24485W C24899Y G26727K G26774K A26864G C26919Y C28253Y GG28325KK G28452K C28490Y C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451721 EPI_ISL_430666,2020-04-03,SARS-CoV-2/human/AUS/VIC1054/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T T3930W T4087Y T7438C C13038Y C14408T A23403G A23667R A26864G C29353T G29425K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451722 EPI_ISL_430667,2020-04-03,SARS-CoV-2/human/AUS/VIC1055/2020,Australia / Victoria AT1- C241T C3037T C6723T T8816K C14408T C23054M A23403G T26094C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451723 EPI_ISL_430669,2020-04-03,SARS-CoV-2/human/AUS/VIC1056/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C3037T T7438C C14408T A21944T A22490W A23403G C29353T TAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29851- >MT451724 EPI_ISL_430668,2020-04-03,SARS-CoV-2/human/AUS/VIC1057/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTA1- C3634T C8782T C11950T C17747Y A17858G C18060T G24236K T28144C AC29761- GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451725 EPI_ISL_430549,2020-04-04,SARS-CoV-2/human/AUS/VIC1061/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T G29041S AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451726 EPI_ISL_430578,2020-04-04,SARS-CoV-2/human/AUS/VIC1062/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T13210C G13348T C14408T A20268G A23403G G29260T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451727 EPI_ISL_430672,2020-04-04,SARS-CoV-2/human/AUS/VIC1064/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T7438C C14408T T15166C T21226D A23403G A26864G C29353T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451728 EPI_ISL_430670,2020-04-04,SARS-CoV-2/human/AUS/VIC1067/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A23403G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451729 EPI_ISL_430671,2020-04-04,SARS-CoV-2/human/AUS/VIC1068/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C344Y C3037T T7438C A8821M C14408T T15166C A17207R A23403G A26864G C27294Y C29353T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451730 EPI_ISL_430581,2020-04-05,SARS-CoV-2/human/AUS/VIC1071/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G680A C3037T C14408T A23403G CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451731 EPI_ISL_430564,2020-04-06,SARS-CoV-2/human/AUS/VIC1078/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G10870K C14408T C21648T A23403G C23673T G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451732 EPI_ISL_430565,2020-04-06,SARS-CoV-2/human/AUS/VIC1079/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- T490A C1848Y C3177T C4586Y C6285T C8782T T14233W C15960T T18736C G19684T C24034T C27635T G28077C T28144C G29017S A29700G TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451733 EPI_ISL_430579,2020-04-06,SARS-CoV-2/human/AUS/VIC1080/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T T8068C C14408T G16221A A23083G A23403G G25563T TCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29856- >MT451734 EPI_ISL_430580,2020-04-06,SARS-CoV-2/human/AUS/VIC1081/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1758Y C3037T T7438C C14408T T15166C A23403G A26864G C29353T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451735 EPI_ISL_430587,2020-04-06,SARS-CoV-2/human/AUS/VIC1085/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- T1368C T1501W C6990T G11083T C14554Y C14805T C20736T C22295Y C23707T C23996T G25598T G26144T C27925M AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451736 EPI_ISL_430597,2020-04-06,SARS-CoV-2/human/AUS/VIC1086/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G C29353T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451737 EPI_ISL_430574,2020-04-06,SARS-CoV-2/human/AUS/VIC1087/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1404T G4225R C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451738 EPI_ISL_430673,2020-04-06,SARS-CoV-2/human/AUS/VIC1089/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T G8102T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451739 EPI_ISL_430582,2020-04-07,SARS-CoV-2/human/AUS/VIC1092/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G2441R C2841Y C3037T C3041Y G4272K G4854K G5555K C6120Y A6275W A6733M T7816Y A9926W T10390Y T10711Y A13288M T13902K C14408T G15937K T15950Y C17456Y T18696Y C18747Y G18756K G20128K T22548Y A23403G C24759S G24933K G25429T A26120W C26461T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451740 EPI_ISL_430583,2020-04-07,SARS-CoV-2/human/AUS/VIC1094/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- A187G C241T C3037T G3564K C14408T A23403G C25916T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451741 EPI_ISL_430589,2020-04-07,SARS-CoV-2/human/AUS/VIC1098/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C527Y A1460M G1820A GTT3345- A4783R G4841S G6101A C9374Y C11328M A12337R G13379S A13628M T13701C C14805T A17823W A17844W G18290S G18525S G21372K T21406W C23707T T23817Y G24527K A24661W C25546Y G26144T C26176Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451742 EPI_ISL_430584,2020-04-07,SARS-CoV-2/human/AUS/VIC1103/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T C29774Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451743 EPI_ISL_430585,2020-04-07,SARS-CoV-2/human/AUS/VIC1104/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C4540T C8782T T9477A C14805T G25979T T26552Y T28144C C28311T C28657T C28863T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451744 EPI_ISL_430586,2020-04-07,SARS-CoV-2/human/AUS/VIC1105/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T A7626R C14408T A23403G A27607R A27609W C27812T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451745 EPI_ISL_430588,2020-04-07,SARS-CoV-2/human/AUS/VIC1106/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C635Y C1059T C1642Y C3037T C14408T C16343T C17326T A23403G G25563T G26792R C27577Y C27964T C28253Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451746 EPI_ISL_430590,2020-04-07,SARS-CoV-2/human/AUS/VIC1107/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T T7438C C14408T A21944T A23403G C25553Y C29353T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451747 EPI_ISL_430591,2020-04-07,SARS-CoV-2/human/AUS/VIC1108/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T7438C G13379S C14408T A23403G C29353T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451748 EPI_ISL_430618,2020-04-07,SARS-CoV-2/human/AUS/VIC1109/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T T8068C C14408T G16221A A23083G A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451749 EPI_ISL_430569,2020-04-07,SARS-CoV-2/human/AUS/VIC1110/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T G8102T T8767Y C14408T A22330W G22332K T22441K A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451750 EPI_ISL_430570,2020-04-07,SARS-CoV-2/human/AUS/VIC1111/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G942R C1059T G1805R C3037T T3385Y A5308R C5986Y C10782Y C12053Y C12781Y G13156K T13400Y C14408T T16576Y A20116R A20649M C20740Y G21881K A23403G T24583Y C25046Y G25563T G25740K G26316K G27258K TG28575WR G28713K C29364T T29758W CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451751 EPI_ISL_430573,2020-04-07,SARS-CoV-2/human/AUS/VIC1112/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451752 EPI_ISL_430575,2020-04-07,SARS-CoV-2/human/AUS/VIC1113/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T A3934R T8068C C9474Y C14408T G16221A A23083G A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451753 EPI_ISL_430576,2020-04-07,SARS-CoV-2/human/AUS/VIC1114/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G10634K G11083T C16646Y C16658Y C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451754 EPI_ISL_430577,2020-04-07,SARS-CoV-2/human/AUS/VIC1115/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T G16360R TT22469YW G22493S C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451755 EPI_ISL_430567,2020-04-08,SARS-CoV-2/human/AUS/VIC1119/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T A9707G C14408T C18877T A23403G G25563T C25810T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451756 EPI_ISL_430594,2020-04-08,SARS-CoV-2/human/AUS/VIC1120/2020,Australia / Victoria ATTAAAGGTTT1- C241T C1059T C3037T A6705R G8943K C11022Y G13379B G13654K C14408T A21993W T23159Y A23403G A24361R A24408R C25117Y G25563T A25998W C26764M C27131Y AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451757 EPI_ISL_430595,2020-04-08,SARS-CoV-2/human/AUS/VIC1121/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C635Y C1059T T1994Y G2534K C3037T A4141W T5290Y A5829W A5877R C6213Y C7303Y T7663Y A10767R C11752Y T11843Y A13931W C14408T T17859K A17889R G20086K T22136K C22212M T22576K A23403G C23435Y A23493R T23830Y G24305S G24521S G25173R C25184Y C25521Y G25563T G25906K C26044Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451758 EPI_ISL_430608,2020-04-08,SARS-CoV-2/human/AUS/VIC1127/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C337Y T447Y C1063M C1332Y A1435R C1722Y G1730R C1997Y A2254W C3037T T3136W C4065Y G4205K G4207R G4286K T4462Y A5423W C5643Y G6236K C6633Y C6813Y C7011Y T7166Y C7279Y G7620K T7623K A7626R G7667K A7799W C8748Y G9620K C10052Y C10525Y G10772R G10806K G11083K G11150S G11161S G11292K C11499Y G11502K C12774Y C14408T C14768Y C14793Y G14989S G15004K A15489R G15907K G16009K C16234Y T16545Y C16580Y A17066W C18582Y C18775Y C18841Y G19235K G19726S G20487K C20790Y T21738Y C21742M G23285S A23403G C23565Y C23766Y G24000K C24483Y G24882K G24947K C25546Y C25609Y C26964Y A27109W C28411Y C28486Y C28603Y G28668K G28713K C28744Y C28868Y GGG28881AAC C29627Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451759 EPI_ISL_430592,2020-04-08,SARS-CoV-2/human/AUS/VIC1131/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T A2317R C3037T T7438C C10778Y C14408T G17325K A23403G A26864G C29353T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451760 EPI_ISL_430596,2020-04-08,SARS-CoV-2/human/AUS/VIC1133/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T1368C C6990T G11083T C14805T C20736T C23707T C23996T G25598T G26144T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451761 EPI_ISL_430600,2020-04-08,SARS-CoV-2/human/AUS/VIC1134/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C8991T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451762 EPI_ISL_430601,2020-04-08,SARS-CoV-2/human/AUS/VIC1135/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T C13115Y C14408T G16700T A23403G G25563T C27964T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451763 EPI_ISL_430606,2020-04-08,SARS-CoV-2/human/AUS/VIC1136/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C1931Y G7067K G11083T T13633Y C13946Y C13957Y C14805T T17247C C17852Y C21145Y A22013R G25311K C26110T G26144T G28122A T28693Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451764 EPI_ISL_430607,2020-04-08,SARS-CoV-2/human/AUS/VIC1137/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T G6536K C7267Y C14408T A23403G C23655Y G25563T C28868Y CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451765 EPI_ISL_430609,2020-04-08,SARS-CoV-2/human/AUS/VIC1138/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T G23302K A23403G GGG28881AAC CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451766 EPI_ISL_430610,2020-04-08,SARS-CoV-2/human/AUS/VIC1139/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G8185A C14408T T17380C T21931C A23403G C23785T G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451767 EPI_ISL_430611,2020-04-08,SARS-CoV-2/human/AUS/VIC1140/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T G4088K C4938Y C6896Y G8185A T11116Y C14408T T17380C T21931C A23403G C23785T G25314K G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451768 EPI_ISL_430612,2020-04-08,SARS-CoV-2/human/AUS/VIC1141/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T T7438C G10704R T13434W G13448R G13470R C14408T G18624K G19582K T21120K C21736Y A23403G C23638Y C24213Y C28253Y C28411Y C29353T C29754Y CCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29835- >MT451769 EPI_ISL_430613,2020-04-10,SARS-CoV-2/human/AUS/VIC1142/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T T7438C C14408T G17926S A23403G C29353T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451770 EPI_ISL_430614,2020-04-08,SARS-CoV-2/human/AUS/VIC1143/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T A8533G C14408T A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451771 EPI_ISL_430619,2020-04-08,SARS-CoV-2/human/AUS/VIC1144/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A G11083T C16658Y C27964T T28688C G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451772 EPI_ISL_430620,2020-04-08,SARS-CoV-2/human/AUS/VIC1145/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C1076T G1397A A2510R G11083T T22965Y C27964T T28688C G29219S G29742T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451773 EPI_ISL_430603,2020-04-09,SARS-CoV-2/human/AUS/VIC1151/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T279Y G970K G1228K G1233K C1609Y G1676K A1992W C3037T C3429Y A3517W G3620K T3679W T3766Y C3773Y G3782K G4133K A4177M C4400Y G5555K A6073W G7273K G7571K G9177K T9229Y T10141Y T10843K C11460Y G11634S A12271W G12322R C12672Y G12833K C13775Y C14206Y C14408T A15213W C16022Y T16088Y G16117K T16649Y C17024Y C18247Y T18688Y T18974Y T19138K G19333K T19510Y G19518K C19554Y G19925K G20438K A21229W G21796K G21848K T22711Y G23224K C23315Y A23403G C23655Y C23685Y C23757Y C23896Y G24173K G24868K G25471K T25554K T26355Y G26520K C26522Y G26529K T26543Y A26734M C26863Y G26888K C27812T A28864D GGG28881AAC G29494K C29754Y CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451774 EPI_ISL_430622,2020-04-09,SARS-CoV-2/human/AUS/VIC1156/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- G160K C241T C1471Y C1766Y C3037T C5219Y C5310Y C9411Y T9787Y G10870K C11479Y C14408T C17093Y G18021R T21237K C21696Y A23403G A24180W T24643W T25422K C29739T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451775 EPI_ISL_430598,2020-04-09,SARS-CoV-2/human/AUS/VIC1157/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7438C C14408T A23403G A26864G C29353T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451776 EPI_ISL_430602,2020-04-09,SARS-CoV-2/human/AUS/VIC1158/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G C27812T GGG28881AAC GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT451777 EPI_ISL_430604,2020-04-09,SARS-CoV-2/human/AUS/VIC1159/2020,Australia / Victoria ATTAAAGGTTTATACC1- C241T C1059T C3037T C14408T A23403G G25563T G26959A C27964T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT451778 EPI_ISL_430605,2020-04-09,SARS-CoV-2/human/AUS/VIC1160/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C6286Y C14408T A23403G G25563T G26959A C27964T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451779 EPI_ISL_430615,2020-04-09,SARS-CoV-2/human/AUS/VIC1161/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C18744T A23403G G25563T C25572T C29284T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT451780 EPI_ISL_430616,2020-04-09,SARS-CoV-2/human/AUS/VIC1162/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451781 EPI_ISL_430617,2020-04-09,SARS-CoV-2/human/AUS/VIC1163/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- G386K G558K G660K G663K C1076T G1397A G1406K G2036K G2604K G3004K G3251K G3564K G4505K G4663S G4854K A5212R G5375K G5378K C6468Y G6804K G7038K G7214K G7246K G8696K G9141K G9249K C10198Y G10379K G10986K -11075TT G11084T G11535K G12164K G12833K G13240K G13571K G14277K C14536Y G14548R G15199K G15202K G15769K G16188K G17096K C17518Y C17738Y G17849K G18017K G18297K G19252K G19480K C22425Y G22859K G23162K C23766Y G23858K G24557K G24933K C25047S C27964T G28077K G28079K G28086K G28089K G28109K G28517K G28559K T28688C G29041K G29742T G29779K G29781K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451782 EPI_ISL_430624,2020-04-09,SARS-CoV-2/human/AUS/VIC1164/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1594T C3037T C8290T C11109T C14408T C18788T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451783 EPI_ISL_430623,2020-04-10,SARS-CoV-2/human/AUS/VIC1174/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T T22979K A23403G G25563T G26959A C27964T T29288Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451784 EPI_ISL_430625,2020-04-10,SARS-CoV-2/human/AUS/VIC1175/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1594T C3037T C8290T T8791Y C11109T C14408T C18788T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451785 EPI_ISL_430630,2020-04-10,SARS-CoV-2/human/AUS/VIC1176/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T A10821M T13649Y C14408T C14889Y G15439K A16010W C22445M A22473R A23403G G29033K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451786 EPI_ISL_430674,2020-04-10,SARS-CoV-2/human/AUS/VIC1178/2020,Australia / Victoria ATTAAAGGTTTATACCT1- A31R C241T T2327Y C3037T G8102T G14383T C14408T G14831K G15444K C20270Y T22441Y A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451787 EPI_ISL_430626,2020-04-11,SARS-CoV-2/human/AUS/VIC1180/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G1048R C1214Y G1406K C1568Y G1980K C3037T C3241Y T7377W C7528Y A7626R G8600S C8917Y G9277K C9451Y T9884Y G10086R A10773R C10824Y C11756Y A11975W G12239K A12273W G12322K A12949W C14408T G14720K A20036W G20627K G23162K A23403G C23855Y G24557K G26526K G26720S G27112S G27514K G28086K C28312Y G28361K GGG28881AAC G28917K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451788 EPI_ISL_430627,2020-04-11,SARS-CoV-2/human/AUS/VIC1181/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C203Y C241T C2669M C3037T C4551Y C4887Y G5164K G5453R G5555R T7623K A7626R C8921Y C9534S T11075Y G13379S G13836K C14408T C17125T T17838K C18329T C23127M A23403G G23867K G24200R G24858S A25094R G25951K C27002Y T27485K C27812T G27877T GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451789 EPI_ISL_430628,2020-04-11,SARS-CoV-2/human/AUS/VIC1183/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- A143R C241T C1166Y C3037T T4823Y C5115T T6511Y C6982Y T9172Y G10105R C12357M C14408T T14952Y G15508K C17125T C23334M A23403G T24544Y C24989Y G25019K G25278K G26501S C27812T G27877T GGG28881AAC T29035Y TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT451790 EPI_ISL_430629,2020-04-11,SARS-CoV-2/human/AUS/VIC1186/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C6723T A13526W C14408T T22423Y A23403G T26094C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451791 EPI_ISL_430675,2020-04-11,SARS-CoV-2/human/AUS/VIC1187/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C10851T C14408T C17710Y A23403G G25563T C26542Y G27632T C28849T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451792 EPI_ISL_430521,2020-03-23,SARS-CoV-2/human/AUS/VIC1189/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C6312A G11083T C13730T C19524T C23929T G27163T C28311T G29266S AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451793 EPI_ISL_430528,2020-03-30,SARS-CoV-2/human/AUS/VIC1192/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C25572T G27556K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451794 EPI_ISL_430506,2020-03-31,SARS-CoV-2/human/AUS/VIC1197/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C3037T G11083K C11235M C14408T A23403G TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451795 EPI_ISL_430507,2020-03-31,SARS-CoV-2/human/AUS/VIC1198/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1594T C3037T C3768Y C8290T C11109T C14408T G15910K C18788T A23403G G25563T G29399T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT451796 EPI_ISL_430523,2020-03-31,SARS-CoV-2/human/AUS/VIC1199/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T G6483R C14408T A23403G G25563T C26110Y C28775Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451797 EPI_ISL_430527,2020-03-31,SARS-CoV-2/human/AUS/VIC1200/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C8782T A9274R C12672Y C13255Y C17747Y A17858G C18060T A24694T T28144C A28594R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451798 EPI_ISL_430509,2020-04-01,SARS-CoV-2/human/AUS/VIC1203/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C157Y C379Y G500K G558K G1018K G1074K C1076T G1172K C1185S G1397A C1625Y G1743K G2036S G2204R G2687K A3219R G3230K G3407K G3564K A3868R G4657K G4988K G5199S A5462M C5694Y C5697Y C6317M C6541Y A6785M G7400K G7693K G8550K G8553K T8940Y T9016Y G9137K T9167Y C9198Y G10091K G10590K C10641Y T10676Y C11074Y G11083T T11098Y G11535K G11837T G12243K G12310K G12867K G12887K G12930K G14047K T14104W G14277K G14720K G14773K G15444K G16189K C16498Y G16508K C16691Y T16854Y G17309K G17334K C17492Y G17669K G18634K G18643K C18707Y A19008W C20095Y G21686K G22217R C22624S C22710Y T23189Y C23291Y C23601S A23738W G23873K G24410K G24557K G24933K A25026W G25677K A25697M T25750Y C25797M C26029Y C26039M A26910M G27514K G27583S G27632R C27688Y C27925Y C27964T C27998Y G28077K G28166K G28300K G28478K G28614K T28688C AGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29687- >MT451799 EPI_ISL_430498,2020-04-01,SARS-CoV-2/human/AUS/VIC1208/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T T12182Y C14408T C16329T A18639G A23403G C23536T G25563T C25731T C29625T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451800 EPI_ISL_430499,2020-04-01,SARS-CoV-2/human/AUS/VIC1209/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C7834T T9172C A10948G C14408T G16741T A23403G G26730T GGG28881AAC TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451801 EPI_ISL_430500,2020-04-01,SARS-CoV-2/human/AUS/VIC1210/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C1076T G1397A G11083T C27964T T28688C G29742T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451802 EPI_ISL_430501,2020-04-01,SARS-CoV-2/human/AUS/VIC1211/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C1059T C3037T C14408T T23371C A23403G C24797T G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451803 EPI_ISL_430502,2020-04-01,SARS-CoV-2/human/AUS/VIC1212/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C2416T C3037T G4510T C7765T C14408T G18756K C19438Y C19545Y C19547Y G20578T C21145Y C21214Y C21297Y C21381Y C21386H C22313Y C22875Y C23117Y A23403G G25563T G27670T C29028Y C29034Y C29037Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451804 EPI_ISL_430503,2020-04-01,SARS-CoV-2/human/AUS/VIC1213/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C2416T C3037T G4510T C7765T T8421Y C14408T C19273Y C19572Y G20578T C21145Y C22009Y C22875Y C23061Y A23403G G25563T G27670T C29028Y C29034Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451805 EPI_ISL_430505,2020-04-01,SARS-CoV-2/human/AUS/VIC1214/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C15324T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451806 EPI_ISL_430508,2020-04-01,SARS-CoV-2/human/AUS/VIC1215/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C1346Y C3037T A13760M C14408T G22203T A23403G G25563T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT451807 EPI_ISL_430513,2020-04-01,SARS-CoV-2/human/AUS/VIC1216/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAG1- C241T C1059T C3037T C14408T A23403G T24436Y G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451808 EPI_ISL_430515,2020-04-01,SARS-CoV-2/human/AUS/VIC1218/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTT1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451809 EPI_ISL_430516,2020-04-01,SARS-CoV-2/human/AUS/VIC1219/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATC1- C241T C1594T C3037T C8290T C11109T C14408T C18788T C21658Y A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451810 EPI_ISL_430517,2020-04-01,SARS-CoV-2/human/AUS/VIC1220/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C6695A C8782T C17747T A17858G C18060T A24694T T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451811 EPI_ISL_430518,2020-04-01,SARS-CoV-2/human/AUS/VIC1221/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C635Y C683Y C6695A C8782T C13883Y C17747Y A17858G C18060T G23012K A24694T T28144C C29091Y TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451812 EPI_ISL_430519,2020-04-01,SARS-CoV-2/human/AUS/VIC1222/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451813 EPI_ISL_430522,2020-04-01,SARS-CoV-2/human/AUS/VIC1224/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T A23403G TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT451814 EPI_ISL_430520,2020-04-02,SARS-CoV-2/human/AUS/VIC1228/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T T2414W C2523T C3037T A3945M C4113Y G12191K G12714K A14193W C14408T G20113K G20998S C22560M C23249Y A23403G C23520Y G23900S G24497K G25563T C27389Y TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451815 EPI_ISL_436688,2020-04-02,SARS-CoV-2/human/AUS/VIC1230/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- T490A A1168W C3177T C6285T C8782T C15960T T18736C G19684T C24034T C27635T G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451816 EPI_ISL_430510,2020-04-02,SARS-CoV-2/human/AUS/VIC1233/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C1076T G1397A G11083T C11832T C13443Y G22494K C27964T T28688C G29742T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT451817 EPI_ISL_430511,2020-04-02,SARS-CoV-2/human/AUS/VIC1234/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C313T C3037T C14408T T20064C A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451818 EPI_ISL_430512,2020-04-02,SARS-CoV-2/human/AUS/VIC1235/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C6695A C8782T C17747T A17858G C18060T A24694T T28144C AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT451819 EPI_ISL_430524,2020-04-02,SARS-CoV-2/human/AUS/VIC1236/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C635Y C1469T C1601Y G2001S C2462Y C3037T C3096Y G6240S T7438C C10993Y G12674K C14408T A19941G A23403G C25521Y C25831Y A26864G C28603Y C28629Y C29353T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT451820 EPI_ISL_430525,2020-04-02,SARS-CoV-2/human/AUS/VIC1237/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C2262Y C8782T A16687R C17747Y A17858G C18060T C19185Y A24694T C26606Y T28144C AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451821 EPI_ISL_430526,2020-04-02,SARS-CoV-2/human/AUS/VIC1239/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G256R T2643K C3037T C5654Y C6723T A7626R C14408T A21456R A21547R A23403G T26094C G28476T A28885R G29781K G29798K CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451822 EPI_ISL_436111,2020-04-07,SARS-CoV-2/human/AUS/VIC1244/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T89Y C241T G347K G2354K C3037T T4732Y A6331R C7528S A7626R C9180Y C10030S G12331R C14408T T15624W T17995W C17999Y G18368K T18784K G20213R A22931R C22938M A23403G G23724S G24497K G26620K G26730K C27812T T28061Y T28224Y C28657G GGG28881AAC G29825S CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT451823 EPI_ISL_436112,2020-04-09,SARS-CoV-2/human/AUS/VIC1245/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTG1- C241T C1707T C3037T C14408T C15324T A23403G T25623W AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451824 EPI_ISL_436113,2020-04-09,SARS-CoV-2/human/AUS/VIC1247/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C22968M A23403G GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451825 EPI_ISL_436114,2020-04-09,SARS-CoV-2/human/AUS/VIC1248/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGAT1- C241T C3037T C14408T C15324T A23403G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451826 EPI_ISL_436115,2020-04-10,SARS-CoV-2/human/AUS/VIC1250/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T G1658T C3037T G8102T C14408T A23403G GGG28881AAC T29035Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451827 EPI_ISL_436116,2020-04-10,SARS-CoV-2/human/AUS/VIC1251/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTT1- C884Y C995Y G1607S TC1930WM G2150K C4540T C4655Y G5918K T6923Y G7533R A7626R C8092M A9175M G9446S T9477A G10072R C14805T T15255Y G17320K G17632R C18962Y C22062Y G23486K G24584R A25393R G25979T C26447Y T28144C C28311T C28657T G28793K C28863T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451828 EPI_ISL_436117,2020-04-10,SARS-CoV-2/human/AUS/VIC1252/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T490A C3177T T3727Y G9136K C12459Y G13091K G14944R G15392K C15960T A17631R T18736C G19406R G19684T A20203W A23147R C24034T G27561K C27635T G28077C T28144C A29700G G29711R TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT451829 EPI_ISL_436118,2020-04-11,SARS-CoV-2/human/AUS/VIC1253/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T692Y T1333Y G1738R G2164K T2634Y C3037T C3101M T3295Y G3621R A4017R G4136K A4666M AC5283RY T5588Y T5600Y A6097R G6680S C6726Y A6912W T7623K A7626R C8140Y C8435Y C8994Y T9192Y C9214T A9926W C10931Y T10944Y C11202Y T11214W C12076Y A12097W C12138Y A12687W C13164Y C13170Y T13273Y C13316Y G13713K T13781Y G13870R T14059Y A14213R C14408T A14751W C15050Y A15239R T16007Y T16337Y A16522R G17096K C17410Y T17618Y C17676T T18035Y T18936Y C19274Y C19438Y T19544Y C20656Y C20792Y A21081R C21903Y A21936M T21961Y A23403G T23849Y C23934Y C24106Y C24797Y G24883R G25534K T25812Y T27210Y C27812T A28415W C28425Y GGG28881RRS C29416Y A29712R C29750Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451830 EPI_ISL_436119,2020-04-11,SARS-CoV-2/human/AUS/VIC1255/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C1076T G1397A G11083T T13857C G24933T C25469T C27964T T28688C G29742T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451831 EPI_ISL_436120,2020-04-11,SARS-CoV-2/human/AUS/VIC1256/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T G2164T C3037T C14408T A23403G G25563T G26959A C27964T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451832 EPI_ISL_436121,2020-04-11,SARS-CoV-2/human/AUS/VIC1257/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C1076T G1397A A2861R A8694R G11083T G16189R C16658Y G17686K T26121Y C27964T T28688C G29742T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451833 EPI_ISL_436122,2020-04-11,SARS-CoV-2/human/AUS/VIC1258/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T T3972Y C14408T G22026S C22181Y A23403G G24215S G25563T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451834 EPI_ISL_436123,2020-04-11,SARS-CoV-2/human/AUS/VIC1260/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C228T G1397A C2675Y A5829R G9479T A9514G T19369C C21114T G26720C T28688C T28835C G29133K G29742T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451835 EPI_ISL_436124,2020-04-12,SARS-CoV-2/human/AUS/VIC1265/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C4406Y C4540T A7626R C8782T T9477A A14201W G14449K T14626Y C14805T A21137R G21956R A21993W C24833S G25979T T28144C C28311T C28657T C28863T C29803Y GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451836 EPI_ISL_436125,2020-04-12,SARS-CoV-2/human/AUS/VIC1266/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T T2489Y C3037T T7438C C14408T T15166C A23403G A26864G C29034Y C29353T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451837 EPI_ISL_436126,2020-04-12,SARS-CoV-2/human/AUS/VIC1267/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T T847Y C1059T G2164T C3037T C14408T A23403G G25563T G26959A C27964T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT451838 EPI_ISL_436128,2020-04-13,SARS-CoV-2/human/AUS/VIC1270/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G996R C1025Y C1059T C3037T T4555Y A7626R A12791W C14408T G15265K C16646Y T16780Y A23403G G25563T T25732Y C26522Y C26534Y G26959A C27964T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451839 EPI_ISL_436129,2020-04-13,SARS-CoV-2/human/AUS/VIC1271/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C4540T C8782T T9477A C14805T G25979T T28144C C28311T C28657T C28863T GTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29841- >MT451840 EPI_ISL_436130,2020-04-13,SARS-CoV-2/human/AUS/VIC1272/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T G347S C999Y G1730R T2080W C3037T G8102T C8947Y G10465R G10467K T11076Y C11139Y C14408T C15419Y G16855S C19554Y AG19626WR G21641K G22676K A23403G C23609Y C26768Y C28651Y GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT451841 EPI_ISL_436131,2020-04-14,SARS-CoV-2/human/AUS/VIC1273/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T G22017K A23403G G25563T C29200M A29267R A29301R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451842 EPI_ISL_436132,2020-04-14,SARS-CoV-2/human/AUS/VIC1274/2020,Australia / Victoria ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T G3839K C6151T C14408T C21595Y A23403G G25563T G26959A C27964T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT451874 EPI_ISL_437438,2020-04-24,SARS-CoV-2/human/IND/GBRC10/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- G1820A C6310A C6312A T6702C G11083T C13730T C19524T C23929T G26727T C28311T AC28549CA GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451875 EPI_ISL_437439,2020-04-23,SARS-CoV-2/human/IND/GBRC11/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C8782T T11731C T27740C T28144C G28878A C29218T G29742A GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451876 EPI_ISL_437440,2020-04-26,SARS-CoV-2/human/IND/GBRC12/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T GTT669- C3037T G11083T G14290T C14408T G18186T C18877T C21364T A23403G A25104G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451877 EPI_ISL_437441,2020-04-26,SARS-CoV-2/human/IND/GBRC13/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- A2705G C5547T C8782T T9660C G14500T G22468T G27506T T28144C G28878A G29742A GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451878 EPI_ISL_437442,2020-04-27,SARS-CoV-2/human/IND/GBRC14/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- T3843G C6312A G11083T C11200T C13730T C16017T C23929T C28311T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451879 EPI_ISL_437443,2020-04-27,SARS-CoV-2/human/IND/GBRC15/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- TC8716GA C8782T G20176T G22468T T28144C G28878A G29742A GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451880 EPI_ISL_437444,2020-04-26,SARS-CoV-2/human/IND/GBRC16/2020,India / Gujarat / Surat ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C6312A G11083T C11200T C13730T C16017T C23929T G25354T C28311T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451881 EPI_ISL_437445,2020-04-26,SARS-CoV-2/human/IND/GBRC17a/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C2836T C3037T G14274C C14408T C18877T C22444T A23403G G23678T G25290T G25563T G25855T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451882 EPI_ISL_437446,2020-04-26,SARS-CoV-2/human/IND/GBRC17b/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C2836T C3037T G14274C C14408T C18877T C22444T A23403G G25290T G25563T G25855T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451883 EPI_ISL_437447,2020-04-26,SARS-CoV-2/human/IND/GBRC18/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T A14673G A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451884 EPI_ISL_437448,2020-04-26,SARS-CoV-2/human/IND/GBRC19/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T A14673G A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451885 EPI_ISL_437449,2020-04-26,SARS-CoV-2/human/IND/GBRC20/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T AA10478CT C14408T C18877T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451886 EPI_ISL_437450,2020-04-26,SARS-CoV-2/human/IND/GBRC21/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T C14408T A23403G G23593T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451887 EPI_ISL_437451,2020-04-26,SARS-CoV-2/human/IND/GBRC22/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T G2309T C3037T C14408T C16575T T17589A A23403G G28979T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451888 EPI_ISL_437452,2020-04-26,SARS-CoV-2/human/IND/GBRC23/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1519T C2836T C3037T A5821G A5825G A6183G C14408T C18877T G21724T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451889 EPI_ISL_437453,2020-04-26,SARS-CoV-2/human/IND/GBRC24a/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- A6081G C6312A T6989C C13730T T21628G C23929T C28311T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT451890 EPI_ISL_437454,2020-04-26,SARS-CoV-2/human/IND/GBRC24b/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C3037T A6081G C6312A T6989C C13730T A13859G C14408T G16078A C18877T T21628G C22444T G23311T C23929T G25563T C25904T C28311T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT452574 ,2020-03-12,SAR-CoV-2/human/USA/NY-QDX-00000001/2020,United States / NY ATTAA1- C241T C1059T C3037T C14408T A23403G G25563T >MT452575 ,2020-03-13,SAR-CoV-2/human/USA/WA-QDX-00000002/2020,United States / WA G2840A G5572T C8782T C17747T A17858G C18060T A26045G T28144C >MT452576 ,2020-03-13,SAR-CoV-2/human/USA/CA-QDX-00000003/2020,United States / CA G4285T C8782T C17747T A17858G C18060T T28144C C29642T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT457402 EPI_ISL_437626,2020-03-24,SARS-CoV-2/human/IND/GMC-KP1125/2020,India / Telengana / Hyderabad ATTAAAGGTTT1- C241T C3037T C14408T C18877T T19538Y A23403G G25563T G29868R C29870A >MT457403 ,2020-03-25,SARS-CoV-2/human/IND/GMC-RR1191/2020,India / Hyderabad ATTAAAGGTTT1- C6312A G11083T C13730T C23929T C28311T C29733Y G29868R C29870A >MT459832 EPI_ISL_447832,2020-03-24,SARS-CoV-2/human/GRC/34_36284/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459833 EPI_ISL_437874,2020-03-20,SARS-CoV-2/human/GRC/43_35679/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C14786T T18126C A23403G T26359A GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459834 EPI_ISL_447833,2020-03-23,SARS-CoV-2/human/GRC/50_36277/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459835 EPI_ISL_447834,2020-03-23,SARS-CoV-2/human/GRC/55_36015/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459836 EPI_ISL_437875,2020-03-14,SARS-CoV-2/human/GRC/152_33705/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T G20002T A23403G T23927G C28657T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459837 ,2020-03-29,SARS-CoV-2/human/GRC/35_36913/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G11083T C14805T C20402T G24926T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459838 ,2020-03-28,SARS-CoV-2/human/GRC/36_36859/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A22124G A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459839 ,2020-03-20,SARS-CoV-2/human/GRC/37_35684/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459840 ,2020-03-23,SARS-CoV-2/human/GRC/38_36178/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T G5230T C14408T A20268G A23403G G28975T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459841 ,2020-03-29,SARS-CoV-2/human/GRC/39_36914/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T A2590G C3037T C14408T C18264T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459842 ,2020-03-23,SARS-CoV-2/human/GRC/44_36073/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459843 ,2020-03-23,SARS-CoV-2/human/GRC/46_36230/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459844 ,2020-03-23,SARS-CoV-2/human/GRC/47_36060/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G11083T C14805T G18907T C20402T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459845 ,2020-03-22,SARS-CoV-2/human/GRC/48_35910/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C8782T C9430T T9477A C14805T A22151G G25979T T28144C C28657T C28863T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459846 ,2020-03-26,SARS-CoV-2/human/GRC/51_36518/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C313T C3037T C14408T A23403G C24863T G25135T C27673T G28086T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459847 ,2020-04-04,SARS-CoV-2/human/GRC/53_38017/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- GTTATG515- A2480G C2558T C9491T G11083T C14805T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459848 EPI_ISL_447835,2020-03-31,SARS-CoV-2/human/GRC/54_37163/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459849 ,2020-03-09,SARS-CoV-2/human/GRC/133_31929/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C6312G C14408T C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459850 ,2020-03-10,SARS-CoV-2/human/GRC/134_32124/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- G11083T C14805T G26144T G28842T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459851 ,2020-03-10,SARS-CoV-2/human/GRC/135_32174/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459852 ,2020-03-11,SARS-CoV-2/human/GRC/136_32338/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G G24236T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459853 ,2020-03-11,SARS-CoV-2/human/GRC/137_32340/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T A6646G C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459854 ,2020-03-11,SARS-CoV-2/human/GRC/138_32343/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459855 ,2020-03-12,SARS-CoV-2/human/GRC/139_32716/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459856 ,2020-03-12,SARS-CoV-2/human/GRC/140_32855/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T G1681A C3037T T8719C C14408T G14734T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459857 ,2020-03-12,SARS-CoV-2/human/GRC/141_32983/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C16073T A23403G GGG28881AAC C28887T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459858 ,2020-03-14,SARS-CoV-2/human/GRC/142_33859/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459859 ,2020-03-16,SARS-CoV-2/human/GRC/143_34652/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459860 ,2020-03-16,SARS-CoV-2/human/GRC/144_34723/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- G11083T C14805T T17247C G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459861 EPI_ISL_447836,2020-03-16,SARS-CoV-2/human/GRC/145_34726/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C8782T C12754T G21255T G25906T C26088T T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459862 ,2020-03-19,SARS-CoV-2/human/GRC/146_35473/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- GTTATG515- A2480G C2558T G11083T C14805T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459863 ,2020-03-09,SARS-CoV-2/human/GRC/148_31943/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459864 EPI_ISL_447635,2020-03-11,SARS-CoV-2/human/GRC/149_32357/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- G1440A G2891A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459865 ,2020-03-12,SARS-CoV-2/human/GRC/150_32764/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C2508T G9190T G11083T C14805T G15919T T17247C G26144T G26172A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459866 ,2020-03-13,SARS-CoV-2/human/GRC/151_33690/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459867 ,2020-03-20,SARS-CoV-2/human/GRC/154_35632/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC C28887T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459868 ,2020-03-19,SARS-CoV-2/human/GRC/155_35480/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459869 ,2020-03-16,SARS-CoV-2/human/GRC/156_34721/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459870 EPI_ISL_437876,2020-03-12,SARS-CoV-2/human/GRC/202_32984/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC C28887T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459871 EPI_ISL_447636,2020-03-12,SARS-CoV-2/human/GRC/203_33026/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459872 EPI_ISL_437877,2020-03-12,SARS-CoV-2/human/GRC/204_33112/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C2434T C3037T C14408T A23403G C25350T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459873 EPI_ISL_447637,2020-03-13,SARS-CoV-2/human/GRC/205_33490/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459874 EPI_ISL_447638,2020-03-13,SARS-CoV-2/human/GRC/206_33492/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459875 EPI_ISL_447639,2020-03-13,SARS-CoV-2/human/GRC/207_33548/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459876 EPI_ISL_437878,2020-03-14,SARS-CoV-2/human/GRC/208_33922/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC C28887T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459877 EPI_ISL_437879,2020-03-14,SARS-CoV-2/human/GRC/209_33926/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C4002T G10097A C13536T C14408T A23403G C23731T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459878 EPI_ISL_437880,2020-03-14,SARS-CoV-2/human/GRC/210_33942/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C9039T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459879 EPI_ISL_447640,2020-03-14,SARS-CoV-2/human/GRC/211_34005/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459880 EPI_ISL_437881,2020-03-14,SARS-CoV-2/human/GRC/212_34023/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459881 EPI_ISL_437882,2020-03-14,SARS-CoV-2/human/GRC/213_34051/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- ATG1605- A28210G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459882 EPI_ISL_437883,2020-03-15,SARS-CoV-2/human/GRC/214_34505/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- ATG1605- C17898T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459883 EPI_ISL_437884,2020-03-16,SARS-CoV-2/human/GRC/215_34644/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G11083T C14267T C14805T A16095G G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459884 EPI_ISL_447641,2020-03-16,SARS-CoV-2/human/GRC/216_34732/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459885 EPI_ISL_437885,2020-03-17,SARS-CoV-2/human/GRC/217_34885/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T A4282G C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459886 EPI_ISL_437886,2020-03-17,SARS-CoV-2/human/GRC/218_35009/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T T21357G A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459887 EPI_ISL_447642,2020-03-18,SARS-CoV-2/human/GRC/219_35198/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459888 EPI_ISL_437887,2020-03-18,SARS-CoV-2/human/GRC/220_35357/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A20268G A23403G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459889 EPI_ISL_437888,2020-03-12,SARS-CoV-2/human/GRC/221_33038/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G6961T G11083T C14805T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459890 EPI_ISL_447643,2020-03-14,SARS-CoV-2/human/GRC/222_33921/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459891 EPI_ISL_437889,2020-03-17,SARS-CoV-2/human/GRC/223_34904/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C19862T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459892 EPI_ISL_437890,2020-03-18,SARS-CoV-2/human/GRC/224_35200/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459893 EPI_ISL_437891,2020-03-18,SARS-CoV-2/human/GRC/225_35203/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T C3037T C4780T G9136A G11083T C14408T C21781T A23403G G25563T C26801T C29415T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459894 EPI_ISL_437892,2020-03-19,SARS-CoV-2/human/GRC/226_35576/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G11083T C14267T C14805T A16095G G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459895 EPI_ISL_447644,2020-03-22,SARS-CoV-2/human/GRC/227_35969/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459896 EPI_ISL_437893,2020-03-29,SARS-CoV-2/human/GRC/33_36910/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T G20125A G20128A A22739C A23403G C27263T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459897 EPI_ISL_437894,2020-03-05,SARS-CoV-2/human/GRC/234_31670/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459898 ,2020-03-07,SARS-CoV-2/human/GRC/235_31783/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459899 EPI_ISL_437895,2020-03-07,SARS-CoV-2/human/GRC/236_31815/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C2508T G9190T G11083T C12213T C14805T G15919T T17247C G26144T G26172A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459900 EPI_ISL_437896,2020-03-08,SARS-CoV-2/human/GRC/237_31890/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T C18877T A23403G A24367G G25563T G25855T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459901 EPI_ISL_447645,2020-03-09,SARS-CoV-2/human/GRC/238_31927/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459902 EPI_ISL_447646,2020-03-10,SARS-CoV-2/human/GRC/239_32178/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459903 EPI_ISL_437897,2020-03-23,SARS-CoV-2/human/GRC/40_36244/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G A26114T GGG28881AAC C29364G C29754T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459904 EPI_ISL_437898,2020-03-28,SARS-CoV-2/human/GRC/41_36861/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T G10870T C14408T C14786T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459905 EPI_ISL_437899,2020-03-23,SARS-CoV-2/human/GRC/42_36236/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A187G C241T C3037T C14408T A23403G C25916T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459906 ,2020-03-18,SARS-CoV-2/human/GRC/45_35378/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459907 EPI_ISL_447647,2020-03-10,SARS-CoV-2/human/GRC/247_32207/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459908 EPI_ISL_437900,2020-03-10,SARS-CoV-2/human/GRC/248_32261/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C6312G C14408T A15593G C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459909 EPI_ISL_447648,2020-03-10,SARS-CoV-2/human/GRC/250_32267/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459910 EPI_ISL_437901,2020-03-11,SARS-CoV-2/human/GRC/251_32400/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T G2229A C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459911 EPI_ISL_437902,2020-03-14,SARS-CoV-2/human/GRC/153_33892/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G G23868T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459912 EPI_ISL_447649,2020-03-11,SARS-CoV-2/human/GRC/254_32422/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459913 EPI_ISL_447650,2020-03-11,SARS-CoV-2/human/GRC/255_32525/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459914 EPI_ISL_447651,2020-03-09,SARS-CoV-2/human/GRC/259_31928/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459915 EPI_ISL_437903,2020-03-10,SARS-CoV-2/human/GRC/243_32202/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C10202T C14408T A23403G C25350T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459916 EPI_ISL_437904,2020-03-10,SARS-CoV-2/human/GRC/244_32204/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G C25350T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459917 EPI_ISL_437905,2020-03-10,SARS-CoV-2/human/GRC/246_32206/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C5183T C14408T C18877T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459918 EPI_ISL_437906,2020-03-10,SARS-CoV-2/human/GRC/260_32216/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T A3829G G11083T C14805T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459919 EPI_ISL_437907,2020-03-10,SARS-CoV-2/human/GRC/261_32221/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C8782T C18115T A21562T C26088T C26606T T28144C ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459920 EPI_ISL_447652,2020-03-11,SARS-CoV-2/human/GRC/262_32443/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459921 EPI_ISL_447653,2020-03-11,SARS-CoV-2/human/GRC/263_32477/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T C14408T A23403G GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459922 EPI_ISL_437908,2020-03-11,SARS-CoV-2/human/GRC/264_32497/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- C241T C3037T A23403G C28826T GGG28881AAC ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459923 EPI_ISL_437909,2020-03-27,SARS-CoV-2/human/GRC/49_36716/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A5838G A8115G G11083T C14805T T17247C A17961G G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459924 EPI_ISL_437910,2020-04-01,SARS-CoV-2/human/GRC/52_37266/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A2480G C2558T G11083T C14805T C20402T G26144T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459925 EPI_ISL_437911,2020-03-31,SARS-CoV-2/human/GRC/56_37161/2020,Greece / Athens ATTAAAGGTTTATACCTTCCCAGGT1- A187G C241T C3037T C14408T A23403G ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT459928 EPI_ISL_445088,2020-03-26,SARS-CoV-2/human/IRN/KHGRC-3-2178/2020,Iran ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACG1- G1397A A3481C T8707C G20887A C21627T C22735T T28688C C28830T G29742T TCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29834- >MT459979 EPI_ISL_445087,2020-04-04,SARS-CoV-2/human/SRB/Novi Pazar-363/2020,Serbia / Novi Pazar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G10265A C14408T A15972G C19718T A23403G T28759C GGG28881AAC CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT459985 ,2020-03-26,SARS-CoV-2/human/GUM/GU-NHG-01/2020,United States / Guam C6312A T8855C C10582T G11083T C12933T C13730T C23929T C28311T >MT459986 ,2020-03-24,SARS-CoV-2/human/GUM/GU-NHG-02/2020,United States / Guam C6312A G11083T C13730T C23929T C28311T >MT459987 ,2020-03-20,SARS-CoV-2/human/GUM/GU-NHG-03/2020,United States / Guam ATTAAAGGTTTAT1- C6312A G11083T C13730T C23929T C28311T G29162T >MT459988 ,2020-03-27,SARS-CoV-2/human/USA/SC-NHRC-01/2020,United States / SC ATTAAAGGTTTAT1- C241T C1059T C3037T C14408T A23403G G25563T C29095T C29668T >MT459989 ,2020-03-27,SARS-CoV-2/human/USA/SC-NHRC-02/2020,United States / SC ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25563T C29095T >MT459990 ,2020-03-26,SARS-CoV-2/human/USA/SC-NHRC-03/2020,United States / SC ATTAAAGGTTTAT1- C241T C1059T C3037T C14408T A23403G G25563T C29095T >MT460089 ,2020-05-01,SARS-CoV-2/human/USA/CA-CZB-1089/2020,United States / CA ATTAAAGGTTT1- C6363T C9979T T24628C C25692T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460090 ,2020-05-01,SARS-CoV-2/human/USA/CA-CZB-1090/2020,United States / CA ATTAAAG1- G491A A14940G >MT460091 ,2020-05-01,SARS-CoV-2/human/USA/CA-CZB-1091/2020,United States / CA ATTAAAGGTTTATACC1- A14940G C15024T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460092 ,2020-05-01,SARS-CoV-2/human/USA/CA-CZB-1092/2020,United States / CA ATTAAAGGTTTATACCT1- G491A A14940G T15771K AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460113 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1093/2020,United States / CA ATTAAAGGTTTA1- C8782T C17747T A17858G C18060T T28144C >MT460114 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1094/2020,United States / CA ATTAAAGGTTTATA1- C241T C3037T C5467T C8389T G8785A C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460115 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1095/2020,United States / CA ATTAAAGGTTTATACC1- C241T C3037T C5467T C8389T G8785A C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460116 ,2020-04-29,SARS-CoV-2/human/USA/CA-CZB-1096/2020,United States / CA A1- C8782T C17747T A17858G C18060T A18600T C25603T T28144C >MT460117 ,2020-04-26,SARS-CoV-2/human/USA/CA-CZB-1097/2020,United States / CA ATTAAAGGTTT1- C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460118 ,2020-04-26,SARS-CoV-2/human/USA/CA-CZB-1098/2020,United States / CA ATTAAAGGTTTATAC1- G17079T G25177T G25775T T27843C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460119 ,2020-04-28,SARS-CoV-2/human/USA/CA-CZB-1099/2020,United States / CA ATT1- C241T C1059T G2764T C3037T C4069T C14408T C19011T A23403G G25563T >MT460120 ,2020-04-28,SARS-CoV-2/human/USA/CA-CZB-1100/2020,United States / CA ATTAAAG1- C1102T C8782T T16950C C17747T A17858G C18060T C27710T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460121 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1101/2020,United States / CA ATTAAAGGTTTATACCTT1- C241T C3037T C5467T C8389T G8785A C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460122 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1102/2020,United States / CA ATTAAAGGTTTATAC1- C241T C3037T A5094R C5467T C8389T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460123 ,2020-04-27,SARS-CoV-2/human/USA/CA-CZB-1103/2020,United States / CA ATTAAAGGTTTATACC1- C241T C5467T C8389T G8785A C14408T A23403G G25563T C26684T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460124 ,2020-04-28,SARS-CoV-2/human/USA/CA-CZB-1104/2020,United States / CA ATTAAAGGTTT1- A4269G C8782T C17747T A17858G C18060T TTTGGGTGTTTA21982- T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460125 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1105/2020,United States / CA ATTAAAGGTTTATACC1- C241T C3037T A12077G C14408T C23220T A23403G GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460126 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1106/2020,United States / CA ATTAAAGGTTTATA1- C241T C3037T T13542K C14408T A23403G T23443W GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460127 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1107/2020,United States / CA ATTAAA1- C8782T C10776T C17747T A17858G C18060T C18452T T20315A T28144C G29560R AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460128 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1108/2020,United States / CA ATT1- C241T C3037T C14408T C23220T A23403G GGG28881AAC >MT460129 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1109/2020,United States / CA ATTAAAGGTTTA1- C241T C3037T C5467T C8389T G8785A C14408T A23403G C25066Y G25563T C26684T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460130 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1110/2020,United States / CA ATTA1- G17079T C18060T G25177T G25775T T27843C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460131 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1111/2020,United States / CA ATTAAAGGTTTATACC1- C106T A1643G C8782T C17747T A17858G C18060T A19416R A24694T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460132 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1112/2020,United States / CA ATTAA1- C241T C1059T G2764T C3037T C4069T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460133 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1113/2020,United States / CA C241T C1059T C3037T C11916T C14408T C18998T A23403G G25563T G25947C G29540A >MT460134 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1114/2020,United States / CA ATTAAAGGTTTATACCTTCCC1- C8782T T14556K G14563R C17747T A17858G C18060T C27920G T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT460135 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1115/2020,United States / CA ATTAAAGGTTTA1- C241T C1059T G2764T C3037T C4897T C14408T A23403G G25563T C27294T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460136 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1116/2020,United States / CA ATTA1- C241T C1059T G2764T C3037T C4897T C14408T A23403G G25563T C27294T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT460137 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1117/2020,United States / CA ATTAAAGGTTTATACC1- C241T C3037T C14408T C15853S A23403G C24863T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460138 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1118/2020,United States / CA ATTAAAGGTTTA1- C241T C3037T T13572C C14408T A23403G C24863T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460139 ,2020-04-30,SARS-CoV-2/human/USA/CA-CZB-1119/2020,United States / CA ATTAAAGGTTTAT1- C241T C3037T C5467T C8389T G8785A C14408T A23403G C25066T G25563T C26684T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT460140 ,2020-04-29,SARS-CoV-2/human/USA/CA-CZB-1120/2020,United States / CA C241T C3037T C14408T A23403G C24863T GGG28881AAC >MT461603 EPI_ISL_437803,2020-03-29,SARS-CoV-2/human/USA/UNKNOWN-UW-3982/2020,United States ATTAAAG1- TA11GT TC18GG C28T C241T C1059T C3037T C14408T G17808T A23403G G25563T G29553A -29904AAAAAAAAAAAAAAAA >MT461604 EPI_ISL_437804,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4009/2020,United States / Washington ATTAAAG1- TA11GT TCCC18GGGA C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAA >MT461605 EPI_ISL_437805,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4014/2020,United States / Washington ATTA1-GGG A12T TCCC18GGGA C5170T C8782T C16468T C17004T T17673C C17747T A17858G C18060T T28144C >MT461606 EPI_ISL_437806,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4015/2020,United States / Washington ATTAAAGGTTTATACCTTCCC1-------------------GA C241T C3037T C14408T A23403G T27299C GGG28881AAC T29148C -29904AAAAAAAAAAAAAA >MT461607 EPI_ISL_437807,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4021/2020,United States / Washington A1C TA3GG TA11GT TCC18GGG C241T C1059T C3037T C14408T G16912T A23403G C23551T G25563T G29553A -29904AAAAAAAAAAAAAAAAAA >MT461608 EPI_ISL_437808,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4024/2020,United States / Washington ATTAAAGG1- TA11GT C19V C241T C1059T C3037T C14408T A23403G G25563T G29553A >MT461609 EPI_ISL_437809,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4026/2020,United States / Washington A1C TAA3GGH TA11GT TC18GG C28T C8782T C9166T A14882G C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAAAAAA >MT461610 EPI_ISL_437810,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4032/2020,United States / Washington ATTA1--GG T10A C8782T C17747T A17858G C18060T T28144C G28514T >MT461611 EPI_ISL_437811,2020-03-29,SARS-CoV-2/human/USA/WA-UW-4041/2020,United States / Washington ATTA1-GGG TA11GT T18G C241T C1059T C3037T C14408T A23403G G25563T >MT461612 EPI_ISL_437812,2020-03-28,SARS-CoV-2/human/USA/WA-UW-4046/2020,United States / Washington ATTAAAG1- TA11GT TCCC18GGGA C8782T C13511T G17686T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAAAA >MT461613 EPI_ISL_437813,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4051/2020,United States / Washington ATTAAAG1- TA11GT TC18GG C222T A3558G A6693G C8782T C17747T A17858G C18060T T28144C G29868A C29870A >MT461614 EPI_ISL_437814,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4058/2020,United States / Washington ATTAAAGGTTTATACC1- C241T C1059T C3037T C7728A C14408T C20703T A23403G G25563T G29553A G29868A C29870A -29904AAAAAAAAAAAAAAAA >MT461615 EPI_ISL_437815,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4061/2020,United States / Washington A1C TA3GG TA11GT TCC18GGG C8782T C17747T A17858G C18060T T28144C >MT461616 EPI_ISL_437816,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4065/2020,United States / Washington ATTAAAGGTTTATAC1- TT7825KK C7844A C8782T C17747T A17858G C18060T T28144C >MT461617 EPI_ISL_437817,2020-04-01,SARS-CoV-2/human/USA/WA-UW-4067/2020,United States / Washington ATTAAAGG1- TA11GT TCCC18GGGA C8782T A10844G C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAA >MT461618 EPI_ISL_437818,2020-04-01,SARS-CoV-2/human/USA/UNKNOWN-UW-4089/2020,United States ATTA1--GG TA11GT TCCC18GGGA C147T C241T C1059T C3037T C6040T C14408T A23403G G25563T -29904AAAAAAAAAAAAAAAA >MT461619 EPI_ISL_437819,2020-04-01,SARS-CoV-2/human/USA/UNKNOWN-UW-4097/2020,United States A1G AAA4GTT TA11GT C241T C1059T C3037T C14408T G20014T A23403G G25563T G29553A >MT461620 EPI_ISL_437820,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4114/2020,United States / Washington ATTAAAGGT1- A12T TCCC18GGGM C241T C1059T C3037T C10989T C14408T A21417T C21575T A23403G G25563T G29864D AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT461621 EPI_ISL_437821,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4210/2020,United States / Washington ATTA1CGGG T10G T13A C241T C1059T C3037T C14408T A23403G G25563T >MT461622 EPI_ISL_437822,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4221/2020,United States / Washington ATTAAAGGTTTA1- T18G CC20BH C28Y C8782T C17747T A17858G C18060T T28144C C29870A -29904AAAAAAAAAAAAAA >MT461623 EPI_ISL_437824,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4225/2020,United States / Washington A12T TC18GV C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAAAA >MT461624 EPI_ISL_437825,2020-03-30,SARS-CoV-2/human/USA/CT-UW-4237/2020,United States / Connecticut ATTAAAGGTTTA1- C19V C241T C1059T C3037T C14408T A23403G G25563T TG29867AA C29870A >MT461625 EPI_ISL_437826,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4254/2020,United States / Idaho ATTAAAGGT1- TA11GT TCCC18GGGA C241T T833C C1059T C3037T C6195T C14408T C15720T G21641T A23403G G25563T C27964T -29904AAAAAAAAAAAA >MT461626 EPI_ISL_437827,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4270/2020,United States / Washington ATTAAA1----TT A12D TCCC18GGGA A1079C G1397A T7225C C9319T G11083T C19862T T27384C T28688C G29742T >MT461627 EPI_ISL_443184,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4296/2020,United States / Washington ATTAAA1- T10A T13A A31T AAC34TTT C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A G29706T G29862A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT461628 EPI_ISL_437828,2020-03-30,SARS-CoV-2/human/USA/ID-UW-4308/2020,United States / Idaho ATTAAA1-GGGTT TA11GT TCC18GGG C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T -29904AAAAAAAAAAAAAAAAAA >MT461629 EPI_ISL_437829,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4317/2020,United States / Washington ATTAAA1- A12T C19V C8782T C17747T A17858G C18060T T28144C -29904AAAAAAAAAAAAAAAA >MT461630 EPI_ISL_443186,2020-03-31,SARS-CoV-2/human/USA/WA-UW-4414/2020,United States / Washington A1- A4T AAC34TTT C241T C1059T C3037T G5194T G11807A C14408T A23403G A23440G G25563T G29862A G29864A TG29867AA C29870A >MT461631 EPI_ISL_437830,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6446/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTT1- C241T T833C C1059T C2523T C3037T C14408T A23403G G25563T C27964T C29625T G29868A C29870A A29903- >MT461632 EPI_ISL_437831,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6448/2020,United States / Idaho ATTAAAGGTTTA1- AC35WT C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T G28027C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT461633 EPI_ISL_437832,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6455/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAG1- C823T T833C C1059T C3037T C14408T A14856G C22088T A23403G G25563T C27964T TG29867AA C29870A >MT461634 EPI_ISL_437833,2020-04-03,SARS-CoV-2/human/USA/ID-UW-6457/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T >MT461635 EPI_ISL_437835,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6466/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAG1- A31T C36T C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T G29543T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT461636 EPI_ISL_437836,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6467/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCT1- C241T T833C C1059T C3037T C7029T C14408T A23403G G25563T C27964T AGTGTAC29756- G29864R TG29867AA C29870A >MT461637 EPI_ISL_437837,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6472/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTG1- C241T T833C C1059T C3037T C10965T C14408T A23403G G25563T C27964T A29903- >MT461638 EPI_ISL_437838,2020-04-02,SARS-CoV-2/human/USA/ID-UW-6473/2020,United States / Idaho ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T TG29867AA C29870A >MT461639 EPI_ISL_437839,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6478/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACA1- A31T AAC34TTT C241T C1059T C3037T C14408T A23403G G25563T G29553A -29904AAAAAAAAAAAA >MT461640 EPI_ISL_437840,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6480/2020,United States / Washington AT1- C36T C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT461641 EPI_ISL_437841,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6481/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C4158T A5011C G14126A C14408T A23403G G25563T >MT461642 EPI_ISL_437842,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6483/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAA1- C241T C1059T C3037T C14408T A23403G G25563T G29553A G29864R TG29867AA C29870A -29904AAAAAAAAAAAAAAAA >MT461643 EPI_ISL_437843,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6484/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C36T T334C C8782T A13198G C17747T A17858G C18060T T27384C T28144C GG29861AA G29864A TG29867AA C29870A >MT461644 EPI_ISL_437844,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6485/2020,United States / Washington ATTAAAGGTT1- AACC30CTTT C36T C241T C1059T C3037T C14408T G16912T A23403G G25563T G29553A GG29861AA G29864A TG29867AA C29870A >MT461645 EPI_ISL_437845,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6486/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G24075A G25563T C27476T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT461646 EPI_ISL_437848,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6491/2020,United States / Washington AT1- A4H AAC34TTT C241T C1059T C3037T C12880T C14408T A23403G G25563T T25724C G29553A G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT461647 EPI_ISL_437850,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6497/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAG1- C36T C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A G29868V C29870A >MT461648 EPI_ISL_437851,2020-04-03,SARS-CoV-2/human/USA/WA-UW-6501/2020,United States / Washington AT1-A A4T A31T C36T C241T C1059T C3037T C12880T C14408T A23403G G25563T G29553A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT461649 EPI_ISL_437852,2020-04-05,SARS-CoV-2/human/USA/UNKNOWN-UW-6504/2020,United States ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C36T C241T C313T C3037T C3096T C14408T C20320T A23403G C25904T GGG28881AAC CAGTG29762- CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT461650 EPI_ISL_437853,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6507/2020,United States / Washington AT1- A4T A31T C36T C241T C1059T C3037T C14408T A23403G G25563T C27804T G29553A -29904AAAAAAAAAAAAAA >MT461651 EPI_ISL_437854,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6514/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T G13459T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT461652 EPI_ISL_437855,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6520/2020,United States / Washington ATTAAAG1- AAC34TTT C241T C1059T C3037T C6040T C14408T C14599T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAA29877- >MT461653 EPI_ISL_437856,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6526/2020,United States / Washington ATTAAA1- AAC34TTT C241T C3037T C14408T A22215T A23403G AA29902- >MT461654 EPI_ISL_437857,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6527/2020,United States / Washington ATTAAAGGTTTAT1- A31T AAC34TTT A2274C C8782T C17747T A17858G C18060T T18345C T23010C T23427C C25231T T28144C -29904AAAAAAAAAAA >MT461655 EPI_ISL_437858,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6528/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACT1- C3037T C14408T A23403G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT461656 EPI_ISL_437859,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6535/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCT1- C241T C1059T C3037T C14408T A23403G G25563T CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT461657 EPI_ISL_437860,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6546/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T G4975T C14408T A23403G G25523T G25563T T27869C -29904AAAAAAA >MT461658 EPI_ISL_437861,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6547/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AAC34TTT C5717T C8782T C17326T C17747T A17858G A17884G C18060T G19645T T28144C C29686A G29711T GG29861AA G29864A TG29867AA C29870A -29904AAAAAAAAAAAAAAAAAA >MT461659 EPI_ISL_437862,2020-04-04,SARS-CoV-2/human/USA/WA-UW-6548/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATG1- C241T C1059T C3037T A12148T C13536T C14408T A23403G G25563T G29553A AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT461660 EPI_ISL_437863,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6559/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- ACC35TTH C241T G680A C1059T C3037T C14408T G16912T A23403G G25563T G29553A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT461661 EPI_ISL_437864,2020-04-05,SARS-CoV-2/human/USA/WA-UW-6562/2020,United States / Washington ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTGGTT1- G3231T C8782T A12044G C17747T A17858G C18060T T28144C AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT461662 EPI_ISL_437865,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6564/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACA1- C241T C619T G626A C1059T C3037T C14408T A14912G A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT461663 EPI_ISL_437866,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6565/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAA1- AAC34WWT C241T C3037T C14408T A23403G G28851T GGG28881AAC AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT461664 EPI_ISL_437868,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6569/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA G105T C241T C3037T C14408T C18877T G19962A A23403G A24123G G25563T G28090C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT461665 EPI_ISL_437869,2020-04-03,SARS-CoV-2/human/USA/CT-UW-6571/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGTAGATCTGTTCTCTAAACGAACTTTAAAATCTGTGTGGCTGTCACTCGGCTGCATGCTTAGTGCACTCACGCAGTATAATTAATAACTAATTACTGTCGTTGACAGGACACGAGTAACTCGTCTATCTTCTGCAGGCTGCTTACGGTTTCGTCCGTGTTGCAGCCGATCATCAGCACATCTAGGTTTCGTCCGGGTGTGACCGAAAGGTAAGATGGAGAGCCTTGTCCCTG1- C1059T C3037T C12241T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT461666 EPI_ISL_437870,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6573/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- AACC34TTTA C241T C1059T C3037T C6026T C14408T A23403G G25563T C28836T >MT461667 EPI_ISL_437871,2020-04-03,SARS-CoV-2/human/USA/CT-UW-6574/2020,United States / Connecticut ATTAAAG1- AAC34TTT C241T C1059T C1917T C3037T C14262T C14408T A23403G G25563T A29903- >MT461668 EPI_ISL_437872,2020-04-02,SARS-CoV-2/human/USA/CT-UW-6576/2020,United States / Connecticut ATTAAAGGTTTATACCTTCCCAGGTAA1- AAC34TTT C241T C1059T C3037T C11916T C14408T C18252T A23403G G25563T -29904AAAAA >MT466071 EPI_ISL_444493,2020-03-13,SARS-CoV-2/human/URY/Mdeo-1/2020,Uruguay / Montevideo C8782T C17470T C26088T T28144C >MT466583 ,2020-03-15,SARS-CoV-2/human/USA/AK002/2020,United States / AK ATTAAAGGTTTATACC1- C241T C3037T C6504T C14408T A23403G GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT467237 EPI_ISL_444456,2020-04-26,SARS-CoV-2/human/IND/GBRC25/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C10277T C14408T C18877T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467238 EPI_ISL_444477,2020-04-29,SARS-CoV-2/human/IND/GBRC46/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C832T C3037T T13914C G14028T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467239 EPI_ISL_444457,2020-04-26,SARS-CoV-2/human/IND/GBRC26/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C10277T C14408T C18877T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467240 EPI_ISL_444478,2020-04-30,SARS-CoV-2/human/IND/GBRC47/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T G4866T C14408T C14425A G22030T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467241 EPI_ISL_444458,2020-04-26,SARS-CoV-2/human/IND/GBRC27/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T G4866T C14408T C14425A C19017T A23403G C29769T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467242 EPI_ISL_444479,2020-04-29,SARS-CoV-2/human/IND/GBRC48/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T T20063C A23403G C23638T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467243 EPI_ISL_444459,2020-04-30,SARS-CoV-2/human/IND/GBRC28/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T C15654T G16078A C18877T C22444T G23311T A23403G C24502T G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467244 EPI_ISL_444460,2020-04-30,SARS-CoV-2/human/IND/GBRC29/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A14673G A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467245 EPI_ISL_444461,2020-04-29,SARS-CoV-2/human/IND/GBRC30/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467246 EPI_ISL_444471,2020-04-29,SARS-CoV-2/human/IND/GBRC40/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T C18877T A23403G G25563T C26735T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT467247 EPI_ISL_444462,2020-04-29,SARS-CoV-2/human/IND/GBRC31/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C3737T G4866T C12710T C14408T C14425A T21890C A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467248 EPI_ISL_444472,2020-04-29,SARS-CoV-2/human/IND/GBRC41/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467249 EPI_ISL_444463,2020-04-29,SARS-CoV-2/human/IND/GBRC32/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C6145T C14408T A23403G G23593T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467250 EPI_ISL_444473,2020-04-29,SARS-CoV-2/human/IND/GBRC42/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G C24237T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467251 EPI_ISL_444474,2020-04-29,SARS-CoV-2/human/IND/GBRC43/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T A3517G C14408T C18877T A23403G C24042T G25563T C26735T C28948T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467252 EPI_ISL_444475,2020-04-29,SARS-CoV-2/human/IND/GBRC44/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C3737T G4866T A6748G C14408T C14425A T21890C A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467253 EPI_ISL_444476,2020-04-29,SARS-CoV-2/human/IND/GBRC45/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C13536T C14408T C18877T C22444T C23277T A23403G G25563T C26735T A28254C C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467254 EPI_ISL_444464,2020-04-29,SARS-CoV-2/human/IND/GBRC33/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T G2518T C2836T C3037T A12507G C14408T C18877T C22444T A23403G G25563T C26735T G28739T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467255 EPI_ISL_444480,2020-04-30,SARS-CoV-2/human/IND/GBRC49/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T C17004T A18134G C18877T A23403G G25563T C26735T C27603T A28390G C28948T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467256 EPI_ISL_444465,2020-04-29,SARS-CoV-2/human/IND/GBRC34/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T C23277T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467257 EPI_ISL_444481,2020-04-30,SARS-CoV-2/human/IND/GBRC50/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467258 EPI_ISL_444466,2020-04-29,SARS-CoV-2/human/IND/GBRC35/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T C23277T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467259 EPI_ISL_444482,2020-05-02,SARS-CoV-2/human/IND/GBRC51/2020,India / Gujarat / Prantij ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T C18877T A23403G G25563T C26735T C28311T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467260 EPI_ISL_444483,2020-05-02,SARS-CoV-2/human/IND/GBRC52/2020,India / Gujarat / Prantij ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C9438T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467261 EPI_ISL_444484,2020-05-04,SARS-CoV-2/human/IND/GBRC53/2020,India / Gujarat / Modasa ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C12616T C14408T C18877T G21795T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467262 EPI_ISL_444485,2020-05-04,SARS-CoV-2/human/IND/GBRC54/2020,India / Gujarat / Modasa ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C12616T C14408T C18877T G21795T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT467263 EPI_ISL_444486,2020-05-04,SARS-CoV-2/human/IND/GBRC55/2020,India / Gujarat / Dhansura ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C6402T C14408T C18877T G21724T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT470100 EPI_ISL_447654,2020-03,SARS-CoV-2/human/France/10027AA/2020,France A2480G C2558T G11083T C14805T G22021T G24095T G26144T >MT470101 EPI_ISL_447655,2020-03,SARS-CoV-2/human/France/70001GR/2020,France C241T C3037T C14177T C14408T C15324T A23403G >MT470102 EPI_ISL_447656,2020-03,SARS-CoV-2/human/France/40004SR/2020,France C241T C3037T C14408T C15324T A23403G >MT470103 EPI_ISL_447657,2020-03,SARS-CoV-2/human/France/50010DC/2020,France C241T C3037T C14408T C15852T A23403G C27046T GGG28881AAC >MT470104 EPI_ISL_447658,2020-03,SARS-CoV-2/human/France/40005BH/2020,France C66T C7334T A7479G G11083T C14805T C15222T T17247C C21575T C25572T G26144T >MT470105 EPI_ISL_447659,2020-03,SARS-CoV-2/human/France/60003NG/2020,France C2416T C3037T G8371T A23403G G25563T >MT470106 EPI_ISL_447660,2020-03,SARS-CoV-2/human/France/10036BG/2020,France C241T C3037T C14408T C15324T A23403G G28202A >MT470107 EPI_ISL_447661,2020-03,SARS-CoV-2/human/France/10037CJ/2020,France C241T C2416T C3037T C14408T A23403G G25563T G27382T >MT470108 EPI_ISL_447662,2020-03,SARS-CoV-2/human/France/40006SG/2020,France A2480G C2558T G11083T C14805T G24095T G26144T >MT470109 EPI_ISL_447663,2020-03,SARS-CoV-2/human/France/10030NV/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470110 EPI_ISL_447664,2020-03,SARS-CoV-2/human/France/10040LJ/2020,France C241T C3037T C14408T C15324T A23403G >MT470111 EPI_ISL_447665,2020-03,SARS-CoV-2/human/France/10041MR/2020,France C6040T C6312A G11083T C13730T C23929T C28311T >MT470112 EPI_ISL_447666,2020-03,SARS-CoV-2/human/France/20001SE/2020,France C241T C2416T C3037T G8371T C14408T A23403G G25563T >MT470113 EPI_ISL_447667,2020-03,SARS-CoV-2/human/France/10048SA/2020,France C241T C3037T C14408T C15324T A23403G C24621T >MT470114 EPI_ISL_447668,2020-03,SARS-CoV-2/human/France/10046GM/2020,France C241T C3037T A3428C C14408T C15324T A23403G >MT470115 EPI_ISL_447669,2020-03,SARS-CoV-2/human/France/10029DT/2020,France C241T C14408T A23403G >MT470116 EPI_ISL_447670,2020-03,SARS-CoV-2/human/France/10031BS/2020,France C241T C3037T C6541T C14408T C23393T A23403G G29260T >MT470117 EPI_ISL_447671,2020-03,SARS-CoV-2/human/France/60002VV/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470118 EPI_ISL_447672,2020-03,SARS-CoV-2/human/France/10032KL/2020,France C241T C3037T C14408T C15324T A23403G >MT470119 EPI_ISL_447673,2020-03,SARS-CoV-2/human/France/50008KC/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470120 EPI_ISL_447674,2020-03,SARS-CoV-2/human/France/10033ZM/2020,France C241T C1059T C3037T C14408T A23403G G25563T G26101T >MT470121 EPI_ISL_447675,2020-03,SARS-CoV-2/human/France/10034HM/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470122 EPI_ISL_447676,2020-03,SARS-CoV-2/human/France/10050RA/2020,France A2480G C2558T G11083T C14805T C22088A G24095T G26144T >MT470123 EPI_ISL_447677,2020-03,SARS-CoV-2/human/France/10045DZ/2020,France C241T C2416T C3037T G11083T C14322T C14408T A23403G G25563T T26038C A28254T >MT470124 EPI_ISL_447678,2020-03,SARS-CoV-2/human/France/10051SM/2020,France C241T C3037T C14408T C15324T G15380T C16178T A23403G >MT470125 EPI_ISL_447679,2020-03,SARS-CoV-2/human/France/10063BI/2020,France C241T T8004C G20477T G22698T A23403G C25350T C25609T C26728T GGG28881AAC >MT470126 EPI_ISL_447680,2020-03,SARS-CoV-2/human/France/10066GJ/2020,France C241T C1059T C3037T A9848G C14408T A23403G G25563T T29867A >MT470127 EPI_ISL_447681,2020-03,SARS-CoV-2/human/France/10069NM/2020,France C241T C3037T C6016A T10561C C14408T C15324T C21575T A23403G >MT470128 EPI_ISL_447682,2020-03,SARS-CoV-2/human/France/10071BR/2020,France C241T C2416T C3037T C14408T A23403G G25563T >MT470129 EPI_ISL_447683,2020-03,SARS-CoV-2/human/France/10060KV/2020,France >MT470130 EPI_ISL_447684,2020-03,SARS-CoV-2/human/France/10074LD/2020,France >MT470131 EPI_ISL_447685,2020-03,SARS-CoV-2/human/France/10072CG/2020,France >MT470132 EPI_ISL_447686,2020-03,SARS-CoV-2/human/France/10076MH/2020,France C241T C1059T C3037T T13006C C14408T C23277T A23403G G25563T C25688T >MT470133 EPI_ISL_447687,2020-03,SARS-CoV-2/human/France/10078MA/2020,France C241T C3037T C14408T C15324T A23403G >MT470134 EPI_ISL_447688,2020-03,SARS-CoV-2/human/France/10057CJ/2020,France C241T G6975T C6982T C14408T A23403G G25563T G29777T >MT470135 EPI_ISL_447689,2020-03,SARS-CoV-2/human/France/10062MD/2020,France C2416T C3037T C14408T A23403G G25563T A25853G >MT470136 EPI_ISL_447690,2020-03,SARS-CoV-2/human/France/10059IS/2020,France C241T C3037T C12076T C14408T C15324T A23403G >MT470137 EPI_ISL_447691,2020-03,SARS-CoV-2/human/France/10068ND/2020,France C241T A23403G >MT470138 EPI_ISL_447692,2020-03,SARS-CoV-2/human/France/40007RD/2020,France C241T C3037T C14408T C15324T A23403G >MT470139 EPI_ISL_447693,2020-03,SARS-CoV-2/human/France/5003KM/2020,France A2480G C2558T G11083T C14805T G24095T G26144T >MT470140 EPI_ISL_447694,2020-03,SARS-CoV-2/human/France/50002BS/2020,France C241T C3037T C14408T C15324T A23403G >MT470141 EPI_ISL_447695,2020-03,SARS-CoV-2/human/France/10004CF/2020,France >MT470142 EPI_ISL_447696,2020-03,SARS-CoV-2/human/France/10009EE/2020,France C11758T >MT470143 EPI_ISL_447697,2020-03,SARS-CoV-2/human/France/10008DM/2020,France C241T C3037T C14408T C15324T A23403G >MT470144 EPI_ISL_447698,2020-03,SARS-CoV-2/human/France/50001AR/2020,France C241T C1059T C3037T C14408T C14925T C16045T A23403G C23589T C25047T G25563T >MT470145 EPI_ISL_447699,2020-03,SARS-CoV-2/human/France/10010LA/2020,France T1372C C1420T A2480G C2558T G11083T C14805T G24095T G26144T >MT470146 EPI_ISL_447700,2020-03,SARS-CoV-2/human/France/10014BC/2020,France C241T T778C C1059T C3037T T13006C C14408T A23403G G25563T C25688T >MT470147 EPI_ISL_447701,2020-03,SARS-CoV-2/human/France/10080AA/2020,France C241T C1059T C3037T C10582T C14408T A23403G G25563T C27059T >MT470148 EPI_ISL_447702,2020-03,SARS-CoV-2/human/France/10019LM/2020,France C241T C3037T C14408T C15324T A23403G >MT470149 EPI_ISL_447703,2020-03,SARS-CoV-2/human/France/10018HJ/2020,France C241T C2416T C3037T C4900T C14408T A23403G G25563T >MT470150 EPI_ISL_447704,2020-03,SARS-CoV-2/human/France/10020MM/2020,France >MT470151 EPI_ISL_447705,2020-03,SARS-CoV-2/human/France/50005JM/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470152 EPI_ISL_447706,2020-03,SARS-CoV-2/human/France/50004CS/2020,France A2480G C2558T G11083T C14805T G24095T G26144T >MT470153 EPI_ISL_447707,2020-03,SARS-CoV-2/human/France/10016DC/2020,France C241T C3037T C14408T C15324T C21575T A23403G >MT470154 EPI_ISL_447708,2020-03,SARS-CoV-2/human/France/10015BY/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470155 EPI_ISL_447709,2020-03,SARS-CoV-2/human/France/10012BM/2020,France C241T C3037T C14408T C15324T A23403G >MT470156 EPI_ISL_447710,2020-03,SARS-CoV-2/human/France/10017GS/2020,France C241T C313T C3037T C14408T A23403G GGG28881AAC >MT470157 EPI_ISL_447711,2020-03,SARS-CoV-2/human/France/10013BA/2020,France C241T C1059T C3037T C14184T C14408T A23403G G25563T >MT470158 EPI_ISL_447712,2020-03,SARS-CoV-2/human/France/10021SB/2020,France >MT470159 EPI_ISL_447713,2020-03,SARS-CoV-2/human/France/10011AS/2020,France A2480G C2558T C8722T G11083T C14805T A15033C G24095T G26144T >MT470160 EPI_ISL_447714,2020-03,SARS-CoV-2/human/France/10023FD/2020,France C241T C1059T C3037T T10933C C14408T T17142C T22707A A23403G G25563T >MT470161 EPI_ISL_447715,2020-03,SARS-CoV-2/human/France/10022AR/2020,France C241T C2416T C3037T G8371T C14408T A23403G G25563T >MT470162 EPI_ISL_447716,2020-03,SARS-CoV-2/human/France/50011LM/2020,France C241T C3037T C14408T C15324T A23403G >MT470163 EPI_ISL_447717,2020-03,SARS-CoV-2/human/France/10001DM/2020,France >MT470164 EPI_ISL_447718,2020-03,SARS-CoV-2/human/France/50007PI/2020,France C241T C3037T C14408T C15324T A23403G C27208T >MT470165 EPI_ISL_447719,2020-03,SARS-CoV-2/human/France/10003SN/2020,France C241T C3037T C14408T C15324T A23403G >MT470166 EPI_ISL_447720,2020-03,SARS-CoV-2/human/France/10025GM/2020,France C241T C1059T C3037T G11083T C14408T A23403G G25563T G29422A >MT470167 EPI_ISL_447721,2020-03,SARS-CoV-2/human/France/10002PM/2020,France C241T C3037T C14408T C15324T A23403G >MT470168 EPI_ISL_447722,2020-03,SARS-CoV-2/human/France/10026SL/2020,France C241T C1059T C3037T C14408T C14925T C16045T C18167T A23403G C23589T C25047T G25563T >MT470169 EPI_ISL_447723,2020-03,SARS-CoV-2/human/France/30001MB/2020,France C241T C2416T C3037T C14408T A23403G G25563T >MT470170 EPI_ISL_447724,2020-03,SARS-CoV-2/human/France/40003KA/2020,France C241T C1059T C3037T C14408T A23403G G25563T >MT470171 EPI_ISL_447725,2020-03,SARS-CoV-2/human/France/10007LJ/2020,France C241T C3037T C14408T T19839C A23403G GGG28881AAC >MT470172 EPI_ISL_447726,2020-03,SARS-CoV-2/human/France/10028CD/2020,France C241T C1059T C3037T C14408T A23403G G25489T G25563T >MT470173 EPI_ISL_447727,2020-03,SARS-CoV-2/human/France/10006HC/2020,France C241T C3037T C14408T C15324T A23403G >MT470174 EPI_ISL_447728,2020-03,SARS-CoV-2/human/France/10053BP/2020,France >MT470175 EPI_ISL_447729,2020-03,SARS-CoV-2/human/France/10064DR/2020,France >MT470176 EPI_ISL_447730,2020-03,SARS-CoV-2/human/France/10065EE/2020,France C241T C3037T T10561C C14408T C15324T A23403G C26895T C29013T >MT470177 EPI_ISL_447731,2020-03,SARS-CoV-2/human/France/10070SK/2020,France C3037T A10081T C14408T C22281T A23403G >MT470178 EPI_ISL_447732,2020-03,SARS-CoV-2/human/France/50006PT/2020,France C241T C2416T C3037T G8371T C14408T A23403G G25563T >MT470179 EPI_ISL_447733,2020-03,SARS-CoV-2/human/France/40002VJ/2020,France C241T C2416T G12079C C14408T C23220A >MT470219 EPI_ISL_445085;EPI_ISL_445219,2020-04-02,SARS-CoV-2/human/COL/Cali-01/2020,Colombia C241T C1059T C3037T C14408T A23122T A23403G G25563T >MT472621 EPI_ISL_447844,2020-03-08,SARS-CoV-2/human/USA/PA-CDC-2908/2020,United States / PA C241T C3037T C14408T C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT472622 EPI_ISL_447843,2020-03-04,SARS-CoV-2/human/USA/MD-CDC-0025/2020,United States / MD C241T C1221Y C3037T C5211Y C14408T G14874K C16586Y C18877T A23403G G25563T AAAAAAAAAAAAAAAAAAAAA29883- >MT472623 EPI_ISL_447846,2020-03-05,SARS-CoV-2/human/USA/VT-CDC-0303/2020,United States / VT C8782T C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAA29883- >MT472624 EPI_ISL_447841,2020-03-06,SARS-CoV-2/human/USA/FL-CDC-7619/2020,United States / FL C241T C683Y C3037T G4263K C4703Y A4725W C5184Y C5654Y A5891R C12123Y C14408T C14662Y C18877T A23403G G25563T G25696K G26596K C28475Y C28687Y AAAAAAAAAAAAAAAAAAAAA29883- >MT472625 EPI_ISL_447845,2020-03-08,SARS-CoV-2/human/USA/PR-CDC-3578/2020,United States / PR C241T C3037T C5284Y T8647Y C11339Y T12629C C14408T C17649Y A23403G C25731Y C27161Y T29470A AAAAAAAAAAAAAAAAAAAAA29883- >MT472626 EPI_ISL_447842,2020-03-07,SARS-CoV-2/human/USA/IA-CDC-8200/2020,United States / IA C241T C3037T C14408T G22335T A23403G G28931A AAAAAAAAAAAAAAAAAAAAA29883- >MT472627 EPI_ISL_447840,2020-03-08,SARS-CoV-2/human/USA/DC-CDC-0019/2020,United States / DC C241T C3037T C14408T A23403G AAAAAAAAAAAAAAAAAAAAA29883- >MT474126 EPI_ISL_445169,2020-03-28,SARS-CoV-2/human/USA/CA-CZB-1121/2020,United States / California / San Francisco ATTA1- C241T C1059T G1148A C3037T C9857T T10129Y G12613A C14408T G19711A G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT474127 EPI_ISL_445170,2020-03-27,SARS-CoV-2/human/USA/CA-CZB-1122/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C8782T T10129Y C16308T C17747T A17858G C18060T TTTGGGTGTTTA21982- T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474128 EPI_ISL_445171,2020-03-27,SARS-CoV-2/human/USA/CA-CZB-1123/2020,United States / California / San Francisco ATTAAAGGTTTATACC1- C241T C3037T T10129Y C14408T A23403R G28001T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474129 EPI_ISL_445172,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1124/2020,United States / California / San Francisco C8782T T10129C C17747T A17858G C18060T T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT474130 EPI_ISL_445173,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-1125/2020,United States / California / San Francisco ATTAAAGGTTTA1- C8782T T10129C C17747T A17858G C18060T TTA26159- T28144C AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474131 EPI_ISL_445174,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-1126/2020,United States / California / San Francisco ATTAA1- C8782T T13839A C16308T C17747T A17858G C18060T C18681T A26554G T28144C G28845A AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474132 EPI_ISL_445175,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1127/2020,United States / California / San Francisco AT1- C241T C3037T C4540T G4904T G5206T C14408T G14653K A23403R C24138T C25350T AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT474133 EPI_ISL_445176,2020-04-05,SARS-CoV-2/human/USA/CA-CZB-1128/2020,United States / California / San Francisco ATTAAAG1- C241T C3037T C14408T A23403R G25244T A28858G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474134 EPI_ISL_445177,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-1129/2020,United States / California / San Francisco ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403R G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474135 EPI_ISL_445179,2020-03-31,SARS-CoV-2/human/USA/CA-CZB-1131/2020,United States / California / San Francisco ATTAAAGGTTT1- C241T C1059T C3037T C14408T G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474136 EPI_ISL_445180,2020-03-30,SARS-CoV-2/human/USA/CA-CZB-1132/2020,United States / California / San Francisco AT1- C241T C1059T G1685A A2018G C3037T C14408T G17149A A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT474137 EPI_ISL_445181,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-1133/2020,United States / California / San Francisco ATT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C26895T C27964T >MT474138 EPI_ISL_445182,2020-04-12,SARS-CoV-2/human/USA/CA-CZB-1134/2020,United States / California / San Francisco ATT1- C241T C1059T C3037T C11916T C14408T C18998T C19102T A20898G A23403G G25563T G29540A >MT476384 EPI_ISL_447900,2020-02-21,SARS-CoV-2/ENV/USA/UF-11/2020,United States / FL -A1TTAAAGGT C8781T C17746T A17857G C18059T T28143C AAAAAAAAAAAAAAAA29887- >MT476385 EPI_ISL_437912,2020-04-18,SARS-CoV-2/human/BGD/CHRF_0001/2020,Bangladesh / Dhaka A1- C241T A1163T C3037T C14408T G17019T A23403G GGG28881AAC >MT477835 ,2020-03-15,SARS-CoV-2/human/USA/AK003/2020,United States / AK ATTAAAGGTTTAT1- C241T C3037T C6504T C14408T A23403G GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT477836 ,2020-03-16,SARS-CoV-2/human/USA/AK006/2020,United States / AK ATTAAAGGTTTATACCTTCCC1- C241T C3037T C14408T A20268G A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT477837 ,2020-03-17,SARS-CoV-2/human/USA/AK010/2020,United States / AK ATTAAAGGTTTATACC1- C241T C3037T C6504T C14408T A19403W C21530Y T21585Y A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT477838 ,2020-03-17,SARS-CoV-2/human/USA/AK011/2020,United States / AK ATTAAAGGTTT1- T2266C C6027T A10236G G11083T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT477839 ,2020-03-19,SARS-CoV-2/human/USA/AK013/2020,United States / AK ATTAAAGGTTTA1- C241T C3037T C6504T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAA29876- >MT477840 ,2020-03-18,SARS-CoV-2/human/USA/AK015/2020,United States / AK ATTAAAGGTTTA1- T2266C C6027T C7979M A10236G G11083T C14805T T17247C G26144T AAAAAAAAAAAAAA29890- >MT477841 ,2020-03-18,SARS-CoV-2/human/USA/AK016/2020,United States / AK ATTAAAGGTTTAT1- T2266C C6027T A10236G G11083T C14805T T17247C G26144T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT477842 ,2020-03-23,SARS-CoV-2/human/USA/AK034/2020,United States / AK ATTAAAG1- C241T C1059T C3037T C14408T G15760A A23403G G25563T G26062T >MT477843 ,2020-03-21,SARS-CoV-2/human/USA/AK037/2020,United States / AK ATTAAAGGTTTAT1- T2266C C6027T A10236G G11083T C14805T T17247C G26144T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT477844 ,2020-03-24,SARS-CoV-2/human/USA/AK040/2020,United States / AK ATTAAAGGTTTA1- C241T C1059T C3037T C3293T C14408T A21825C A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT477845 ,2020-03-23,SARS-CoV-2/human/USA/AK041/2020,United States / AK ATTAAAGGTTTATA1- C241T C313T C3037T C14408T G19518T A23403G G28845T GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT477846 ,2020-04-07,SARS-CoV-2/human/USA/AK052/2020,United States / AK ATTAAAGGTTTAT1- C241T C3037T C6504T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT477847 ,2020-03-28,SARS-CoV-2/human/USA/AK070/2020,United States / AK ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT477848 ,2020-03-27,SARS-CoV-2/human/USA/AK074/2020,United States / AK ATTAAAGGTTTATACC1- C241T C1059T C3037T A6325M C14408T A23403G G25563T G28044T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT477849 ,2020-03-29,SARS-CoV-2/human/USA/AK077/2020,United States / AK ATTAAAGGTTTATAC1- C241T C3037T C6504T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT477850 ,2020-04-02,SARS-CoV-2/human/USA/AK092/2020,United States / AK ATTAAAGGTTTATA1- C241T T1978A C3037T C6504T C12781T C14408T A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT477851 ,2020-04-04,SARS-CoV-2/human/USA/AK101/2020,United States / AK ATTAAAGGTTTAT1- C241T C1059T C3037T C14408T C16457T A23403G G25523T G25563T T27869C GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT477852 ,2020-03-25,SARS-CoV-2/human/USA/AK115/2020,United States / AK ATTAAAGGTTT1- C241T C3037T G8600T C14408T A23403G C25350T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT477853 ,2020-03-24,SARS-CoV-2/human/USA/AK118/2020,United States / AK ATTAAAGGTTTAT1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT477854 ,2020-03-24,SARS-CoV-2/human/USA/AK122/2020,United States / AK ATTAAAGGTTTATACCTTCC1- C241T T833C C1059T C3037T C14408T A23403G G25563T C27964T C28606T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT477855 ,2020-04-07,SARS-CoV-2/human/USA/AK151/2020,United States / AK ATTAAAGGTTTATACC1- C241T C1059T C3037T C14408T A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT477856 ,2020-04-07,SARS-CoV-2/human/USA/AK152/2020,United States / AK ATTAAAGGTTT1- C241T C1059T C3037T G11083T C14408T C16457T G22201A A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT477857 ,2020-04-07,SARS-CoV-2/human/USA/AK153/2020,United States / AK ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT477858 ,2020-04-08,SARS-CoV-2/human/USA/AK178/2020,United States / AK ATTAAAGGTTTATACC1- C241T C1059T C3037T G11083T C14408T C16457T G22201A A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT477859 ,2020-04-08,SARS-CoV-2/human/USA/AK180/2020,United States / AK ATTAAAGGTTTA1- C241T C799T C3037T G14290T C14408T A23403G C26892T C27710Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT477860 ,2020-04-09,SARS-CoV-2/human/USA/AK193/2020,United States / AK ATTAAAGGTTTATAC1- C241T C1059T C3037T G11083T C14408T C16457T G22201A A23403G G25523T G25563T T27869C AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT477861 ,2020-04-12,SARS-CoV-2/human/USA/AK200/2020,United States / AK ATTAAAGGTTTA1- C241T C2416T C3037T C4755T C14408T C20148T A23403G G25563T G26233T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29873- >MT477862 ,2020-04-26,SARS-CoV-2/human/USA/AK283/2020,United States / AK C241T G362A C1059T C3037T A5011C C14408T G23120T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT477885 ,2020-03-25,SARS-CoV-2/human/IND/OUMRK1090/2020,India ATTA1- C6312A G11083T C13730T C23929T C28311T C29870A >MT477903 ,2020-04-07,SARS-CoV-2/human/USA/UF-10/2020,United States / FL ATTAAAGGTTT1- C241T C3037T C4540T G4904T G5206T C14408T A23403G C23606T C24138T C25350T A25744G >MT477904 ,2020-04-29,SARS-CoV-2/human/USA/UF-9/2020,United States / FL ATTAAAGGTTT1- C241T C1059T C1917T C3037T C14408T A23403G G25563T >MT479223 EPI_ISL_444274,2020-02-29,SARS-CoV-2/human/TWN/CGMH-CGU-21/2020,China / Taiwan / Taoyuan ATT1- C1059T G1397A C7521T G11083T A12555C C23606T C23934T T28648C T28688C G29742T >MT479224 EPI_ISL_444275,2020-03-18,SARS-CoV-2/human/TWN/CGMH-CGU-22/2020,China / Taiwan / Taoyuan ATT1- CTATACATGTCTCTGGGACCAATGGTA21762- ATCAGACTCAGACTA23583- C28776A A29903- >MT479225 EPI_ISL_444276,2020-03-21,SARS-CoV-2/human/TWN/CGMH-CGU-23/2020,China / Taiwan / Taoyuan A1- C241T C3037T C14408T C18877T A23403G G25563T >MT479226 EPI_ISL_444277,2020-03-20,SARS-CoV-2/human/TWN/CGMH-CGU-24/2020,China / Taiwan / Taoyuan AT1- C241T C1314T C3037T G9601A C14408T A23403G G28703T GGG28881AAC C29857T A29903- >MT479227 EPI_ISL_444278,2020-03-20,SARS-CoV-2/human/TWN/CGMH-CGU-25/2020,China / Taiwan / Taoyuan ATTA1- C241T C379A T577A C1059T C3037T T12511C C14408T A23403G G25563T >MT481927 EPI_ISL_447887,2020-03-27,SARS-CoV-2/human/USA/CA-CZB-1136/2020,United States / CA ATTAAA1- C241T C1059T C3037T C14408T C17410A C19610T A23403G G25563T C27964T >MT481928 EPI_ISL_447888,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1137/2020,United States / CA ATTAAAGGTTTATA1- C241T C1059T C3037T C14408T C17410A A23403G G25563T C27964T >MT481929 EPI_ISL_447889,2020-04-01,SARS-CoV-2/human/USA/CA-CZB-1138/2020,United States / CA ATTAAAGGTTTA1- C241T GTT669- C1059T C3037T C14408T C18457T A23403G C25487T G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481930 EPI_ISL_447890,2020-04-02,SARS-CoV-2/human/USA/CA-CZB-1139/2020,United States / CA ATTAAAGGTTTATA1- C241T GTT669- C1059T C3037T C14408T C15182G C18457T A23403G C25487T G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481931 EPI_ISL_447891,2020-04-01,SARS-CoV-2/human/USA/CA-CZB-1140/2020,United States / CA ATTAAAGGTTTATAC1- C241T C1059T C3037T C9561T C14408T C17410A T21434W A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481932 EPI_ISL_447892,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1141/2020,United States / CA ATTAAAGGTTT1- C241T C1059T C3037T C9561T C14408T C17410A A23403G G25563T C27964T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT481933 EPI_ISL_447893,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-1142/2020,United States / CA ATTAAAGGTT1- C241T C1059T C3037T C9561T C14408T C17410A A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481934 EPI_ISL_447894,2020-04-06,SARS-CoV-2/human/USA/CA-CZB-1143/2020,United States / CA ATTAAAGGTTTA1- C241T C1059T C3037T C9561T C14408T C17410A A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481935 EPI_ISL_447895,2020-04-08,SARS-CoV-2/human/USA/CA-CZB-1144/2020,United States / CA ATTAAAGGTTTA1- C241T C1059T C3037T C9561T C14408T C17410A A23403G G25563T C27964T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT481936 EPI_ISL_447896,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1145/2020,United States / CA ATTAAAGGTTTA1- G2840A C8782T C17747T A17858G C18060T A26045G T28144C >MT481992 EPI_ISL_447886,2020-03-23,SARS-CoV-2/human/USA/CA-CDC-0139/2020,United States A12631G >MT482110 EPI_ISL_437763,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0118/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T9172C A10948G C14408T C21575T C21998T A23403G G26730T GGG28881AAC C29870A >MT482111 EPI_ISL_437764,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0120/2020,United States / Virginia ATTAAA1- C241T C3037T T9172C C10818T A10948G C14408T C21575T C21998T A23403G G26730T GGG28881AAC TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT482112 EPI_ISL_437765,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0126/2020,United States / Virginia C241T C1059T C2110T C2997T C3037T C10319T A12286G C12729T C13665T C14408T A23403G G25563T C27964T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT482113 EPI_ISL_437766,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0127/2020,United States / Virginia ATTAAAGGTTT1- C241T C1059T C3037T A5337G C9857T C10319T A12286G C12729T C13665T C14408T A23403G G25563T C27964T C29870A >MT482114 EPI_ISL_437767,2020-04-10,SARS-CoV-2/human/USA/VA-DCLS-0128/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C10319T A12286G C12729T C13665T C14408T A23403G G25563T C27964T G29868A C29870A >MT482115 EPI_ISL_437768,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0129/2020,United States / Virginia ATTAAA1- C241T C1059T C3037T C10319T A12286G C12729T C13665T C14408T A23403G G25563T C27964T >MT482116 EPI_ISL_437769,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0130/2020,United States / Virginia A1- C241T C3037T C4540T C7600T C14408T C15324T A23403G >MT482117 EPI_ISL_437770,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0131/2020,United States / Virginia ATTAAAG1- C241T C1059T C3037T C14408T C21575T A23403G C25318T G25563T C29870A >MT482118 EPI_ISL_437771,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0132/2020,United States / Virginia AT1- C241T C1059T C3037T C8722T C14408T C17518T C21952G A23403G G25563T >MT482119 EPI_ISL_437772,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0133/2020,United States / Virginia ATTA1- C241T C1059T C3037T C14408T C16575T A23403G G25563T T26861C G28212A G29449T C29870A >MT482120 EPI_ISL_437773,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0134/2020,United States / Virginia ATT1- C241T C3037T C14408T C15324T A21137G G21334T A23403G C23635T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT482121 EPI_ISL_437774,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0135/2020,United States / Virginia ATTAAAGGTTT1- C241T C1059T C3037T C14408T C16575T A23403G G25563T G29449T >MT482122 EPI_ISL_437775,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0136/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C3037T C14408T C15324T A21137G A23403G C23635T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT482123 EPI_ISL_437776,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0137/2020,United States / Virginia ATTAAAGGTTTATACC1- C241T C1392T C3037T C3874T C10296T C14408T C15324T A23403G C29870A >MT482124 EPI_ISL_437777,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0138/2020,United States / Virginia C241T C3037T C14408T C15324T A21137G G21334T A23403G C23635T >MT482125 EPI_ISL_437778,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0139/2020,United States / Virginia ATTAAAGGT1- C241T C3037T C14408T C15324T A21137G A23403G C23635T C29870A >MT482126 EPI_ISL_437779,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0140/2020,United States / Virginia A1- C241T C3037T C14408T C15324T A21137G A23403G C23635T C29870M >MT482127 EPI_ISL_437780,2020-04-17,SARS-CoV-2/human/USA/VA-DCLS-0141/2020,United States / Virginia AT1- C241T C3037T C14408T C15324T A21137G A23403G C23635T >MT482128 EPI_ISL_437781,2020-04-17,SARS-CoV-2/human/USA/VA-DCLS-0142/2020,United States / Virginia ATTAAAGGTT1- C241T C1059T C3037T C4230A C14408T A23403G C25318T G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT482129 EPI_ISL_437782,2020-04-17,SARS-CoV-2/human/USA/VA-DCLS-0144/2020,United States / Virginia AT1- C241T C3037T C7600T C14408T C15324T A23403G C29870M >MT482130 EPI_ISL_437783,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0146/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C3037T C9521T C14408T C15324T A21137G A23403G C23635T >MT482131 EPI_ISL_437784,2020-04-17,SARS-CoV-2/human/USA/VA-DCLS-0151/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T C14408T C15615T A23403G G25563T C25688A TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT482132 EPI_ISL_437785,2020-04-17,SARS-CoV-2/human/USA/VA-DCLS-0152/2020,United States / Virginia A1- C241T C1059T C3037T C14408T A23403G G25563T C25688A GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT482133 EPI_ISL_437786,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0153/2020,United States / Virginia AT1- C241T C1102T C3037T T9172C C10036T A10948G C14408T A23403G G26730T GGG28881AAC CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29870- >MT482134 EPI_ISL_437787,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0154/2020,United States / Virginia ATTAAAGGTT1- A2480G C2558T TATTGAAGTGAA3331- G11083T C14805T G26144T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT482135 EPI_ISL_437788,2020-04-09,SARS-CoV-2/human/USA/VA-DCLS-0155/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C1917T C3037T C14408T A23403G G25563T C29870V >MT482136 EPI_ISL_437789,2020-04-11,SARS-CoV-2/human/USA/VA-DCLS-0156/2020,United States / Virginia ATTAA1- C241T C1059T C3037T C14408T A23403G G25563T C29870A >MT482137 EPI_ISL_437790,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0157/2020,United States / Virginia ATTAAAGGTT1- C241T C1059T C3037T C14408T C22624T A23403G G25563T >MT482138 EPI_ISL_437791,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0158/2020,United States / Virginia ATTAAAGGT1- C241T C1059T C3037T C14408T A23403G G25563T >MT482139 EPI_ISL_437792,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0159/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T G29868A >MT482140 EPI_ISL_437793,2020-04-14,SARS-CoV-2/human/USA/VA-DCLS-0160/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C14408T C18246T A23403G G25563T TTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29858- >MT482141 EPI_ISL_437794,2020-04-15,SARS-CoV-2/human/USA/VA-DCLS-0161/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C1917T C3037T C4577T C14408T C15371T A23403G G25563T >MT482142 EPI_ISL_437795,2020-04-16,SARS-CoV-2/human/USA/VA-DCLS-0162/2020,United States / Virginia AT1- C241T C1059T C3037T G4510C C14408T G23311T A23403G G25563T >MT482143 EPI_ISL_437796,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0163/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6027T A10236G G11083T C14805T T17247C G26144T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT482144 EPI_ISL_437797,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0164/2020,United States / Virginia ATTA1- C6027T C7749T A10236G G11083T C14805T T17247C G26144T AGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29860- >MT482145 EPI_ISL_437798,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0165/2020,United States / Virginia ATTAA1- C6027T A10236G G11083T C14805T T17247C G26144T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT482146 EPI_ISL_437799,2020-04-08,SARS-CoV-2/human/USA/VA-DCLS-0166/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C6027T A10236G C11074T G11083T C14805T T17247C C22987A G26144T C29870A >MT482147 EPI_ISL_437800,2020-04-01,SARS-CoV-2/human/USA/VA-DCLS-0167/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G20991T A23403G G25563T C25585T C29870A >MT482148 EPI_ISL_437801,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0168/2020,United States / Virginia ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T G8876A C10029T C14408T G20991T A23403G G25563T C25585T >MT482149 EPI_ISL_437802,2020-04-13,SARS-CoV-2/human/USA/VA-DCLS-0169/2020,United States / Virginia ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T TTA20423- G20991T A23403G G25563T C25585T G26062T AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT496972 EPI_ISL_444467,2020-04-29,SARS-CoV-2/human/IND/GBRC36/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T T17574A C18877T C21365T A23403G G25563T G25621T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496973 EPI_ISL_444468,2020-04-29,SARS-CoV-2/human/IND/GBRC37/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T G840A C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496974 EPI_ISL_444469,2020-04-29,SARS-CoV-2/human/IND/GBRC38/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T G16078A C18877T C22444T G23311T A23403G G25563T G25819T C26735T C28854T C29358T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496975 EPI_ISL_444470,2020-04-29,SARS-CoV-2/human/IND/GBRC39/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T AA10478CT C14408T C18877T A23403G G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496976 EPI_ISL_447030,2020-05-03,SARS-CoV-2/human/IND/GBRC56a/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C8683T G12806A C14408T G21600T A23403G G28845T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496977 EPI_ISL_447031,2020-05-03,SARS-CoV-2/human/IND/GBRC56b/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496978 EPI_ISL_447032,2020-05-03,SARS-CoV-2/human/IND/GBRC57/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T A6531C G9479T C14408T A23403G ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT496979 EPI_ISL_447042,2020-05-03,SARS-CoV-2/human/IND/GBRC66/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T G16853T C18877T A23403G G24197T G25563T C26735T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT496980 EPI_ISL_447033,2020-05-03,SARS-CoV-2/human/IND/GBRC58/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T G21724T C22444T A23403G G25563T C26735T G28083T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496981 EPI_ISL_447034,2020-05-03,SARS-CoV-2/human/IND/GBRC59/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCA1- C241T C3037T C14408T G16078A C18877T T20151C TT21542AA C22444T G23311T A23403G G25563T C26735T C28854T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT496982 EPI_ISL_447035,2020-05-03,SARS-CoV-2/human/IND/GBRC60/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T C23277T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496983 EPI_ISL_447043,2020-05-03,SARS-CoV-2/human/IND/GBRC67a/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T G12149A C14408T G16078A C18877T T20151C C22444T G23311T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496984 EPI_ISL_447036,2020-05-03,SARS-CoV-2/human/IND/GBRC61/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T ATAGTT6510- C14408T C18877T A23403G G25563T C26735T C26895T C29177T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496985 EPI_ISL_447044,2020-05-03,SARS-CoV-2/human/IND/GBRC67b/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T G16078A C18877T T20151C C22444T G23311T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496986 EPI_ISL_447045,2020-05-03,SARS-CoV-2/human/IND/GBRC68/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C6402T C14408T C18877T C22444T A23403G G25563T C26735T G28631A C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496987 EPI_ISL_447046,2020-05-04,SARS-CoV-2/human/IND/GBRC69/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18441T C18877T G21724T C22444T G22973C A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496988 EPI_ISL_447037,2020-05-03,SARS-CoV-2/human/IND/GBRC62/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T G9802T T11107C C14408T C18877T A23403G G24872T G25563T C26735T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496989 EPI_ISL_447038,2020-05-03,SARS-CoV-2/human/IND/GBRC63/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1191T C3037T C14408T T21568A A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496990 EPI_ISL_447047,2020-04-29,SARS-CoV-2/human/IND/GBRC70/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T A23403G GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496991 EPI_ISL_447048,2020-04-27,SARS-CoV-2/human/IND/GBRC71/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T G15444T C18877T G20433T C22444T A23403G G25563T C26735T C27527T G28077T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496992 EPI_ISL_447039,2020-05-03,SARS-CoV-2/human/IND/GBRC64/2020,India / Gujarat / Ahmedabad ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T C18877T C22444T A23403G G25563T C26735T C27612T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496993 EPI_ISL_447049,2020-04-29,SARS-CoV-2/human/IND/GBRC72a/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T G16078A C18877T C22444T A23403G G23678T G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496994 EPI_ISL_447050,2020-04-29,SARS-CoV-2/human/IND/GBRC72b/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T G16078A C18877T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496995 EPI_ISL_447051,2020-04-29,SARS-CoV-2/human/IND/GBRC73/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C2836T C3037T C14408T G16078A C18877T C22444T A23403G G25563T C26735T C28854T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496996 EPI_ISL_447052,2020-05-02,SARS-CoV-2/human/IND/GBRC74/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T T20063C A23403G C23638T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT496997 EPI_ISL_447053,2020-04-29,SARS-CoV-2/human/IND/GBRC75/2020,India / Gujarat / Gandhinagar ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C3037T C14408T G16852T C18877T G19417T G19872T A23403G G25563T C26735T C28948T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT499171 EPI_ISL_450445,2020-03-30,SARS-CoV-2/human/USA/CA-CZB-1196/2020,United States / California / Santa Clara County ATTAAAGGTTT1- C241T C2113T C3037T C7765T C14408T C17690T C18877T A23403G G25563T >MT499172 EPI_ISL_450446,2020-03-30,SARS-CoV-2/human/USA/CA-CZB-1197/2020,United States / California / Santa Clara County ATTAAAG1- C241T C1059T C3037T C14408T A23403G G25563T >MT499173 EPI_ISL_450447,2020-03-29,SARS-CoV-2/human/USA/CA-CZB-1198/2020,United States / California / Santa Clara County C241T C3037T G8174R C14408T C18877T A23403G G25563T GACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29868- >MT499174 EPI_ISL_450448,2020-03-29,SARS-CoV-2/human/USA/CA-CZB-1199/2020,United States / California / Santa Clara County ATTAAAGGTTT1- G3113C G11083T C14805T T17247C G26144T AAAAAAAAAAAAAAAAA29887- >MT499175 EPI_ISL_450449,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1200/2020,United States / California / Santa Clara County ATTAAAG1- C241T C3037T C14408T A20268G A23403G >MT499176 EPI_ISL_450450,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1201/2020,United States / California / Santa Clara County A1- C241T C1059T C3037T C14408T A23403G G25563T >MT499177 EPI_ISL_450451,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1202/2020,United States / California / Santa Clara County ATTA1- C241T G1719A C3037T C14408T G18984T C19170T G19509A A23403G G28077T GGG28881AAC >MT499178 EPI_ISL_450452,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1203/2020,United States / California / Santa Clara County ATTAAAGGTTTA1- C241T A570G C1059T C3037T C14408T A23403G G25563T C29274Y AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT499179 EPI_ISL_450453,2020-04-09,SARS-CoV-2/human/USA/CA-CZB-1204/2020,United States / California / Santa Clara County ATTAAAGGTTTATAC1- C241T C1059T C3037T C7528T C14408T A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499180 EPI_ISL_450454,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1205/2020,United States / California / Santa Clara County ATTAAAGG1- C241T C3037T T9172C A10948G C14408T A23403G G26730T GGG28881AAC >MT499181 EPI_ISL_450455,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1206/2020,United States / California / Santa Clara County ATTAAAGGTTTAT1- C241T C3037T C14408T A20268G A23403G AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29872- >MT499182 EPI_ISL_450456,2020-03-27,SARS-CoV-2/human/USA/CA-CZB-1207/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTT1- GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499183 EPI_ISL_450457,2020-03-23,SARS-CoV-2/human/USA/CA-CZB-1208/2020,United States / California / Santa Clara County A1- C8782T C17747T A17858G C18060T T18411C T28144C >MT499184 EPI_ISL_450458,2020-03-27,SARS-CoV-2/human/USA/CA-CZB-1209/2020,United States / California / Santa Clara County ATTAAAGGTT1- >MT499185 EPI_ISL_450459,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1210/2020,United States / California / Santa Clara County ATTAAAGGTTT1- C241T C3037T C14408T G22021T A23403G GGG28881AAC >MT499186 EPI_ISL_450460,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1211/2020,United States / California / Santa Clara County ATTA1- C900T G11083T C14805T T17247C C21575T G26144T >MT499187 EPI_ISL_450461,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1212/2020,United States / California / Santa Clara County ATTAAAGGTTTATAC1- A21626G G29711T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499188 EPI_ISL_450462,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1213/2020,United States / California / Santa Clara County ATTAAAGGTTT1- C241T C1059T C2980T C3037T C3096T A8882G C14408T C17125T A23403G G25563T C25587T >MT499189 EPI_ISL_450463,2020-03-25,SARS-CoV-2/human/USA/CA-CZB-1214/2020,United States / California / Santa Clara County ATT1- C241T C1059T C2980T C3037T C3096T A8882G C14408T C17125T A23403G G25563T C25587T >MT499190 EPI_ISL_450464,2020-04-07,SARS-CoV-2/human/USA/CA-CZB-1215/2020,United States / California / Santa Clara County ATTA1- T606C G1440A G2891A C7011T C18796T T21144C G28812T >MT499191 EPI_ISL_450465,2020-03-24,SARS-CoV-2/human/USA/CA-CZB-1216/2020,United States / California / Santa Clara County ATTAAAGGTT1- C241T C1059T C3037T C14408T A21562G A23403G G25563T >MT499192 EPI_ISL_450466,2020-03-24,SARS-CoV-2/human/USA/CA-CZB-1217/2020,United States / California / Santa Clara County ATTA1- C241T C3037T C14408T G22021T A23403G GGG28881AAC AAAA29900- >MT499193 EPI_ISL_450467,2020-03-24,SARS-CoV-2/human/USA/CA-CZB-1218/2020,United States / California / Santa Clara County A1- C241T C1059T C3037T C14408T A23403G G25563T >MT499194 EPI_ISL_450468,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1219/2020,United States / California / Santa Clara County ATTAAAGGTTTATAC1- C14262T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499195 EPI_ISL_450469,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1220/2020,United States / California / Santa Clara County ATTAAAGGTT1- C241T C1059T C3037T C14408T A23403G G25563T >MT499196 EPI_ISL_450470,2020-03-22,SARS-CoV-2/human/USA/CA-CZB-1221/2020,United States / California / Santa Clara County ATTAAAGGTTTATACC1- C241T C3037T T11566A C14408T A23403G GGG28881AAC GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499197 EPI_ISL_450471,2020-03-21,SARS-CoV-2/human/USA/CA-CZB-1222/2020,United States / California / Santa Clara County ATTAAAGGTTTATAC1- C16887T C17634A GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499198 EPI_ISL_450472,2020-04-04,SARS-CoV-2/human/USA/CA-CZB-1223/2020,United States / California / Santa Clara County AT1- G1467A A13419T C26032T C27131T G29711T >MT499199 EPI_ISL_450473,2020-03-21,SARS-CoV-2/human/USA/CA-CZB-1224/2020,United States / California / Santa Clara County ATTAAAGGT1- C8782T C17747T A17858G C18060T T28144C >MT499200 EPI_ISL_450474,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1225/2020,United States / California / Santa Clara County ATTAAAGGTTT1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAAAAAAAAAAAAAAAAAAA29875- >MT499201 EPI_ISL_450475,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1226/2020,United States / California / Santa Clara County A1- G29711T >MT499202 EPI_ISL_450476,2020-03-26,SARS-CoV-2/human/USA/CA-CZB-1227/2020,United States / California / Santa Clara County ATTAAAGGTTTATACCTTCCCAGGT1- C241T C1059T A1123G C1887T C3037T T4658W C14408T A17464R A17615G A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499203 EPI_ISL_450477,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1228/2020,United States / California / Santa Clara County C2676T C8782T A22606T T28144C G28878A G29742A >MT499204 EPI_ISL_450478,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-1229/2020,United States / California / Santa Clara County C241T C1059T C3037T C14408T C17104T A23403G G25563T >MT499205 EPI_ISL_450479,2020-03-20,SARS-CoV-2/human/USA/CA-CZB-1230/2020,United States / California / Santa Clara County C241T C1059T C3037T C6258T C14408T A23403G G25563T C29253T >MT499206 EPI_ISL_450480,2020-04-03,SARS-CoV-2/human/USA/CA-CZB-1231/2020,United States / California / Santa Clara County A1- C6312A G11083T C13730T C23929T C28311T >MT499207 EPI_ISL_450481,2020-03-19,SARS-CoV-2/human/USA/CA-CZB-1232/2020,United States / California / Santa Clara County ATTAAAGGTTTATAC1- C241T C1059T C3037Y C14408T C21575T A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT499208 EPI_ISL_450338,2020-04-11,SARS-CoV-2/human/POL/IHG_PAS_1_77/2020,Poland / Wielkopolskie C241T C3037T C3653T G5572A C14408T C19488T A23403G T26780C GGG28881AAC AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29874- >MT499209 EPI_ISL_450294,2020-04-11,SARS-CoV-2/human/POL/IHG_PAS_1_69/2020,Poland / Wielkopolskie C241T C3037T C3653T G5572A G9176A C14408T C19488T A23403G GGG28881AAC >MT499210 EPI_ISL_450295,2020-04-11,SARS-CoV-2/human/POL/IHG_PAS_1_73/2020,Poland / Wielkopolskie C241T C3037T C3653T G5572A G9176A C14408T C19488T A23403G GGG28881AAC AAAA29900- >MT499215 EPI_ISL_463001,2020-03-18,SARS-CoV-2/human/TUN/COV0010-12/2020,Tunisia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1----------------------------------------C A361G T5557C A8658G C8782T C13495T G22468T T28144C G28878A AGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29687- >MT499216 EPI_ISL_463002,2020-03-28,SARS-CoV-2/human/TUN/COV0880/2020,Tunisia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C228T G1397A G4288T C8655T A8658G G9479T A9514G G10046A G11083T A12555C T22397A A25411C G26720C T26790C T28688C T28835C TTCCGTTTACGATATATAGTCTACTCTTGTGCAGAATGAATTCTCGTAACTACATAGCACAAGTAGATGTAGTTAACTTTAATCTCACATAGCAATCTTTAATCAGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29583- >MT499217 EPI_ISL_463003,2020-03-30,SARS-CoV-2/human/TUN/COV1339/2020,Tunisia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1---------------------------------------AC C241T C2113T C3037T C7765T A8658G G8781A C14408T C16178T C17690T C18877T G19525T C22210T G22424A T22435C A22503G A23403G G25563T AGTGTGTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29687- >MT499218 EPI_ISL_463004,2020-04-01,SARS-CoV-2/human/TUN/COV1663/2020,Tunisia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T41C C241T C3037T G3896T C7420T A11935C C14408T C15324T G18523T C20032T C21648T A23403G T29811C A29813G T29817G T29822C A29824C TAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29826- >MT499219 EPI_ISL_463005,2020-03-27,SARS-CoV-2/human/TUN/COV0425/2020,Tunisia ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1---------------------------------------AC C241T C2416T C3037T G8371T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT499220 EPI_ISL_463006,2020-03-31,SARS-CoV-2/human/TUN/COV1482/2020,Tunisia ATTAAAGGTTTA1- T17C C241T C1059T T1666C C3037T C14408T A23403G G25563T GG28346TT T29811C A29813G T29817G T29822C A29824C CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT500122 EPI_ISL_451958,2020-03-16,SARS-CoV-2/human/PAK/KHI1/2020,Pakistan / Karachi ATTAAAGGTTTATAC1- ATG1605- C1912T C10582T C26022T CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT502774 EPI_ISL_450341,2020-05-13,SARS-CoV-2/Human/BGD/BARJ_CVASU_CTG_503/2020,Bangladesh / Chattogram ATTAAAGGTTT1- C601T C8782T A10329G C15324T G22468T T28144C G28878A G29392T G29742A AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29871- >MT506199 EPI_ISL_450570,2020-03-10,SARS-CoV-2/human/USA/MI-MDHHS-SC20359/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C4002T C5175T G10097A C13536T C14408T A23403G C23731T G27390S GGG28881AAC AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506200 EPI_ISL_450571,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20360/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506201 EPI_ISL_450572,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20361/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C1059T C3037T C14408T A23403G G25563T AAAAAAAAAAAA29892- >MT506202 EPI_ISL_450573,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20362/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T G1433R C3037T C14408T A23403G G25563T C27575Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506203 EPI_ISL_450574,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20363/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T G960A C1059T C3037T C4202T C14408T T16659Y A23403G G25563T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT506204 EPI_ISL_450575,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20364/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T G27870K G28917K CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT506205 EPI_ISL_450576,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20365/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT506206 EPI_ISL_450577,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20366/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTT1- C241T C1059T C3037T G4422A C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT506207 EPI_ISL_450578,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20367/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C8299Y C12754Y C14408T G21225R A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506208 EPI_ISL_450579,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20368/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29809- >MT506209 EPI_ISL_450580,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20369/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACT1- C241T C1059T C3037T C14408T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT506210 EPI_ISL_450584,2020-03-13,SARS-CoV-2/human/USA/OH-MDHHS-SC20370/2020,United States / Ohio ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTC1- C241T C3037T C14408T A20268G A23403G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT506211 EPI_ISL_450581,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20371/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT506212 EPI_ISL_450582,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20372/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29827- >MT506213 EPI_ISL_450583,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20373/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T A6551G C8782T T18736C C24034T T26729C G28077C T28144C A29700G CATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29838- >MT506214 EPI_ISL_450585,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20374/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1441T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506215 EPI_ISL_450586,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20375/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T T6407C C14408T A23403G G25563T C27371T C27847T AAAAAAAAAAAAAAAAAAAA29884- >MT506216 EPI_ISL_450587,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20376/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T6905G C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506217 EPI_ISL_450588,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20377/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506218 EPI_ISL_450589,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20378/2020,United States / Michigan ATTAAAGGTTTATACCT1- C241T C1059T C3037T C14408T A23403G G25563T TAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29699- >MT506219 EPI_ISL_450590,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20379/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C6638T C14408T A23403G G25563T A28174C C28432T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506220 EPI_ISL_450591,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20380/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A9328R C14408T A23403G G25563T C25976M AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506221 EPI_ISL_450592,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20381/2020,United States / Michigan ATTAAAGGTTTA1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506222 EPI_ISL_450593,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20382/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C3261T C14408T C21221M A23403G G25563T AAAAAAAA29896- >MT506223 EPI_ISL_450594,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20383/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A5011M C14408T A23403G G25563T C27584Y TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT506224 EPI_ISL_450595,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20384/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A3742R C6525Y T6905G C10969Y C14408T C14703M G21986R A23403G G25563T C28291Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506225 EPI_ISL_450596,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20385/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C26111Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506226 EPI_ISL_450597,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20386/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506227 EPI_ISL_450598,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20387/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G22484C A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506228 EPI_ISL_450599,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20388/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C21230Y A23403G G25456K G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506229 EPI_ISL_450600,2020-04-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20389/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506526 EPI_ISL_447106,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20309/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506527 EPI_ISL_447097,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20300/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T A23403G T27766Y AGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29824- >MT506528 EPI_ISL_447111,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20314/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- G9928K G11083T C14805T T17247C C26060Y G26144T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506529 EPI_ISL_447116,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20319/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C4206T C14408T C21767Y A23403G G25563T C27964T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506530 EPI_ISL_447059,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20260/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C1059T C3037T A5011M C14408T A23403G G25563T TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT506531 EPI_ISL_447096,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20299/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT506532 EPI_ISL_447089,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20292/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C16428T A23403G G25563T TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT506533 EPI_ISL_447107,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20310/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- TTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29846- >MT506534 EPI_ISL_447093,2020-03-14,SARS-CoV-2/human/USA/MI-MDHHS-SC20296/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- A6459R ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506535 EPI_ISL_447101,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20304/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT506536 EPI_ISL_447114,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20317/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C233Y C241T C1059T C3037T C8637A C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT506537 EPI_ISL_447092,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20295/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGG1- C64T C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506538 EPI_ISL_447060,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20261/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506539 EPI_ISL_447091,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20294/2020,United States / Michigan ATTAAAGGTTTATACCTT1- C241T C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506540 EPI_ISL_447094,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20297/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT506541 EPI_ISL_447072,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20274/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAAC1- C241T C1059T C3037T C14177T C14408T A23403G G25563T TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT506542 EPI_ISL_447103,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20306/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C28748T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506543 EPI_ISL_447057,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20192/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCG1- C241T C1059T C3037T A5011M C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506544 EPI_ISL_447117,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20320/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C12525Y C14408T A23403G G25563T ATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29839- >MT506545 EPI_ISL_447099,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20302/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C241T C1059T C3037T T12955Y C14408T A23403G C23664T G25563T TGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29829- >MT506546 EPI_ISL_447118,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20321/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T A5011M C8772Y C10582Y C14408T A23403G G25563T G29402T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT506547 EPI_ISL_447062,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20263/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25672Y G25696R C25976A G26143K A27611R CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506548 EPI_ISL_447078,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20280/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C5365Y C14408T T19487W G21451R A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506549 EPI_ISL_447069,2020-03-25,SARS-CoV-2/human/USA/MI-MDHHS-SC20271/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T G27777T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506550 EPI_ISL_447095,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20298/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C7164T C8802Y C14408T A23403G G25563T ATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29850- >MT506551 EPI_ISL_447085,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20287/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506552 EPI_ISL_447067,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20269/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G4720A C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506553 EPI_ISL_447079,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20281/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T G25567R GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT506554 EPI_ISL_447061,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20262/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C703T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506555 EPI_ISL_447074,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20276/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C15216T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506556 EPI_ISL_447071,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20273/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T G19419S A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506557 EPI_ISL_447076,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20278/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T T18783Y A23403G G25563T C25976M G28882R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506558 EPI_ISL_447066,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20268/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C22482T C23277T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506559 EPI_ISL_447081,2020-03-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20283/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506560 EPI_ISL_447063,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20264/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A5011M C14408T G19900A A23403G G25563T C25710Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506561 EPI_ISL_447083,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20285/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T A17929G A23403G G25563T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT506562 EPI_ISL_447086,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20288/2020,United States / Michigan ATTAAAGGTTTATACCTT1- C241T C1059T C3037T T11515G C13050Y C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506563 EPI_ISL_447084,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20286/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T G26526T G27240T AAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29812- >MT506564 EPI_ISL_447087,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20290/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T T833C C1059T C3037T T7202C C14408T A23403G T23590A G25563T C27964T TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT506565 EPI_ISL_447090,2020-04-01,SARS-CoV-2/human/USA/MI-MDHHS-SC20293/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C17474T C18877T C23373Y A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506566 EPI_ISL_447105,2020-04-02,SARS-CoV-2/human/USA/MI-MDHHS-SC20308/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C180T C241T C1059T C3037T C14408T C14422T A23403G G25563T G28314A TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT506567 EPI_ISL_447113,2020-04-02,SARS-CoV-2/human/USA/MI-MDHHS-SC20316/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2862T C3037T A5011M C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506568 EPI_ISL_447068,2020-04-02,SARS-CoV-2/human/USA/MI-MDHHS-SC20270/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2862T C3037T A5011M C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506569 EPI_ISL_447102,2020-04-02,SARS-CoV-2/human/USA/MI-MDHHS-SC20305/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506570 EPI_ISL_447064,2020-04-03,SARS-CoV-2/human/USA/MI-MDHHS-SC20266/2020,United States / Michigan ATTAAAGG1- C241T C1059T C3037T C4582T A5011M C6606T C14408T G18214R A23403G G25563T TGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29840- >MT506571 EPI_ISL_447098,2020-04-03,SARS-CoV-2/human/USA/MI-MDHHS-SC20301/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C8367T C14262T C14408T A23403G G25563T C27847T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT506572 EPI_ISL_447104,2020-04-03,SARS-CoV-2/human/USA/MI-MDHHS-SC20307/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C4582T A5011M C6606T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506573 EPI_ISL_447088,2020-04-03,SARS-CoV-2/human/USA/MI-MDHHS-SC20291/2020,United States / Michigan ATTAAAGGTTT1- C241T G960R C1059T C3037T C4202T C11941T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506574 EPI_ISL_447109,2020-04-04,SARS-CoV-2/human/USA/MI-MDHHS-SC20312/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C17440Y C23277T A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506575 EPI_ISL_447112,2020-04-04,SARS-CoV-2/human/USA/MI-MDHHS-SC20315/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C29370Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506576 EPI_ISL_447110,2020-04-04,SARS-CoV-2/human/USA/MI-MDHHS-SC20313/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C2416T C3037T A5890T C14408T C16869T A23403G G25563T G26233T C27881T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT506577 EPI_ISL_447100,2020-04-03,SARS-CoV-2/human/USA/MI-MDHHS-SC20303/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C3464T C14408T G19525K A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506578 EPI_ISL_447108,2020-04-06,SARS-CoV-2/human/USA/MI-MDHHS-SC20311/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2841T C3037T A5011R C7765Y C14408T C15017T A17233C A23403G G25563T TAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29848- >MT506579 EPI_ISL_447058,2020-04-06,SARS-CoV-2/human/USA/MI-MDHHS-SC20217/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T G27463R AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506580 EPI_ISL_447082,2020-04-06,SARS-CoV-2/human/USA/MI-MDHHS-SC20284/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C19366Y A23403G G25563T C27532A ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506581 EPI_ISL_447115,2020-04-06,SARS-CoV-2/human/USA/MI-MDHHS-SC20318/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T A23403G G25563T C25976A TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506582 EPI_ISL_447077,2020-04-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20279/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C5183T G11083T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506583 EPI_ISL_447075,2020-04-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20277/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C12120T C14408T G16846T A23403G G25563T C27145T C27847T TATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29832- >MT506584 EPI_ISL_447080,2020-04-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20282/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2862T C3037T A5011M C14408T A23403G G25563T A27756R TTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29845- >MT506585 EPI_ISL_447073,2020-04-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20275/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T CTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29857- >MT506586 EPI_ISL_447070,2020-04-27,SARS-CoV-2/human/USA/MI-MDHHS-SC20272/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C5878T G11083T C14408T C17002T A23403G G25563T GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT506587 EPI_ISL_447065,2020-04-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20267/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T T15087C C21855T A23403G A24670G G25563T G28509C GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT506636 EPI_ISL_447187,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20216/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C8476T C8782T T9477A C14805T G25979T T28144C C28657T C28863T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506637 EPI_ISL_447227,2020-03-12,SARS-CoV-2/human/USA/MI-MDHHS-SC20257/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T TTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29847- >MT506638 EPI_ISL_447180,2020-03-16,SARS-CoV-2/human/USA/MI-MDHHS-SC20209/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G A24287R G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506639 EPI_ISL_447191,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20221/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C9891Y C11518Y C14408T C19454Y A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506640 EPI_ISL_447218,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20248/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506641 EPI_ISL_447169,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20198/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C207Y C241T C1059T G1747R C3037T C14408T A23403G G25563T G27717K TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506642 EPI_ISL_447194,2020-03-15,SARS-CoV-2/human/USA/MI-MDHHS-SC20224/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C664Y C1059T C3037T C14408T C15216T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506643 EPI_ISL_447177,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20206/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506644 EPI_ISL_447183,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20212/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506645 EPI_ISL_447186,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20215/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506646 EPI_ISL_447188,2020-03-13,SARS-CoV-2/human/USA/MI-MDHHS-SC20218/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C8326Y C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506647 EPI_ISL_447214,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20244/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T A1819G C3037T C14408T A18474R C20081Y A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506648 EPI_ISL_447206,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20236/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506649 EPI_ISL_447200,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20230/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A14224R C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506650 EPI_ISL_447228,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20258/2020,United States / Michigan ATTAAAGGTTTATACCTT1- C241T C3037T C14408T C18877T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506651 EPI_ISL_447175,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20204/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506652 EPI_ISL_447196,2020-03-17,SARS-CoV-2/human/USA/MI-MDHHS-SC20226/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACC1- C241T C1059T C3037T C14408T A23403G G25563T A27151R AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506653 EPI_ISL_447166,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20195/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T T28897Y ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506654 EPI_ISL_447221,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20251/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C27005T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506655 EPI_ISL_447198,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20228/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T T7098K C14408T C18877T A23403G A24862W G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506656 EPI_ISL_447170,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20199/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T GATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29843- >MT506657 EPI_ISL_447192,2020-03-18,SARS-CoV-2/human/USA/MI-MDHHS-SC20222/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T C8782T T18736C A22003R C24034T T26729C G28077C T28144C A29700G AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506658 EPI_ISL_447215,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20245/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C19118T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506659 EPI_ISL_447179,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20208/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- A97G C241T C1059T C3037T A5011M C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506660 EPI_ISL_447178,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20207/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506661 EPI_ISL_447208,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20238/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1441T C3037T C14408T G22316A A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506662 EPI_ISL_447199,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20229/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C337Y C1059T C3037T T5359Y A6063M C14408T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506663 EPI_ISL_447167,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20196/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506664 EPI_ISL_447197,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20227/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T C29370Y AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506665 EPI_ISL_447201,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20231/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A G922A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506666 EPI_ISL_447193,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20223/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T G11083T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506667 EPI_ISL_447225,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20255/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T T6905G C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506668 EPI_ISL_447174,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20203/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506669 EPI_ISL_447164,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20193/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14322T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506670 EPI_ISL_447216,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20246/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T A2863G C3037T C10156T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506671 EPI_ISL_447182,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20211/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2536T C3037T C14408T C16393Y A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506672 EPI_ISL_447171,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20200/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C2723T C3037T C11866T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506673 EPI_ISL_447181,2020-03-20,SARS-CoV-2/human/USA/MI-MDHHS-SC20210/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506674 EPI_ISL_447207,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20237/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506675 EPI_ISL_447163,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20191/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506676 EPI_ISL_447195,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20225/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T G26951T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506677 EPI_ISL_447220,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20250/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C2862T C3037T A5011M C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506678 EPI_ISL_447217,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20247/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C3037T C14408T C18877T A19338R C20117Y A23403G G25563T C28791Y AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506679 EPI_ISL_447165,2020-03-21,SARS-CoV-2/human/USA/MI-MDHHS-SC20194/2020,United States / Michigan ATTAAAGG1- C241T C1059T C3037T C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506680 EPI_ISL_447173,2020-03-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20202/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- T490A G922A C3177T C8782T T18736C C19118Y A22003G C24034T T26729C G28077C T28144C A29700G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506681 EPI_ISL_447212,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20242/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- T490A G922A C3177T C8782T T18736C C24034T T26729C G28077C T28144C A29700G AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506682 EPI_ISL_447222,2020-03-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20252/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506683 EPI_ISL_447209,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20239/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T C18795T A23403G G25563T G28392K AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506684 EPI_ISL_447213,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20243/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T A11341C C14408T A23403G G25563T CTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29854- >MT506685 EPI_ISL_447168,2020-03-23,SARS-CoV-2/human/USA/MI-MDHHS-SC20197/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506686 EPI_ISL_447223,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20253/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C900T C1059T C3037T C14408T A23403G G25563T GCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29853- >MT506687 EPI_ISL_447211,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20241/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T C17550T A23403G G25563T TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506688 EPI_ISL_447202,2020-03-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20232/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A5011M G7071R C14408T A23403G G25563T A27677R T27722W AAAAAAAA29896- >MT506689 EPI_ISL_447184,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20213/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C1380T C3037T T10732W C14408T A23403G G25563T C26936Y TTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29855- >MT506690 EPI_ISL_447189,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20219/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506691 EPI_ISL_447204,2020-03-28,SARS-CoV-2/human/USA/MI-MDHHS-SC20234/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C4582T A5011M T6668C C14408T A23403G G25563T C28519T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506692 EPI_ISL_447203,2020-03-29,SARS-CoV-2/human/USA/MI-MDHHS-SC20233/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A6646R C14408T G18363R A23403G G25563T TGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29842- >MT506693 EPI_ISL_447229,2020-03-26,SARS-CoV-2/human/USA/MI-MDHHS-SC20259/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T T15354C C18877T A23403G G25563T C29077T GGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29861- >MT506694 EPI_ISL_447172,2020-03-30,SARS-CoV-2/human/USA/MI-MDHHS-SC20201/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T C3037T C14408T A23403G G25563T C25976A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506695 EPI_ISL_447224,2020-04-08,SARS-CoV-2/human/USA/MI-MDHHS-SC20254/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C241T C1059T C3037T C11916T C14408T C18998T A20553G A23403G G25563T C27874T G29540A AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506696 EPI_ISL_447190,2020-04-19,SARS-CoV-2/human/USA/MI-MDHHS-SC20220/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C829T C1059T C3037T C14408T C16260T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506697 EPI_ISL_447219,2020-04-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20249/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C13862T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506698 EPI_ISL_447185,2020-04-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20214/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T A23403G C25665Y G28325T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506699 EPI_ISL_447226,2020-04-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20256/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T C9924T C14408T C21595T A23403G C23934T G24620T G25563T C25976A AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506700 EPI_ISL_447205,2020-04-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20235/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCA1- C241T C1059T A1622G C3037T C13862T C14408T A23403G G25563T >MT506701 EPI_ISL_447210,2020-04-22,SARS-CoV-2/human/USA/MI-MDHHS-SC20240/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T A1622G C3037T C13862T C14408T A23403G G25563T AGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29852- >MT506702 EPI_ISL_447176,2020-04-24,SARS-CoV-2/human/USA/MI-MDHHS-SC20205/2020,United States / Michigan ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C1059T C3037T A5011M C5833A C7279T C14408T A21222R A23403G G25563T ATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29844- >MT506707 ,2020-03-31,SARS-CoV-2/human/USA/COVID19-AK087/2020,United States ATTAAAGGTTTATACCTTCC1- C241T C1059T C3037T T6778W T7082Y C14006A C14408T A23403G C23423T G25563T G28044T >MT506885 EPI_ISL_450700,2020-03-16,SARS-CoV-2/human/USA/WI-UW-20/2020,United States / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T T6814C G11083T C14408T G22203T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506886 EPI_ISL_450701,2020-04-18,SARS-CoV-2/human/USA/WI-UW-347/2020,United States / Oregon / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T A8972G C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506887 EPI_ISL_450702,2020-04-15,SARS-CoV-2/human/USA/WI-UW-348/2020,United States / Dane County / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T T15354C C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506888 ,2020-04-15,SARS-CoV-2/human/USA/WI-UW-349/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- T490A C3177T C8782T C15868T T18736C A22922C C24034T T26729C C27635T G28077C T28144C A29567C A29700G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506889 ,2020-04-18,SARS-CoV-2/human/USA/WI-UW-350/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T A696C C3037T G3871T T3931C C14408T A23403G C28977T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506890 EPI_ISL_450705,2020-04-14,SARS-CoV-2/human/USA/WI-UW-351/2020,United States / Madison / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G11417T T14073C C14408T A23403G A23947G G29254T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506891 ,2020-04-18,SARS-CoV-2/human/USA/WI-UW-352/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T T15354C C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506893 EPI_ISL_450708,2020-04-01,SARS-CoV-2/human/USA/WI-UW-354/2020,United States / Dane County / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G11083T C14408T C15324T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506894 ,2020-04-17,SARS-CoV-2/human/USA/WI-UW-355/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C7081T C10319T T12037C C14408T T16047C A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506895 EPI_ISL_450710,2020-04-14,SARS-CoV-2/human/USA/WI-UW-356/2020,United States / Mount Horeb / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C3037T C14408T A23403G G25563T C27964T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506896 ,2020-04-14,SARS-CoV-2/human/USA/WI-UW-357/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T A696C C3037T G3871T T3931C C14408T A23403G C28977T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506897 ,2020-04-15,SARS-CoV-2/human/USA/WI-UW-358/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T C2003T C3037T C9924T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506898 EPI_ISL_450713,2020-04-18,SARS-CoV-2/human/USA/WI-UW-359/2020,United States / Verona / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G3871T C5869T C14408T T17154C A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506899 ,2020-04-18,SARS-CoV-2/human/USA/WI-UW-360/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T T15354C C18877T A23403G G25563T G28798A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506900 ,2020-04-18,SARS-CoV-2/human/USA/WI-UW-361/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T T15354C C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506901 EPI_ISL_450716,2020-04-17,SARS-CoV-2/human/USA/WI-UW-362/2020,United States / Mount Horeb / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G3994T G12052T C14408T C15324T G19414T A23403G C24503T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506902 ,2020-04-17,SARS-CoV-2/human/USA/WI-UW-363/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T A696C C3037T G3871T T3931C C14408T A23403G C28977T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506903 ,2020-04-16,SARS-CoV-2/human/USA/WI-UW-364/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T T15354C C18877T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506904 ,2020-04-15,SARS-CoV-2/human/USA/WI-UW-365/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T A696C A2550G C3037T G3871T T3931C C14408T A23403G C28977T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506905 ,2020-04-14,SARS-CoV-2/human/USA/WI-UW-366/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T C14408T A23403G T28723C CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506906 EPI_ISL_450721,2020-04-01,SARS-CoV-2/human/USA/WI-UW-367/2020,United States / Dane County / Wisconsin ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C8782T G16381A T17877C C20316T C21707T G25500T C26124T T28144C G28878A G29742A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506907 ,2020-04-14,SARS-CoV-2/human/USA/WI-UW-368/2020,United States / Illinois ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T A696C C3037T G3871T T3931C C14408T C21805T A23403G A26183G C28977T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506974 EPI_ISL_436505,2020-04-05,SARS-CoV-2/human/USA/FL-BPHL-0001/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C3037T C8389T C14408T A23403G T25237A G25563T G27915A GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT506975 EPI_ISL_436506,2020-04-05,SARS-CoV-2/human/USA/FL-BPHL-0002/2020,United States / Florida A1- C241T C3037T C14408T C18877T A23403G G25563T G27987T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506976 EPI_ISL_436507,2020-04-05,SARS-CoV-2/human/USA/FL-BPHL-0003/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- G174A C241T C1059T C1917T C3037T T8278C C14408T A23403G G25563T >MT506977 EPI_ISL_436508,2020-04-03,SARS-CoV-2/human/USA/FL-BPHL-0004/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- G1021T C8782T G16381A T17877C G25500T T28144C G28878A G29742A TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506978 EPI_ISL_436509,2020-04-05,SARS-CoV-2/human/USA/FL-BPHL-0005/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAA1- C241T C3037T C14408T C14708T A23403G C25350T T29867A >MT506979 EPI_ISL_436510,2020-04-04,SARS-CoV-2/human/USA/FL-BPHL-0006/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- T490A G2436A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT506980 EPI_ISL_436511,2020-04-04,SARS-CoV-2/human/USA/FL-BPHL-0007/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- T490A G2436A C3177T C6040T C8782T G12478A T18736C C24034T T26729C G28077C T28144C C28896G A29700G TAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29859- >MT506981 EPI_ISL_436512,2020-04-03,SARS-CoV-2/human/USA/FL-BPHL-0008/2020,United States / Florida AT1- C241T C2416T C3037T C12513T C14408T G22661T A23403G G25563T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506982 EPI_ISL_436513,2020-04-04,SARS-CoV-2/human/USA/FL-BPHL-0009/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C241T C3037T C7420T C14408T C14898T G15937A A23403G C24023T G29734C TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867A- >MT506983 EPI_ISL_436514,2020-04-06,SARS-CoV-2/human/USA/FL-BPHL-0010/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C1059T T7980C A12960G C14408T A23403G G25563T C26873T AATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29849- >MT506984 EPI_ISL_436515,2020-04-04,SARS-CoV-2/human/USA/FL-BPHL-0011/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C14408T G15243T G15906T A23403G G25563T G29688T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506985 EPI_ISL_436516,2020-04-04,SARS-CoV-2/human/USA/FL-BPHL-0012/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- T490A C3177T C8782T A13498G T18736C C24034T T26729C C26735T G28077C T28144C A29567C A29700G ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT506986 EPI_ISL_436517,2020-04-08,SARS-CoV-2/human/USA/FL-BPHL-0013/2020,United States / Florida ATTAAAGGTT1- C241T C1059T C3037T C10188T C12534T C14408T G22484T A23403G T24982C G25563T C27964T G28321T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506987 EPI_ISL_436518,2020-04-08,SARS-CoV-2/human/USA/FL-BPHL-0014/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T A1124C C3037T C14408T A23403G G25563T A26148G AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT506988 EPI_ISL_436519,2020-04-09,SARS-CoV-2/human/USA/FL-BPHL-0015/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T A4386G C10319T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT506989 EPI_ISL_436520,2020-04-09,SARS-CoV-2/human/USA/FL-BPHL-0016/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C3037T C14408T C18877T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT506990 EPI_ISL_436521,2020-04-08,SARS-CoV-2/human/USA/FL-BPHL-0017/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAAC1- C241T C2416T C3037T C11195T C14408T G15202T C22444T A23403G G25563T C26228T GAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29864- >MT506991 EPI_ISL_436522,2020-04-09,SARS-CoV-2/human/USA/FL-BPHL-0018/2020,United States / Florida ATTAAAGGTTTATACCT1- C241T C601T C3037T C8389T C8950T C14408T G19746A T22585C A23403G G25563T G27915A TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867A- >MT506992 EPI_ISL_436523,2020-04-15,SARS-CoV-2/human/USA/FL-BPHL-0019/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C10188T C12534T C14408T G22484T A23403G T24982C G25563T G28321T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT506993 EPI_ISL_436524,2020-04-15,SARS-CoV-2/human/USA/FL-BPHL-0020/2020,United States / Florida ATT1- C241T C2416T C3037T C11195T C14408T G15202T C22444T A23403G G25563T C26228T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT506994 EPI_ISL_436525,2020-04-15,SARS-CoV-2/human/USA/FL-BPHL-0021/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C14408T C21762T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT506995 EPI_ISL_436526,2020-04-15,SARS-CoV-2/human/USA/FL-BPHL-0022/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C11916T C14408T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT506996 EPI_ISL_436527,2020-04-15,SARS-CoV-2/human/USA/FL-BPHL-0023/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C4113T C11916T C14408T G18181A C18998T A23403G G25563T G29540A CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506997 EPI_ISL_436528,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0024/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C1917T C3037T C14408T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT506998 EPI_ISL_436529,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0025/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT506999 EPI_ISL_436530,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0026/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAA1- C241T C1059T C1917T C3037T C14408T A23403G G25563T AGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29863- >MT507000 EPI_ISL_436531,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0027/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C8782T C15194T T16062C C17747T A17858G C18060T T28144C >MT507001 EPI_ISL_436532,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0028/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C14408T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT507002 EPI_ISL_436533,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0029/2020,United States / Florida ATTAAA1- C241T T967C C1059T C3037T C14408T A23403G G25471C G25563T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT507003 EPI_ISL_436534,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0030/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAA1- C241T C1059T C3037T C10319T C14408T T16047C C23243T A23403G G25563T C27964T TGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29867- >MT507004 EPI_ISL_436535,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0031/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C8782T C17747T A17858G C18060T A23403G A23416T T28144C C28717T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT507005 EPI_ISL_436536,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0032/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAAC1- C241T C1059T C3037T C14408T C21762T A23403G G25563T C29259T CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT507006 EPI_ISL_436537,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0033/2020,United States / Florida AT1- C241T C1059T C3037T C14408T A23403G G25563T T29165C ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT507007 EPI_ISL_436538,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0034/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C14408T A23403G G25563T T29165C ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT507008 EPI_ISL_436539,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0035/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAA1- C241T C1059T C3037T C14408T A23403G G25563T ATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29866- >MT507009 EPI_ISL_436540,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0036/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C3037T C14408T C21762T A23403G G25563T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT507010 EPI_ISL_436541,2020-04-16,SARS-CoV-2/human/USA/FL-BPHL-0037/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C3037T T10831A C14408T A23403G GAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29862- >MT507011 EPI_ISL_436542,2020-04-17,SARS-CoV-2/human/USA/FL-BPHL-0038/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACCAACCAACTTTCGATCTCTTGT1- C241T C3037T G7289A C9733T C14408T C21727T A23403G CCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29837- >MT507012 EPI_ISL_436543,2020-04-17,SARS-CoV-2/human/USA/FL-BPHL-0039/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C241T C1059T C1917T C3037T C14408T A23403G G25563T C26549T AATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA29865- >MT507013 EPI_ISL_436544,2020-04-17,SARS-CoV-2/human/USA/FL-BPHL-0040/2020,United States / Florida ATTAAAGGTTTATACCTTCCCAGGTAACAAACC1- C